RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 COPS5Q92905 334 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 SERPING1P05155 500 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 PASD1Q8IV76 773 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 ZNF653Q96CK0 615 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 WDR18Q9BV38 432 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 IKBKGQ9Y6K9 419 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 ESYT2A0FGR8 921 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 DYNC1LI2O43237 492 aaPredicted RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 MYL1P05976 194 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 PSAPP07602 524 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 CYP11B2P19099 503 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 GGCXP38435 758 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 ARFGAP2Q8N6H7 521 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 MTRQ99707 1265 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 PDCD2LQ9BRP1 358 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 FAM213AQ9BRX8 229 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 NXF1Q9UBU9 619 aaKnown RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 SLC9A2Q9UBY0 812 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 K7ERI5 159 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 ACOT2P49753 483 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 OSBPL9Q96SU4 736 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 ASCC2Q9H1I8 757 aaPredicted RBP13.04□□□□□ -0.32
CHPF2-201ENST00000035307 CAPN11Q9UMQ6 739 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 C19orf81C9J6K1 198 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 FGGP02679 453 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 MXI1P50539 228 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 HERVK_113P62684 666 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 TMEM132BQ14DG7 1078 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 RPGRIP1Q96KN7 1286 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 KIAA1683Q9H0B3 1180 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
CHPF2-201ENST00000035307 SREBF1P36956 1147 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 SH2D3CQ8N5H7 860 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 KLRG1Q96E93 195 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 CEP83Q9Y592 693 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 ITGB5P18084 799 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 PRAMEF19Q5SWL8 479 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 ERO1BQ86YB8 467 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 FAM71BQ8TC56 605 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 GOLGA8SH3BPF8 625 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 DHX9Q08211 1270 aaKnown RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 PDIA5Q14554 519 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 NLRP7Q8WX94 980 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 MKL1Q969V6 931 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 GMLQ99445 158 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
CHPF2-201ENST00000035307 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 TBK1Q9UHD2 729 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 MYH3P11055 1940 aa13.03□□□□□ -0.32
CHPF2-201ENST00000035307 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 DESP17661 470 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 COPB2P35606 906 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 SNAPC2Q13487 334 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 HAUS6Q7Z4H7 955 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.32
CHPF2-201ENST00000035307 SYCE1Q8N0S2 351 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 HAUS1Q96CS2 278 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 SNX24Q9Y343 169 aa13.02□□□□□ -0.32
CHPF2-201ENST00000035307 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 TBC1D8O95759 1140 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 CASP5P51878 434 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 ZKSCAN8Q15776 578 aaPredicted RBP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.33
CHPF2-201ENST00000035307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHPF2-201ENST00000035307 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms