RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 AMFRQ9UKV5 643 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 UBIAD1Q9Y5Z9 338 aa23.89■■□□□ 1.41
SMARCD2-201ENST00000225742 PPFIA4O75335 1185 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 ITGB5P18084 799 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 CLUL1Q15846 466 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 CBWD6Q4V339 395 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 CBWD3Q5JTY5 395 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 CBWD5Q5RIA9 395 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 PRPF38AQ8NAV1 312 aaKnown RBP23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 SLC17A8Q8NDX2 589 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 ST6GALNAC4Q9H4F1 302 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 SLITRK6Q9H5Y7 841 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 FBXO28Q9NVF7 368 aa23.88■■□□□ 1.41
SMARCD2-201ENST00000225742 ZNF536O15090 1300 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 WDR46O15213 610 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 SKOR1P84550 965 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 ZYXQ15942 572 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 PCNX4Q63HM2 1172 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 KSR1Q8IVT5 923 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 LPAR1Q92633 364 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 ZBED3Q96IU2 234 aaPredicted RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 ZIM3Q96PE6 472 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 GPR88Q9GZN0 384 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 TMEM39BQ9GZU3 492 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 IKZF4Q9H2S9 585 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 KCNH7Q9NS40 1196 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 K7ENM7 598 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 PMM2O15305 246 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 DHX15O43143 795 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 TNFAIP3P21580 790 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 HSPA9P38646 679 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 DAAM2Q86T65 1068 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 KLHL7Q8IXQ5 586 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 CLEC4DQ8WXI8 215 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 CTNNBL1Q8WYA6 563 aaPredicted RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 IWS1Q96ST2 819 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 AGO4Q9HCK5 861 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 TBC1D22BQ9NU19 505 aa23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 NOC2LQ9Y3T9 749 aaKnown RBP23.87■■□□□ 1.41
SMARCD2-201ENST00000225742 TMCO5BA8MYB1 307 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 MCCD1P59942 119 aaPredicted RBP23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 PPP2R5EQ16537 467 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 TKFCQ3LXA3 575 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 AGBL1Q96MI9 1066 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 CCDC43Q96MW1 224 aaKnown RBP23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 ZNRF3Q9ULT6 936 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 USP20Q9Y2K6 914 aa23.86■■□□□ 1.41
SMARCD2-201ENST00000225742 TRIM49P0CI25 452 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 TRIM49CP0CI26 452 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 PLS3P13797 630 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 QARSP47897 775 aaKnown RBP23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 HADHBP55084 474 aaKnown RBP23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 TCEAL1Q15170 157 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 GLYCTKQ8IVS8 523 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 CCDC26Q8TAB7 109 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 LMO3Q8TAP4 145 aa23.85■■□□□ 1.41
SMARCD2-201ENST00000225742 FAM153BP0C7A2 387 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 INPP5BP32019 993 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 RNASE9P60153 205 aaKnown RBP23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 PPATQ06203 517 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 FAM153CQ494X1 144 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 LRIG3Q6UXM1 1119 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 MIGA2Q7L4E1 593 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 HOOK2Q96ED9 719 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 CAPS2Q9BXY5 557 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 FAM153AQ9UHL3 310 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 ANKRD62A6NC57 917 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 KRIT1O00522 736 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 EMC10Q5UCC4 262 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 MAATS1Q7Z4T9 603 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 SLC35G2Q8TBE7 412 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 GLIS2Q9BZE0 524 aaPredicted RBP23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 ZHX2Q9Y6X8 837 aa23.84■■□□□ 1.41
SMARCD2-201ENST00000225742 ESYT3A0FGR9 886 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 ZSCAN5CA6NGD5 496 aaPredicted RBP23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 RARRES1P49788 294 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 VAMP7P51809 220 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 TTMPQ5BVD1 217 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 NIM1KQ8IY84 436 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 LRRC45Q96CN5 670 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 NAP1L3Q99457 506 aaPredicted RBP23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 AGPAT1Q99943 283 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 ZNF341Q9BYN7 854 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 COL20A1Q9P218 1284 aa23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 ZBTB12Q9Y330 459 aaPredicted RBP23.83■■□□□ 1.41
SMARCD2-201ENST00000225742 DDX39AO00148 427 aaKnown RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 SART1O43290 800 aaKnown RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 IRAK1P51617 712 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 ERVK-9P63128 1117 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 GTF2BQ00403 316 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 PHLDB3Q6NSJ2 640 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 SRLQ86TD4 932 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 RHOT2Q8IXI1 618 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 XXYLT1Q8NBI6 393 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 ZFP91Q96JP5 570 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 KIAA1683Q9H0B3 1180 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 COL4A5P29400 1685 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 PFASO15067 1338 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 BUB1BO60566 1050 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 JAK3P52333 1124 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms