RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PTENP60484 403 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 KLRC3Q07444 240 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 ERMARDQ5T6L9 678 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 ZDHHC24Q6UX98 284 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 JAMLQ86YT9 394 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 RFFLQ8WZ73 363 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 CCT6BQ92526 530 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 CHMP6Q96FZ7 201 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 MBOAT7Q96N66 472 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 CCDC113Q9H0I3 377 aa15.2■□□□□ 0.02
USH1C-201ENST00000005226 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.2■□□□□ 0.02
USH1C-201ENST00000005226 ZMYM2Q9UBW7 1377 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 NHSQ6T4R5 1651 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 TCRBV7S2A1N4TA0A589 114 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 C5orf60A6NFR6 353 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 FAM13AO94988 1023 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 MMEP08473 750 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 FGFR4P22455 802 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 ZNF76P36508 570 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 MAEAQ7L5Y9 396 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 LRRC34Q8IZ02 419 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 BANK1Q8NDB2 785 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
USH1C-201ENST00000005226 TBC1D22AQ8WUA7 517 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 ADAM7Q9H2U9 754 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
USH1C-201ENST00000005226 ALG6Q9Y672 507 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 SRRM3A6NNA2 597 aaPredicted RBP15.19■□□□□ 0.02
USH1C-201ENST00000005226 PSMC2P35998 433 aaKnown RBP15.19■□□□□ 0.02
USH1C-201ENST00000005226 TTC27Q6P3X3 843 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 ACP6Q9NPH0 428 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 KCNQ5Q9NR82 932 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 VAV3Q9UKW4 847 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 PTPN22Q9Y2R2 807 aa15.19■□□□□ 0.02
USH1C-201ENST00000005226 TISP43B9A030 160 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 KIAA0391O15091 583 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 ATMINO43313 823 aaPredicted RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 GDF11O95390 407 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 PAEPP09466 180 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 TMEM253P0C7T8 217 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 KCNJ1P48048 391 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 PHLDB3Q6NSJ2 640 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 HOOK2Q96ED9 719 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 DYDC2Q96IM9 177 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 PRMT1Q99873 361 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 FAM129AQ9BZQ8 928 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 RAB17Q9H0T7 212 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 ACTR5Q9H9F9 607 aaPredicted RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 LMNB1P20700 586 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 RPL21P46778 160 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 NPEPPSP55786 919 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 SNCBQ16143 134 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 BTBD6Q96KE9 485 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 NAP1L4Q99733 375 aaKnown RBP15.18■□□□□ 0.02
USH1C-201ENST00000005226 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 ATAD5Q96QE3 1844 aa15.18■□□□□ 0.02
USH1C-201ENST00000005226 SLC16A3O15427 465 aaKnown RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 DLG4P78352 724 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 PLCB4Q15147 1175 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 FAM133BQ5BKY9 247 aaKnown RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 DENND2CQ68D51 928 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 EYA4O95677 639 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 SERPINB2P05120 415 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 DRP2Q13474 957 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 MESDQ14696 234 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 LRRC14Q15048 493 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 BMT2Q1RMZ1 405 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 PRELID2Q8N945 189 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 MGARPQ8TDB4 240 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 TBC1D31Q96DN5 1066 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 SGSM3Q96HU1 749 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 ZNF317Q96PQ6 595 aaPredicted RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
USH1C-201ENST00000005226 GRHL1Q9NZI5 618 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 RPTORQ8N122 1335 aa15.17■□□□□ 0.02
USH1C-201ENST00000005226 CCT8L1PA6NM43 557 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 RGS16O15492 202 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 TRIM37O94972 964 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 VIMP08670 466 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 VCAM1P19320 739 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 PTGIRP43119 386 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms