RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 REREQ9P2R6 1566 aa19.12■□□□□ 0.65
PHGDH-220ENST00000641570 MLECQ14165 292 aa19.12■□□□□ 0.65
PHGDH-220ENST00000641570 HRCP23327 699 aa19.1■□□□□ 0.65
PHGDH-220ENST00000641570 NUP155O75694 1391 aa19.08■□□□□ 0.65
PHGDH-220ENST00000641570 AGLP35573 1532 aa19.08■□□□□ 0.64
PHGDH-220ENST00000641570 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
PHGDH-220ENST00000641570 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
PHGDH-220ENST00000641570 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
PHGDH-220ENST00000641570 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
PHGDH-220ENST00000641570 UNC13BO14795 1591 aa19■□□□□ 0.63
PHGDH-220ENST00000641570 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
PHGDH-220ENST00000641570 BCORL1Q5H9F3 1711 aa18.99■□□□□ 0.63
PHGDH-220ENST00000641570 KDM5DQ9BY66 1539 aa18.99■□□□□ 0.63
PHGDH-220ENST00000641570 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PHGDH-220ENST00000641570 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
PHGDH-220ENST00000641570 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-220ENST00000641570 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
PHGDH-220ENST00000641570 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
PHGDH-220ENST00000641570 ZC3H13Q5T200 1668 aaKnown RBP18.94■□□□□ 0.62
PHGDH-220ENST00000641570 PKD2Q13563 968 aa18.93■□□□□ 0.62
PHGDH-220ENST00000641570 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
PHGDH-220ENST00000641570 ABCC3O15438 1527 aa18.92■□□□□ 0.62
PHGDH-220ENST00000641570 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
PHGDH-220ENST00000641570 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
PHGDH-220ENST00000641570 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
PHGDH-220ENST00000641570 PZPP20742 1482 aa18.88■□□□□ 0.61
PHGDH-220ENST00000641570 TET3O43151 1660 aa18.88■□□□□ 0.61
PHGDH-220ENST00000641570 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
PHGDH-220ENST00000641570 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
PHGDH-220ENST00000641570 FER1L4A9Z1Z3 1794 aa18.86■□□□□ 0.61
PHGDH-220ENST00000641570 CEP152O94986 1710 aa18.86■□□□□ 0.61
PHGDH-220ENST00000641570 CLTCQ00610 1675 aaKnown RBP18.86■□□□□ 0.61
PHGDH-220ENST00000641570 EFCAB6Q5THR3 1501 aa18.86■□□□□ 0.61
PHGDH-220ENST00000641570 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
PHGDH-220ENST00000641570 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
PHGDH-220ENST00000641570 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
PHGDH-220ENST00000641570 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
PHGDH-220ENST00000641570 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
PHGDH-220ENST00000641570 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
PHGDH-220ENST00000641570 FOXD1Q16676 465 aa18.82■□□□□ 0.6
PHGDH-220ENST00000641570 NPATQ14207 1427 aa18.81■□□□□ 0.6
PHGDH-220ENST00000641570 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
PHGDH-220ENST00000641570 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
PHGDH-220ENST00000641570 RIMS1Q86UR5 1692 aaKnown RBP18.8■□□□□ 0.6
PHGDH-220ENST00000641570 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
PHGDH-220ENST00000641570 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
PHGDH-220ENST00000641570 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
PHGDH-220ENST00000641570 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
PHGDH-220ENST00000641570 TNRQ92752 1358 aa18.76■□□□□ 0.59
PHGDH-220ENST00000641570 E9PCH4 1651 aa18.76■□□□□ 0.59
PHGDH-220ENST00000641570 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-220ENST00000641570 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
PHGDH-220ENST00000641570 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
PHGDH-220ENST00000641570 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
PHGDH-220ENST00000641570 PTPRMP28827 1452 aa18.73■□□□□ 0.59
PHGDH-220ENST00000641570 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-220ENST00000641570 TRPM2O94759 1503 aa18.73■□□□□ 0.59
PHGDH-220ENST00000641570 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
PHGDH-220ENST00000641570 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
PHGDH-220ENST00000641570 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
PHGDH-220ENST00000641570 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
PHGDH-220ENST00000641570 PTPRTO14522 1441 aa18.7■□□□□ 0.58
PHGDH-220ENST00000641570 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
PHGDH-220ENST00000641570 C3P01024 1663 aa18.69■□□□□ 0.58
PHGDH-220ENST00000641570 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
PHGDH-220ENST00000641570 NOS1P29475 1434 aa18.69■□□□□ 0.58
PHGDH-220ENST00000641570 NLRP1Q9C000 1473 aa18.67■□□□□ 0.58
PHGDH-220ENST00000641570 KDM4FA0A1W2PPD8 638 aa18.67■□□□□ 0.58
PHGDH-220ENST00000641570 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
PHGDH-220ENST00000641570 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-220ENST00000641570 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
PHGDH-220ENST00000641570 HDGFP51858 240 aaKnown RBP18.63■□□□□ 0.57
PHGDH-220ENST00000641570 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
PHGDH-220ENST00000641570 IDI1Q13907 227 aa18.62■□□□□ 0.57
PHGDH-220ENST00000641570 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
PHGDH-220ENST00000641570 SYNMO15061 1565 aa18.62■□□□□ 0.57
PHGDH-220ENST00000641570 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
PHGDH-220ENST00000641570 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-220ENST00000641570 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-220ENST00000641570 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
PHGDH-220ENST00000641570 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
PHGDH-220ENST00000641570 THEMISQ8N1K5 641 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-220ENST00000641570 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
PHGDH-220ENST00000641570 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PHGDH-220ENST00000641570 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
PHGDH-220ENST00000641570 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
PHGDH-220ENST00000641570 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
PHGDH-220ENST00000641570 KIF1BO60333 1816 aa18.57■□□□□ 0.56
PHGDH-220ENST00000641570 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
PHGDH-220ENST00000641570 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.56■□□□□ 0.56
PHGDH-220ENST00000641570 BCANQ96GW7 911 aa18.56■□□□□ 0.56
PHGDH-220ENST00000641570 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
PHGDH-220ENST00000641570 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-220ENST00000641570 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
PHGDH-220ENST00000641570 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
PHGDH-220ENST00000641570 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
PHGDH-220ENST00000641570 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-220ENST00000641570 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
PHGDH-220ENST00000641570 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
PHGDH-220ENST00000641570 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms