RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gadd45gQ9Z111 159 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mup5P11591 180 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Naif1Q6PFD7 327 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Asnsd1Q8BFS9 627 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Serpina3iD3Z450 408 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Prl3b1P09586 222 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pth1rP41593 591 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Oca2Q62052 833 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 B020011L13RikA0A087WQI7 412 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm6657A0A1B0GRJ3 277 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Slc35g2D3YVE8 412 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Aff1O88573 1216 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Smarca1Q6PGB8 1046 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 MtbpQ8BJS8 894 aaKnown RBP10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 CemipQ8BI06 1361 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Kdm6bQ5NCY0 1641 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 MeiocA2AG06 965 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mms22lB1AUR6 1238 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 DtnbO70585 659 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mucl2P02815 138 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Foxn3Q499D0 457 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pomgnt1Q91X88 660 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdk12Q14AX6 1484 aaKnown RBP10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trappc11B2RXC1 1133 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hmgxb3G3X9M3 1254 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Edem3Q2HXL6 931 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmem35bQ3U0Y2 150 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hdac10Q6P3E7 666 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Strip2Q8C9H6 844 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmco4Q91WU4 631 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tlr3Q99MB1 905 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Bub1bQ9Z1S0 1052 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rbm6S4R1W5 1118 aaKnown RBP10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Col15a1O35206 1367 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Xxylt1Q3U4G3 392 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ttf2Q5NC05 1138 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Xlr3aQ60595 226 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krr1Q8BGA5 380 aaKnown RBP10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Prkag3Q8BGM7 489 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 GzmnQ920S1 248 aa10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mrpl11Q9CQF0 192 aaKnown RBP10.79□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ccdc144bE9PVZ3 520 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pwp2Q8BU03 919 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rpa3Q9CQ71 121 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dkc1Q9ESX5 509 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sgpp1Q9JI99 430 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Abcc3B2RX12 1523 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cfap65Q3V0B4 1847 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Zbtb7aO88939 569 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hspa4lP48722 838 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Kcnn2P58390 839 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Runx2Q08775 607 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Stx3Q64704 289 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krt72Q6IME9 520 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dnajc6Q80TZ3 938 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gga1Q8R0H9 635 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rtn3Q9ES97 964 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Iqsec2Q5DU25 1478 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ttll10A4Q9F3 704 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Vps4bP46467 444 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rgs9bpQ148R9 237 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Q14AM7 275 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krt31Q61765 416 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Acap2Q6ZQK5 770 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gpr139Q80UC8 345 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tgif2lx2Q8K5B9 231 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Slc5a4bQ91ZP4 660 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rfx8D3YU81 596 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Uhmk1P97343 419 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm156Q58A37 223 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Uba6Q8C7R4 1053 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 PdxkQ8K183 312 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rnf112Q96DY5 654 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Myo1hQ9D6A1 958 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 PigbQ9JJQ0 542 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 1700016G14RikA0A286YCZ6 238 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Olfr552E9Q545 317 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mrps31Q61733 384 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cwf19l2Q8BG79 887 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Atp6v1b1Q91YH6 513 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Xpo5Q924C1 1204 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 BlvraQ9CY64 295 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hdac6Q9Z2V5 1149 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ccdc194A0A140LIT1 234 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Patl2A2ARM1 529 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gnat1P20612 350 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dynll1P63168 89 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Znf827Q505G8 1078 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 FntaQ61239 377 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Wdr91Q7TMQ7 748 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdk5rap3Q99LM2 503 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 4921524L21RikQ9D5T2 438 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Styxl1Q9DAR2 321 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdc42bpgQ80UW5 1551 aa10.78□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rap1gds1E9Q912 607 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pid1Q3UBG2 217 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 P2rx5Q3UYI1 455 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Baiap3Q80TT2 1134 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Clca2Q8BG22 942 aa10.77□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms