RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SLC7A6OSQ96CW6 309 aaPredicted RBP9.46□□□□□ -0.89
VAPB-201ENST00000265619 TBC1D10AQ9BXI6 508 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 CCDC134Q9H6E4 229 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 INIPQ9NRY2 104 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 SCOCQ9UIL1 159 aa9.46□□□□□ -0.89
VAPB-201ENST00000265619 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.89
VAPB-201ENST00000265619 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
VAPB-201ENST00000265619 KRT36O76013 467 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 HIBADHP31937 336 aaKnown RBP9.46□□□□□ -0.9
VAPB-201ENST00000265619 PDE6CP51160 858 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 TTC38Q5R3I4 469 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 POTEAQ6S8J7 498 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
VAPB-201ENST00000265619 RPTORQ8N122 1335 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 PROM2Q8N271 834 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 ENDOVQ8N8Q3 282 aaKnown RBP9.46□□□□□ -0.9
VAPB-201ENST00000265619 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 TUBGCP5Q96RT8 1024 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 SPATA16Q9BXB7 569 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 ERVK-5Q9HDB9 667 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 ZDHHC18Q9NUE0 388 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 TJP1Q07157 1748 aa9.46□□□□□ -0.9
VAPB-201ENST00000265619 KRIT1O00522 736 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 RGS16O15492 202 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 SUPT3HO75486 399 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 MTMR3Q13615 1198 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 OLFML2BQ68BL8 750 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 SEMA6BQ9H3T3 888 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 RNF14Q9UBS8 474 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 NUP188Q5SRE5 1749 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 PFDN1O60925 122 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 SUN1O94901 812 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 OR6B1O95007 311 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ADD2P35612 726 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ATP2C1P98194 919 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 PDXDC1Q6P996 788 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 VSTM1Q6UX27 236 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 COL23A1Q86Y22 540 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ANKS1AQ92625 1134 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 FMO2Q99518 471 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 TIPINQ9BVW5 301 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 EPB41L4AQ9HCS5 686 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 INTUQ9ULD6 942 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ARL2BPQ9Y2Y0 163 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 DEXIO95424 95 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 PAX3P23760 479 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 PLTPP55058 493 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 POU5F1Q01860 360 aaKnown RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 EVX2Q03828 476 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 LSAMPQ13449 338 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 AUHQ13825 339 aaKnown RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 BTG3Q14201 252 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 RASA3Q14644 834 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 WDR72Q3MJ13 1102 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 CMPK2Q5EBM0 449 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ADGRA1Q86SQ6 560 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 FBXO25Q8TCJ0 367 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 KCNN1Q92952 543 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 TNFRSF25Q93038 417 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 ERP27Q96DN0 273 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 IFT74Q96LB3 600 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 VCXQ9H320 206 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 SAP30BPQ9UHR5 308 aaKnown RBP9.45□□□□□ -0.9
VAPB-201ENST00000265619 CHKBQ9Y259 395 aa9.45□□□□□ -0.9
VAPB-201ENST00000265619 CETN3O15182 167 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 GRIA2P42262 883 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 PMS2P54278 862 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 KLRC3Q07444 240 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 CBX3Q13185 183 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 RPS6KA1Q15418 735 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 LONRF1Q17RB8 773 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 FIGNQ5HY92 759 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 ZDHHC24Q6UX98 284 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 DYDC1Q8WWB3 177 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 NCSTNQ92542 709 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 DTNBP1Q96EV8 351 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 FAM84BQ96KN1 310 aaPredicted RBP9.44□□□□□ -0.9
VAPB-201ENST00000265619 GBP5Q96PP8 586 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 PHF12Q96QT6 1004 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 MIPEPQ99797 713 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 LZTS2Q9BRK4 669 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.44□□□□□ -0.9
VAPB-201ENST00000265619 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 ZMYND12Q9H0C1 365 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 SNX24Q9Y343 169 aa9.44□□□□□ -0.9
VAPB-201ENST00000265619 BTAF1O14981 1849 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms