RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DRP2Q13474 957 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 SH2D4BQ5SQS7 431 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 PPP4R1Q8TF05 950 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 FAM20AQ96MK3 541 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 MT-ND3P03897 115 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 PLS3P13797 630 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 SCP2P22307 547 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 PIP4K2CQ8TBX8 421 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 TDRD3Q9H7E2 651 aaKnown RBP12.39□□□□□ -0.43
VPS33A-201ENST00000267199 KMT5AQ9NQR1 393 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
VPS33A-201ENST00000267199 RIMS1Q86UR5 1692 aaKnown RBP12.39□□□□□ -0.43
VPS33A-201ENST00000267199 hCG_2014768A0A024R1R8 64 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 RAD17O75943 681 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 COPB2P35606 906 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 SPARCL1Q14515 664 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
VPS33A-201ENST00000267199 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 STOML1Q9UBI4 398 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 KCNG1Q9UIX4 513 aa12.39□□□□□ -0.43
VPS33A-201ENST00000267199 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
VPS33A-201ENST00000267199 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 GCLMP48507 274 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 BYSLQ13895 437 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SLITRK6Q9H5Y7 841 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 NOD2Q9HC29 1040 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SSU72P8A0A1W2PR75 194 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 PDHBP11177 359 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SARSP49591 514 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 ZNF543Q08ER8 600 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 IFT122Q9HBG6 1241 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 FGFR1OP2Q9NVK5 253 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 MAP2K7O14733 419 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 PEX3P56589 373 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 HERVK_113P62684 666 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 TMED1Q13445 227 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 TTC1Q99614 292 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SYNGAP1Q96PV0 1343 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 A0A087X0B3 334 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 GOLGA8SH3BPF8 625 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 SAT1P21673 171 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 HSD17B3P37058 310 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 PIK3CAP42336 1068 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 RANBP1P43487 201 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 BPIFB4P59827 614 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 TRPM8Q7Z2W7 1104 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 CASKIN2Q8WXE0 1202 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 RGL1Q9NZL6 768 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 ZFP69BQ9UJL9 534 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 TTLL3Q9Y4R7 772 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
VPS33A-201ENST00000267199 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
VPS33A-201ENST00000267199 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 DCTN3O75935 186 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
VPS33A-201ENST00000267199 SEPT9Q9UHD8 586 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-201ENST00000267199 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 RICTORQ6R327 1708 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 CFAP69A5D8W1 941 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 CCT8L1PA6NM43 557 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 H7C0C1 242 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 MMP10P09238 476 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 BMP6P22004 513 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 ATP5OP48047 213 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
VPS33A-201ENST00000267199 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms