RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 KLK14Q9P0G3 267 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
LIN28A-201ENST00000254231 PFASO15067 1338 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 LAMB1P07942 1786 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 MAST2Q6P0Q8 1798 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 MCM3APO60318 1980 aa12.73□□□□□ -0.37
LIN28A-201ENST00000254231 CALUO43852 315 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 TRIOBPQ9H2D6 2365 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ZFYVE28Q9HCC9 887 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 TUFT1Q9NNX1 390 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 HYOU1Q9Y4L1 999 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 GSTTP1A0A1W2PQM5 241 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 HOXA7P31268 230 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 NR1I3Q14994 352 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 VWA3BQ502W6 1294 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ZNF720Q7Z2F6 126 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ZNF397Q8NF99 534 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 TINF2Q9BSI4 451 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 POLR3CQ9BUI4 534 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 DDX41Q9UJV9 622 aaKnown RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 H3BRB1 525 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 OATP04181 439 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ACVR2BQ13705 512 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 ZNF569Q5MCW4 686 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 GPRASP2Q96D09 838 aa12.72□□□□□ -0.37
LIN28A-201ENST00000254231 TUT1Q9H6E5 874 aaKnown RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
LIN28A-201ENST00000254231 A0A087WZ62 844 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 LRRC53A6NM62 1247 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
LIN28A-201ENST00000254231 FDX1P10109 184 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 KCNB1Q14721 858 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 ASAP3Q8TDY4 903 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
LIN28A-201ENST00000254231 MROH8Q9H579 483 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 FLRT1Q9NZU1 646 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 ZNF18P17022 549 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 ATP4AP20648 1035 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 CXCR5P32302 372 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 MMP14P50281 582 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 GSDMDP57764 484 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 PRKCZQ05513 592 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 AMHR2Q16671 573 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 KIAA0753Q2KHM9 967 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 FAM160B1Q5W0V3 765 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 KAT5Q92993 513 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.37
LIN28A-201ENST00000254231 PLCB1Q9NQ66 1216 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
LIN28A-201ENST00000254231 EMSYQ7Z589 1322 aa12.71□□□□□ -0.38
LIN28A-201ENST00000254231 ADAT2Q7Z6V5 191 aaKnown RBP12.71□□□□□ -0.38
LIN28A-201ENST00000254231 RASAL3Q86YV0 1011 aa12.71□□□□□ -0.38
LIN28A-201ENST00000254231 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.38
LIN28A-201ENST00000254231 OSMRQ99650 979 aa12.71□□□□□ -0.38
LIN28A-201ENST00000254231 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.38
LIN28A-201ENST00000254231 SMPD1P17405 629 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
LIN28A-201ENST00000254231 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 ADGRA3Q8IWK6 1321 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 PLA2G6O60733 806 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 SFNP31947 248 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 DNM2P50570 870 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
LIN28A-201ENST00000254231 IFRD2Q12894 506 aaPredicted RBP12.7□□□□□ -0.38
LIN28A-201ENST00000254231 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 METTL7BQ6UX53 244 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 RAD9BQ6WBX8 426 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 HOXD13P35453 343 aa12.7□□□□□ -0.38
LIN28A-201ENST00000254231 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms