RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-201ENST00000230480 UBXN11Q5T124 520 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 ZNF697Q5TEC3 545 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 PADI6Q6TGC4 694 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 ZNF598Q86UK7 904 aaKnown RBP15.29■□□□□ 0.04
VEGFA-201ENST00000230480 ZNF410Q86VK4 478 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-201ENST00000230480 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 MTRQ99707 1265 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 MSRAQ9UJ68 235 aa15.29■□□□□ 0.04
VEGFA-201ENST00000230480 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-201ENST00000230480 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 ADGRA3Q8IWK6 1321 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 MYH11P35749 1972 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 M0QZ92 97 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 GPR182O15218 404 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 NASPP49321 788 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 PTENP60484 403 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 ERVK-21P61565 698 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 ARSHQ5FYA8 562 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 SPECC1Q5M775 1068 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 FAM102BQ5T8I3 360 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 C1orf186Q6ZWK4 172 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 PLIN2Q99541 437 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 C17orf80Q9BSJ5 609 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 BHMT2Q9H2M3 363 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 ATP6V0A4Q9HBG4 840 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 TFIP11Q9UBB9 837 aaKnown RBP15.28■□□□□ 0.04
VEGFA-201ENST00000230480 HCSTQ9UBK5 93 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
VEGFA-201ENST00000230480 A0A087X0B3 334 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 MEIS3P2A8K0S8 358 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 EYA4O95677 639 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 ZSCAN22P10073 491 aaPredicted RBP15.27■□□□□ 0.04
VEGFA-201ENST00000230480 DDIT3P35638 169 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.04
VEGFA-201ENST00000230480 POU5F1BQ06416 359 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 SLC39A14Q15043 492 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 LINC00301Q8NCQ3 95 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 NLRP7Q8WX94 980 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
VEGFA-201ENST00000230480 EPSTI1Q96J88 318 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
VEGFA-201ENST00000230480 SLC28A3Q9HAS3 691 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 INSL6Q9Y581 213 aa15.27■□□□□ 0.04
VEGFA-201ENST00000230480 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
VEGFA-201ENST00000230480 RALGAPA2Q2PPJ7 1873 aa15.27■□□□□ 0.03
VEGFA-201ENST00000230480 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.03
VEGFA-201ENST00000230480 ASAP2O43150 1006 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 F13A1P00488 732 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 DNM2P50570 870 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 SLC12A3P55017 1021 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
VEGFA-201ENST00000230480 MBTD1Q05BQ5 628 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 NAALADL2Q58DX5 795 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 SLC24A5Q71RS6 500 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 RNF149Q8NC42 400 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 ERMNQ8TAM6 284 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 JPH2Q9BR39 696 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-201ENST00000230480 TRAIPQ9BWF2 469 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 GCOM2Q9BZD3 368 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-201ENST00000230480 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-201ENST00000230480 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
VEGFA-201ENST00000230480 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 B4GALT5O43286 388 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 GAS2O43903 313 aaKnown RBP15.25■□□□□ 0.03
VEGFA-201ENST00000230480 BRD1O95696 1058 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 FGFR1P11362 822 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-201ENST00000230480 CDC42EP1Q00587 391 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 CLLU1OSQ5K130 101 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-201ENST00000230480 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 HAUS3Q68CZ6 603 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-201ENST00000230480 TAS1R3Q7RTX0 852 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 SRGAP1Q7Z6B7 1085 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 NPAS4Q8IUM7 802 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 SYT2Q8N9I0 419 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-201ENST00000230480 TCP11Q8WWU5 503 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 NFKBIZQ9BYH8 718 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms