RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
SCARB2-226ENST00000640916 EEA1Q15075 1411 aa13.69□□□□□ -0.22
SCARB2-226ENST00000640916 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-226ENST00000640916 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
SCARB2-226ENST00000640916 ATP7AQ04656 1500 aa13.67□□□□□ -0.22
SCARB2-226ENST00000640916 A2MP01023 1474 aa13.67□□□□□ -0.22
SCARB2-226ENST00000640916 SPAG9O60271 1321 aaKnown RBP13.65□□□□□ -0.22
SCARB2-226ENST00000640916 HNRNPMP52272 730 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCARB2-226ENST00000640916 GGT6Q6P531 493 aa13.65□□□□□ -0.22
SCARB2-226ENST00000640916 MED14O60244 1454 aa13.65□□□□□ -0.22
SCARB2-226ENST00000640916 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
SCARB2-226ENST00000640916 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
SCARB2-226ENST00000640916 FBXO31Q5XUX0 539 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-226ENST00000640916 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
SCARB2-226ENST00000640916 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
SCARB2-226ENST00000640916 ZBTB22O15209 634 aa13.62□□□□□ -0.23
SCARB2-226ENST00000640916 ADGBQ8N7X0 1667 aa13.62□□□□□ -0.23
SCARB2-226ENST00000640916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCARB2-226ENST00000640916 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
SCARB2-226ENST00000640916 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
SCARB2-226ENST00000640916 TNRQ92752 1358 aa13.6□□□□□ -0.23
SCARB2-226ENST00000640916 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
SCARB2-226ENST00000640916 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
SCARB2-226ENST00000640916 NPHP4O75161 1426 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-226ENST00000640916 ANKLE2Q86XL3 938 aa13.6□□□□□ -0.23
SCARB2-226ENST00000640916 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-226ENST00000640916 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
SCARB2-226ENST00000640916 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
SCARB2-226ENST00000640916 SYNMO15061 1565 aa13.58□□□□□ -0.24
SCARB2-226ENST00000640916 PZPP20742 1482 aa13.57□□□□□ -0.24
SCARB2-226ENST00000640916 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
SCARB2-226ENST00000640916 CCDC18Q5T9S5 1454 aa13.56□□□□□ -0.24
SCARB2-226ENST00000640916 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
SCARB2-226ENST00000640916 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
SCARB2-226ENST00000640916 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-226ENST00000640916 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
SCARB2-226ENST00000640916 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
SCARB2-226ENST00000640916 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
SCARB2-226ENST00000640916 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
SCARB2-226ENST00000640916 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
SCARB2-226ENST00000640916 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.25
SCARB2-226ENST00000640916 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.25
SCARB2-226ENST00000640916 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
SCARB2-226ENST00000640916 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
SCARB2-226ENST00000640916 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-226ENST00000640916 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
SCARB2-226ENST00000640916 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
SCARB2-226ENST00000640916 CFDP1Q9UEE9 299 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-226ENST00000640916 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
SCARB2-226ENST00000640916 KIF3BO15066 747 aa13.47□□□□□ -0.25
SCARB2-226ENST00000640916 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
SCARB2-226ENST00000640916 UBR1Q8IWV7 1749 aa13.45□□□□□ -0.26
SCARB2-226ENST00000640916 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
SCARB2-226ENST00000640916 FYCO1Q9BQS8 1478 aa13.45□□□□□ -0.26
SCARB2-226ENST00000640916 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCARB2-226ENST00000640916 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
SCARB2-226ENST00000640916 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
SCARB2-226ENST00000640916 LTKP29376 864 aa13.43□□□□□ -0.26
SCARB2-226ENST00000640916 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
SCARB2-226ENST00000640916 CFAP65Q6ZU64 1925 aaKnown RBP13.42□□□□□ -0.26
SCARB2-226ENST00000640916 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
SCARB2-226ENST00000640916 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
SCARB2-226ENST00000640916 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
SCARB2-226ENST00000640916 ERVK-7P63135 1459 aa13.4□□□□□ -0.26
SCARB2-226ENST00000640916 ABCC3O15438 1527 aa13.39□□□□□ -0.27
SCARB2-226ENST00000640916 SLIT1O75093 1534 aa13.39□□□□□ -0.27
SCARB2-226ENST00000640916 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
SCARB2-226ENST00000640916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCARB2-226ENST00000640916 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
SCARB2-226ENST00000640916 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
SCARB2-226ENST00000640916 PHLPP1O60346 1717 aa13.37□□□□□ -0.27
SCARB2-226ENST00000640916 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-226ENST00000640916 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
SCARB2-226ENST00000640916 LRP6O75581 1613 aa13.35□□□□□ -0.27
SCARB2-226ENST00000640916 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
SCARB2-226ENST00000640916 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
SCARB2-226ENST00000640916 CEP152O94986 1710 aa13.34□□□□□ -0.27
SCARB2-226ENST00000640916 RBM33Q96EV2 1170 aaKnown RBP13.34□□□□□ -0.27
SCARB2-226ENST00000640916 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-226ENST00000640916 JCADQ9P266 1359 aa13.33□□□□□ -0.27
SCARB2-226ENST00000640916 TET3O43151 1660 aa13.32□□□□□ -0.28
SCARB2-226ENST00000640916 MTUS2Q5JR59 1369 aa13.32□□□□□ -0.28
SCARB2-226ENST00000640916 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
SCARB2-226ENST00000640916 KCNA6P17658 529 aa13.31□□□□□ -0.28
SCARB2-226ENST00000640916 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
SCARB2-226ENST00000640916 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
SCARB2-226ENST00000640916 PRDM15P57071 1507 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-226ENST00000640916 PIK3C2BO00750 1634 aa13.3□□□□□ -0.28
SCARB2-226ENST00000640916 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
SCARB2-226ENST00000640916 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
SCARB2-226ENST00000640916 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
SCARB2-226ENST00000640916 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
SCARB2-226ENST00000640916 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-226ENST00000640916 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SCARB2-226ENST00000640916 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-226ENST00000640916 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
SCARB2-226ENST00000640916 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
SCARB2-226ENST00000640916 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
SCARB2-226ENST00000640916 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
SCARB2-226ENST00000640916 CDK12Q9NYV4 1490 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms