RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ANKRD63C9JTQ0 380 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 H0Y3Z8 333 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 TBCAO75347 108 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 BIRC2Q13490 618 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 EPHA7Q15375 998 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZDHHC24Q6UX98 284 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 TAOK1Q7L7X3 1001 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ADGRF4Q8IZF3 695 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 NAP1L3Q99457 506 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ARHGEF10LQ9HCE6 1279 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 USP40Q9NVE5 1235 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 RPTORQ8N122 1335 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 CALUO43852 315 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 RTN2O75298 545 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 FERP16591 822 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 LACTBP83111 547 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 POU5F1Q01860 360 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ADCY2Q08462 1091 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 BTBD6Q96KE9 485 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ADAM33Q9BZ11 813 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 DNM3Q9UQ16 869 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ADAMTSL3P82987 1691 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 TCRBV7S2A1N4TA0A589 114 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 EME2A4GXA9 379 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ATP11AP98196 1134 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 CNGA2Q16280 664 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZC2HC1CQ53FD0 456 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 CPNE8Q86YQ8 564 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 PIGOQ8TEQ8 1089 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 SLC35C1Q96A29 364 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 MRRFQ96E11 262 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 HOMER3Q9NSC5 361 aa21.67■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 CFAP73A6NFT4 308 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 BTNL10A8MVZ5 291 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 DDX3YO15523 660 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 SF3B3Q15393 1217 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 TAF11Q15544 211 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 SLFN11Q7Z7L1 901 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 EXOC3L1Q86VI1 746 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 CENPTQ96BT3 561 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZBTB10Q96DT7 871 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 PGM2Q96G03 612 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 AGTP01019 485 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 AUHQ13825 339 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 FRMD5Q7Z6J6 570 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 ETNK1Q9HBU6 452 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 KDM3AQ9Y4C1 1321 aa21.66■■□□□ 1.06
PPP1R3F-201ENST00000055335 ZBTB48P10074 688 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 SARNPP82979 210 aaKnown RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 SEPT2Q15019 361 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 CATSPER3Q86XQ3 398 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 EBF2Q9HAK2 575 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 COG5Q9UP83 839 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 CHMP2AO43633 222 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 PDHA1P08559 390 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 RPL13P26373 211 aaKnown RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 STX2P32856 288 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 COPS2P61201 443 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 CALCOCO2Q13137 446 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 COG2Q14746 738 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 EDRF1Q3B7T1 1238 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 ARMC2Q8NEN0 867 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 ASIC3Q9UHC3 531 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 PPP1R11O60927 126 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 TAL1P17542 331 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 NMT1P30419 496 aaKnown RBP21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 SOX5P35711 763 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 MSH2P43246 934 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 TTC27Q6P3X3 843 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 FAM186BQ8IYM0 893 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 JMJD4Q9H9V9 463 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 AFF2P51816 1311 aa21.65■■□□□ 1.06
PPP1R3F-201ENST00000055335 RIPK2O43353 540 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 GSTA1P08263 222 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 NUDT17P0C025 328 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 GIT2Q14161 759 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 WDR66Q8TBY9 1149 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 PWWP2AQ96N64 755 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 SIX2Q9NPC8 291 aa21.64■■□□□ 1.06
PPP1R3F-201ENST00000055335 SPOPO43791 374 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 HOXD13P35453 343 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 SLC8A3P57103 927 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 SAMD1Q6SPF0 538 aaPredicted RBP21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 NSMFQ6X4W1 530 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 MYCT1Q8N699 235 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 FITM2Q8N6M3 262 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 PRELID2Q8N945 189 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 SLC20A1Q8WUM9 679 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 RIOX1Q9H6W3 641 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 AKR1B1P15121 316 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 LMNB1P20700 586 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 MARSP56192 900 aaKnown RBP21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 IKQ13123 557 aaPredicted RBP21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 C1orf54Q8WWF1 131 aa21.64■■□□□ 1.05
PPP1R3F-201ENST00000055335 RMDN2Q96LZ7 410 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms