RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IPO5O00410 1097 aaKnown RBP23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 CCDC172P0C7W6 258 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 BFSP1Q12934 665 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 EMC10Q5UCC4 262 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 AMFRQ9UKV5 643 aa23.5■■□□□ 1.35
SH2D3A-201ENST00000245908 CNTNAP1P78357 1384 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 KRIT1O00522 736 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 HIP1RO75146 1068 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 KDM7AQ6ZMT4 941 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 DAW1Q8N136 415 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 SH2D3CQ8N5H7 860 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 BANK1Q8NDB2 785 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 MXRA8Q9BRK3 442 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 SLITRK6Q9H5Y7 841 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 TTC7AQ9ULT0 858 aaPredicted RBP23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 RFX1P22670 979 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 PPATQ06203 517 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 HLTFQ14527 1009 aaKnown RBP eCLIP23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 SLC35G2Q8TBE7 412 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 NCAPGQ9BPX3 1015 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 DDX47Q9H0S4 455 aaKnown RBP23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 FEM1BQ9UK73 627 aa23.49■■□□□ 1.35
SH2D3A-201ENST00000245908 BUB1BO60566 1050 aaPredicted RBP23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 LRIG3Q6UXM1 1119 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 SUGP1Q8IWZ8 645 aaKnown RBP23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 EFCAB13Q8IY85 973 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 OSGEPQ9NPF4 335 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 EXOC3O60645 756 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 KIF22Q14807 665 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 KCTD16Q68DU8 428 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 RSBN1LQ6PCB5 846 aaPredicted RBP23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 CTNNBL1Q8WYA6 563 aaPredicted RBP23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 PLAAQ9Y263 795 aa23.48■■□□□ 1.35
SH2D3A-201ENST00000245908 BCRP11274 1271 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 ITGA4P13612 1032 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 HSD17B4P51659 736 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 SYCP3Q8IZU3 236 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 LMO3Q8TAP4 145 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 BCAS4Q8TDM0 211 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 DIS3Q9Y2L1 958 aaKnown RBP23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 IGSF9BQ9UPX0 1349 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 ZYXQ15942 572 aaKnown RBP23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 LRRC45Q96CN5 670 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 ATP6V1G3Q96LB4 118 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 MYCBPQ99417 103 aaPredicted RBP23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.47■■□□□ 1.35
SH2D3A-201ENST00000245908 DDX3YO15523 660 aaKnown RBP23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 MAPTP10636 758 aaKnown RBP23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 TNFAIP3P21580 790 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 DLGAP5Q15398 846 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 SPDYE2Q495Y8 402 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 PHLDB3Q6NSJ2 640 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 PADI6Q6TGC4 694 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 TMEM174Q8WUU8 243 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 RPTORQ8N122 1335 aa23.46■■□□□ 1.35
SH2D3A-201ENST00000245908 HMGB1P1B2RPK0 211 aaPredicted RBP23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 K7ENM7 598 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 TBC1D12O60347 775 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 ITGB5P18084 799 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 HSD17B3P37058 310 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 CCT5P48643 541 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 PDCLQ13371 301 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 ALCAMQ13740 583 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 MAATS1Q7Z4T9 603 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 DDX42Q86XP3 938 aaKnown RBP eCLIP23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 CCDC26Q8TAB7 109 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 SEC14L1Q92503 715 aa23.45■■□□□ 1.35
SH2D3A-201ENST00000245908 TTC19Q6DKK2 380 aaPredicted RBP23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 MIER3Q7Z3K6 550 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 HOOK2Q96ED9 719 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 GMLQ99445 158 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 NEUROG2Q9H2A3 272 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 AMACRQ9UHK6 382 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 PPP1R9AQ9ULJ8 1098 aa23.45■■□□□ 1.34
SH2D3A-201ENST00000245908 ANKRD62A6NC57 917 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 KRT13P13646 458 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 NR1D1P20393 614 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 ABCB4P21439 1286 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 PLS1Q14651 629 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 ARHGAP44Q17R89 818 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 ARHGEF26Q96DR7 871 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 TMEM206Q9H813 350 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 TMBIM4Q9HC24 238 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 DDX39AO00148 427 aaKnown RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 P4HBP07237 508 aaKnown RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 CHRM1P11229 460 aaPredicted RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 PTGER2P43116 358 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 ATP1A2P50993 1020 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 UAP1Q16222 522 aaPredicted RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 SAMD1Q6SPF0 538 aaPredicted RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 INTS8Q75QN2 995 aaKnown RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 NIPA1Q7RTP0 329 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 C12orf56Q8IXR9 622 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 VTI1AQ96AJ9 217 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 RNPC3Q96LT9 517 aaKnown RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 FAM107BQ9H098 131 aa23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 LARSQ9P2J5 1176 aaKnown RBP23.44■■□□□ 1.34
SH2D3A-201ENST00000245908 H0YGN5 161 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms