RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 HIP1RO75146 1068 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 SLFN14P0C7P3 912 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 POU5F1BQ06416 359 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 PPIGQ13427 754 aaKnown RBP eCLIP26.17■■□□□ 1.788e-7■■■■□ 26.1
HOMER3-201ENST00000221222 USP38Q8NB14 1042 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 VWCEQ96DN2 955 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 PPP1R16BQ96T49 567 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 ODF2LQ9ULJ1 636 aa26.17■■□□□ 1.78
HOMER3-201ENST00000221222 LAMA2P24043 3122 aaKnown RBP26.16■■□□□ 1.78
HOMER3-201ENST00000221222 ACTN4O43707 911 aaKnown RBP26.16■■□□□ 1.78
HOMER3-201ENST00000221222 PFKMP08237 780 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 LPIN1Q14693 890 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 TPRNQ4KMQ1 711 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 NLRP7Q8WX94 980 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 OSMRQ99650 979 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 OSBPL7Q9BZF2 842 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 C17orf75Q9HAS0 396 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 IL23AQ9NPF7 189 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 GINS2Q9Y248 185 aa26.16■■□□□ 1.78
HOMER3-201ENST00000221222 A0A087WZ62 844 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 NPHP3-ACAD11A0A0J9YXS1 232 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 MYMKA6NI61 221 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 GADD45BO75293 160 aaPredicted RBP26.15■■□□□ 1.78
HOMER3-201ENST00000221222 CAPSQ13938 189 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 GIT2Q14161 759 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 TFDP1Q14186 410 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 RPUSD2Q8IZ73 545 aaKnown RBP26.15■■□□□ 1.78
HOMER3-201ENST00000221222 TMEM40Q8WWA1 233 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 NLRP4Q96MN2 994 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 REEP2Q9BRK0 252 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 FDXACB1Q9BRP7 624 aaPredicted RBP26.15■■□□□ 1.78
HOMER3-201ENST00000221222 LRRC27Q9C0I9 530 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 IFT122Q9HBG6 1241 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 SERTAD1Q9UHV2 236 aa26.15■■□□□ 1.78
HOMER3-201ENST00000221222 DARSP14868 501 aaKnown RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 EIF4BP23588 611 aaKnown RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 UBE2HP62256 183 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 RAD51AP2Q09MP3 1159 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 PPP2R5AQ15172 486 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 LONRF3Q496Y0 759 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 TSHZ1Q6ZSZ6 1077 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 IFNLR1Q8IU57 520 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 CEP57L1Q8IYX8 460 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 FMR1NBQ8N0W7 255 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 RNF149Q8NC42 400 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 ENGASEQ8NFI3 743 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 BSNDQ8WZ55 320 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 DDX12PQ92771 950 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 ZNF668Q96K58 619 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 SCLT1Q96NL6 688 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 NFKBIZQ9BYH8 718 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 GCOM2Q9BZD3 368 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-201ENST00000221222 POLD4Q9HCU8 107 aa26.14■■□□□ 1.78
HOMER3-201ENST00000221222 PRPF40AO75400 957 aaKnown RBP26.13■■□□□ 1.77
HOMER3-201ENST00000221222 KRT18P05783 430 aaKnown RBP26.13■■□□□ 1.77
HOMER3-201ENST00000221222 SRGAP2CP0DJJ0 459 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 GHRP10912 638 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 NAMPTP43490 491 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 ZNF131P52739 623 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 EPHB4P54760 987 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 AMPD3Q01432 767 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 FAM160A1Q05DH4 1040 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 PLEKHG4Q58EX7 1191 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 CNNM4Q6P4Q7 775 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 DEFB128Q7Z7B8 93 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 DNAJC19Q96DA6 116 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 IFT74Q96LB3 600 aa26.13■■□□□ 1.77
HOMER3-201ENST00000221222 ZNF202O95125 648 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 PHKA2P46019 1235 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 PTENP60484 403 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 SNW1Q13573 536 aaKnown RBP26.12■■□□□ 1.77
HOMER3-201ENST00000221222 C16orf59Q7L2K0 433 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 SRGAP1Q7Z6B7 1085 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 INO80BQ9C086 356 aaPredicted RBP26.12■■□□□ 1.77
HOMER3-201ENST00000221222 AGO3Q9H9G7 860 aaKnown RBP26.12■■□□□ 1.77
HOMER3-201ENST00000221222 STXBP5LQ9Y2K9 1186 aa26.12■■□□□ 1.77
HOMER3-201ENST00000221222 NOC2LQ9Y3T9 749 aaKnown RBP26.12■■□□□ 1.77
HOMER3-201ENST00000221222 CACNB1Q02641 598 aaPredicted RBP26.11■■□□□ 1.77
HOMER3-201ENST00000221222 CDCA2Q69YH5 1023 aaPredicted RBP26.11■■□□□ 1.77
HOMER3-201ENST00000221222 FAM43BQ6ZT52 329 aaPredicted RBP26.11■■□□□ 1.77
HOMER3-201ENST00000221222 DYMQ7RTS9 669 aa26.11■■□□□ 1.77
HOMER3-201ENST00000221222 STAMQ92783 540 aa26.11■■□□□ 1.77
HOMER3-201ENST00000221222 IFIH1Q9BYX4 1025 aaKnown RBP26.11■■□□□ 1.77
HOMER3-201ENST00000221222 TRIM9Q9C026 710 aa26.11■■□□□ 1.77
HOMER3-201ENST00000221222 KCNG1Q9UIX4 513 aa26.11■■□□□ 1.77
HOMER3-201ENST00000221222 RPS6KA5O75582 802 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 PLS3P13797 630 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 ODR4Q5SWX8 454 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 KRBA2Q6ZNG9 492 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 SPIRE2Q8WWL2 714 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 APBB2Q92870 758 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 PAGE5Q96GU1 130 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 C7orf25Q9BPX7 421 aa26.1■■□□□ 1.77
HOMER3-201ENST00000221222 NTPCRQ9BSD7 190 aaKnown RBP26.1■■□□□ 1.77
HOMER3-201ENST00000221222 LRRIQ4A6NIV6 560 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 SFI1A8K8P3 1242 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 TBCAO75347 108 aaKnown RBP26.09■■□□□ 1.77
HOMER3-201ENST00000221222 FAM13AO94988 1023 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 ACRP10323 421 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 CD52P31358 61 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms