RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PFASO15067 1338 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ANKRD62A6NC57 917 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 ABLIM1O14639 778 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 EVI5O60447 810 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 PDE6BP35913 854 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 CDK8P49336 464 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 DCAF12L1Q5VU92 463 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 RNF43Q68DV7 783 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 GLT8D2Q9H1C3 349 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 OSGEPQ9NPF4 335 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 TFCP2L1Q9NZI6 479 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 PASKQ96RG2 1323 aa13.36□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 EDIL3O43854 480 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 SKAP2O75563 359 aaPredicted RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 KRT16P08779 473 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 VCAM1P19320 739 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 CTNNA2P26232 953 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 TAF11Q15544 211 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 NUGGCQ68CJ6 796 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 LNX1Q8TBB1 728 aaPredicted RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 CKAP2Q8WWK9 683 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 FGFR1OP2Q9NVK5 253 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 STK38LQ9Y2H1 464 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 NR3C1P04150 777 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 CCNB1P14635 433 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 C11orf63Q6NUN7 778 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 GLYCTKQ8IVS8 523 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 LMNTD2Q8IXW0 634 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 ART4Q93070 314 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 COA7Q96BR5 231 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
CHMP2B-201ENST00000263780 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 A6NHS1 94 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 AKAP3O75969 853 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 SLCO1A2P46721 670 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 NOVP48745 357 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 BMT2Q1RMZ1 405 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 PARP6Q2NL67 630 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 CMPK2Q5EBM0 449 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ADAT2Q7Z6V5 191 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 NAF1Q96HR8 494 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ZFATQ9P243 1243 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 DBR1Q9UK59 544 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 DNM3Q9UQ16 869 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ALAS1P13196 640 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
CHMP2B-201ENST00000263780 POTEB3A0JP26 581 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 POTECB2RU33 542 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 TTLL1O95922 423 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 NEFHP12036 1026 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 ABCB4P21439 1286 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 FGFR4P22455 802 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 KLRK1P26718 216 aa13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.27
CHMP2B-201ENST00000263780 ZNF211Q13398 564 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms