RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TSGA10Q9BZW7 698 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SIX2Q9NPC8 291 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 TBX20Q9UMR3 447 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 PPME1Q9Y570 386 aa15.65■□□□□ 0.1
RTFDC1-201ENST00000023939 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 ZNF263O14978 683 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 PMM2O15305 246 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 OATP04181 439 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 PLEKP08567 350 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 CETPP11597 493 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 SLC9A1P19634 815 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 ATP4AP20648 1035 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 ANXA13P27216 316 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 FMO5P49326 533 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 BFSP1Q12934 665 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 KIAA1328Q86T90 577 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 TXLNBQ8N3L3 684 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 KMT5AQ9NQR1 393 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 MRFAP1Q9Y605 127 aa15.64■□□□□ 0.09
RTFDC1-201ENST00000023939 P4HA2O15460 535 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 ABL1P00519 1130 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 SP4Q02446 784 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 ENPEPQ07075 957 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 NCBP1Q09161 790 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 CCDC122Q5T0U0 273 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 ZNF526Q8TF50 670 aaPredicted RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 BSNDQ8WZ55 320 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 CEP89Q96ST8 783 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 R3HDMLQ9H3Y0 253 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 DHX33Q9H6R0 707 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 DDX41Q9UJV9 622 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 BZW2Q9Y6E2 419 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 DOCK5Q9H7D0 1870 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 CTAGE9A4FU28 777 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 PJA2O43164 708 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 AKR1B10O60218 316 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 N4BP1O75113 896 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 KRT13P13646 458 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 GTF2A2P52657 109 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 JAM2P57087 298 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 TARBP2Q15633 366 aaKnown RBP15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 FAM160B1Q5W0V3 765 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 SLC35F6Q8N357 371 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 SEPT1Q8WYJ6 367 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 TSC1Q92574 1164 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 PCYT2Q99447 389 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 CBWD1Q9BRT8 395 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 DEF6Q9H4E7 631 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 HSPBP1Q9NZL4 362 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 GCNT4Q9P109 453 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 ARHGAP28Q9P2N2 729 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 PCDHA13Q9Y5I0 950 aa15.63■□□□□ 0.09
RTFDC1-201ENST00000023939 DENND3A2RUS2 1198 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 CCDC169A6NNP5 214 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 ACTN1P12814 892 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 RFC5P40937 340 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 PRKCIP41743 596 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 CCNA1P78396 465 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 CYP27A1Q02318 531 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 APBA1Q02410 837 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 KIF5AQ12840 1032 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 EMC2Q15006 297 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 ASIC2Q16515 512 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 MAP1SQ66K74 1059 aaPredicted RBP15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 ANKRD23Q86SG2 305 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 ZNF710Q8N1W2 664 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 GPRC5AQ8NFJ5 357 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 IFT74Q96LB3 600 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 NAPGQ99747 312 aaPredicted RBP15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 IFIH1Q9BYX4 1025 aaKnown RBP15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 LACRTQ9GZZ8 138 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 NRBP2Q9NSY0 501 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 GUCA1BQ9UMX6 200 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 USP20Q9Y2K6 914 aa15.62■□□□□ 0.09
RTFDC1-201ENST00000023939 RCCD1A6NED2 376 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 ASB14A6NK59 587 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 LGR5O75473 907 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 GGPS1O95749 300 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 PGK2P07205 417 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 RFX1P22670 979 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 RAPGEF1Q13905 1077 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 IRF2BP2Q7Z5L9 587 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 MTERF4Q7Z6M4 381 aaKnown RBP15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 FMNL3Q8IVF7 1028 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 ABRAQ8N0Z2 381 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 FBXL18Q96ME1 805 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 POLR3FQ9H1D9 316 aaPredicted RBP15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 PORCNQ9H237 461 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 MORF4L1Q9UBU8 362 aa15.61■□□□□ 0.09
RTFDC1-201ENST00000023939 FHOD1Q9Y613 1164 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms