RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 HP1BP3Q5SSJ5 553 aaPredicted RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 LRRC34Q8IZ02 419 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 PAIP2Q9BPZ3 127 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 DNAJC18Q9H819 358 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 ANKRD63C9JTQ0 380 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 SPOPO43791 374 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 SCTRP47872 440 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 GABPAQ06546 454 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 RINT1Q6NUQ1 792 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 SLC30A5Q8TAD4 765 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 C1orf54Q8WWF1 131 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 TACO1Q9BSH4 297 aaKnown RBP14.31□□□□□ -0.12
PGBD1-201ENST00000259883 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 FMO5P49326 533 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 PMS2P54278 862 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 MYL7Q01449 175 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 LRCH2Q5VUJ6 765 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 CYB5D1Q6P9G0 228 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 JAMLQ86YT9 394 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 SLFN12Q8IYM2 578 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 KIF2BQ8N4N8 673 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
PGBD1-201ENST00000259883 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
PGBD1-201ENST00000259883 INTS2Q9H0H0 1204 aaKnown RBP14.31□□□□□ -0.12
PGBD1-201ENST00000259883 STK38LQ9Y2H1 464 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 ALG6Q9Y672 507 aa14.31□□□□□ -0.12
PGBD1-201ENST00000259883 FSBPO95073 299 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 GH2P01242 217 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PSMC2P35998 433 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ANKRD20A8PQ5CZ79 823 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PPM1KQ8N3J5 372 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ETNPPLQ8TBG4 499 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 RUBCNQ92622 972 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 DDX23Q9BUQ8 820 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 LRRC4BQ9NT99 713 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 INTS9Q9NV88 658 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 CTNNAL1Q9UBT7 734 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 FERP16591 822 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 RPA1P27694 616 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 SSR1P43307 286 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 CD302Q8IX05 232 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 CXorf56Q9H5V9 222 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 BZW2Q9Y6E2 419 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 DDX60LQ5H9U9 1706 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PDXKO00764 312 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 NDUFB10O96000 172 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ECE1P42892 770 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 RPL21P46778 160 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 SPIRE1Q08AE8 756 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PHLDB3Q6NSJ2 640 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PRUNE1Q86TP1 453 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 NEK9Q8TD19 979 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 ATG4AQ8WYN0 398 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 RFFLQ8WZ73 363 aa14.3□□□□□ -0.12
PGBD1-201ENST00000259883 TPX2Q9ULW0 747 aaKnown RBP14.3□□□□□ -0.12
PGBD1-201ENST00000259883 CCDC188H7C350 402 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 IL1R1P14778 569 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 SNCBQ16143 134 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 FAM182AQ5T1J6 154 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 DPY19L2P1Q6NXN4 242 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 ARHGEF19Q8IW93 802 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 RPUSD2Q8IZ73 545 aaKnown RBP14.29□□□□□ -0.12
PGBD1-201ENST00000259883 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 LBHD1Q9BQE6 289 aaPredicted RBP14.29□□□□□ -0.12
PGBD1-201ENST00000259883 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 SUCLA2Q9P2R7 463 aaPredicted RBP14.29□□□□□ -0.12
PGBD1-201ENST00000259883 WRAP73Q9P2S5 460 aaPredicted RBP14.29□□□□□ -0.12
PGBD1-201ENST00000259883 L3MBTL1Q9Y468 752 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 EMSYQ7Z589 1322 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 K7ENM7 598 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 GAS7O60861 476 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 JAG1P78504 1218 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 MTM1Q13496 603 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 FUKQ8N0W3 1084 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
PGBD1-201ENST00000259883 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 CHMP6Q96FZ7 201 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
PGBD1-201ENST00000259883 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms