RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
HLA-B-258ENST00000640615 KIF3BO15066 747 aa12.94□□□□□ -0.34
HLA-B-258ENST00000640615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
HLA-B-258ENST00000640615 ATP10AO60312 1499 aa12.92□□□□□ -0.34
HLA-B-258ENST00000640615 ABCA6Q8N139 1617 aa12.92□□□□□ -0.34
HLA-B-258ENST00000640615 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
HLA-B-258ENST00000640615 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
HLA-B-258ENST00000640615 NUP155O75694 1391 aa12.91□□□□□ -0.34
HLA-B-258ENST00000640615 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
HLA-B-258ENST00000640615 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
HLA-B-258ENST00000640615 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
HLA-B-258ENST00000640615 GGT6Q6P531 493 aa12.89□□□□□ -0.35
HLA-B-258ENST00000640615 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
HLA-B-258ENST00000640615 KANK1Q14678 1352 aa12.86□□□□□ -0.35
HLA-B-258ENST00000640615 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
HLA-B-258ENST00000640615 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
HLA-B-258ENST00000640615 PZPP20742 1482 aa12.85□□□□□ -0.35
HLA-B-258ENST00000640615 PKD2Q13563 968 aa12.84□□□□□ -0.35
HLA-B-258ENST00000640615 MLECQ14165 292 aa12.84□□□□□ -0.35
HLA-B-258ENST00000640615 UNC13BO14795 1591 aa12.84□□□□□ -0.35
HLA-B-258ENST00000640615 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
HLA-B-258ENST00000640615 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
HLA-B-258ENST00000640615 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.35
HLA-B-258ENST00000640615 FOXD1Q16676 465 aa12.83□□□□□ -0.36
HLA-B-258ENST00000640615 AGLP35573 1532 aa12.83□□□□□ -0.36
HLA-B-258ENST00000640615 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
HLA-B-258ENST00000640615 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
HLA-B-258ENST00000640615 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
HLA-B-258ENST00000640615 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
HLA-B-258ENST00000640615 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
HLA-B-258ENST00000640615 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
HLA-B-258ENST00000640615 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
HLA-B-258ENST00000640615 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
HLA-B-258ENST00000640615 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
HLA-B-258ENST00000640615 PREX1Q8TCU6 1659 aa12.78□□□□□ -0.36
HLA-B-258ENST00000640615 SIN3AQ96ST3 1273 aa12.78□□□□□ -0.36
HLA-B-258ENST00000640615 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
HLA-B-258ENST00000640615 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.36
HLA-B-258ENST00000640615 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
HLA-B-258ENST00000640615 ABCC3O15438 1527 aa12.75□□□□□ -0.37
HLA-B-258ENST00000640615 ZEB1P37275 1124 aaPredicted RBP12.75□□□□□ -0.37
HLA-B-258ENST00000640615 HSPA2P54652 639 aa12.75□□□□□ -0.37
HLA-B-258ENST00000640615 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
HLA-B-258ENST00000640615 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
HLA-B-258ENST00000640615 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
HLA-B-258ENST00000640615 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
HLA-B-258ENST00000640615 TET3O43151 1660 aa12.73□□□□□ -0.37
HLA-B-258ENST00000640615 CEP152O94986 1710 aa12.71□□□□□ -0.37
HLA-B-258ENST00000640615 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.38
HLA-B-258ENST00000640615 NPATQ14207 1427 aa12.71□□□□□ -0.38
HLA-B-258ENST00000640615 E9PCH4 1651 aa12.7□□□□□ -0.38
HLA-B-258ENST00000640615 C3P01024 1663 aa12.7□□□□□ -0.38
HLA-B-258ENST00000640615 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 PLA2R1Q13018 1463 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
HLA-B-258ENST00000640615 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
HLA-B-258ENST00000640615 ARHGAP31Q2M1Z3 1444 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 CNTLNQ9NXG0 1405 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
HLA-B-258ENST00000640615 FBXO31Q5XUX0 539 aaPredicted RBP12.68□□□□□ -0.38
HLA-B-258ENST00000640615 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
HLA-B-258ENST00000640615 PTPRTO14522 1441 aa12.68□□□□□ -0.38
HLA-B-258ENST00000640615 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
HLA-B-258ENST00000640615 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
HLA-B-258ENST00000640615 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
HLA-B-258ENST00000640615 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
HLA-B-258ENST00000640615 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
HLA-B-258ENST00000640615 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
HLA-B-258ENST00000640615 MROH2AA6NES4 1674 aa12.66□□□□□ -0.38
HLA-B-258ENST00000640615 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
HLA-B-258ENST00000640615 NOS1P29475 1434 aa12.64□□□□□ -0.39
HLA-B-258ENST00000640615 TRPM2O94759 1503 aa12.64□□□□□ -0.39
HLA-B-258ENST00000640615 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
HLA-B-258ENST00000640615 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
HLA-B-258ENST00000640615 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
HLA-B-258ENST00000640615 ERVK-7P63135 1459 aa12.62□□□□□ -0.39
HLA-B-258ENST00000640615 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
HLA-B-258ENST00000640615 SLC52A1Q9NWF4 448 aa12.62□□□□□ -0.39
HLA-B-258ENST00000640615 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
HLA-B-258ENST00000640615 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
HLA-B-258ENST00000640615 IDI1Q13907 227 aa12.6□□□□□ -0.39
HLA-B-258ENST00000640615 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
HLA-B-258ENST00000640615 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
HLA-B-258ENST00000640615 TNRQ92752 1358 aa12.59□□□□□ -0.39
HLA-B-258ENST00000640615 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
HLA-B-258ENST00000640615 SYNMO15061 1565 aa12.59□□□□□ -0.39
HLA-B-258ENST00000640615 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
HLA-B-258ENST00000640615 SPATA31D1Q6ZQQ2 1576 aa12.58□□□□□ -0.4
HLA-B-258ENST00000640615 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
HLA-B-258ENST00000640615 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
HLA-B-258ENST00000640615 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
HLA-B-258ENST00000640615 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.4
HLA-B-258ENST00000640615 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
HLA-B-258ENST00000640615 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
HLA-B-258ENST00000640615 PIK3C2BO00750 1634 aa12.54□□□□□ -0.4
HLA-B-258ENST00000640615 MYO3AQ8NEV4 1616 aa12.53□□□□□ -0.4
HLA-B-258ENST00000640615 RPGRIP1LQ68CZ1 1315 aa12.52□□□□□ -0.41
HLA-B-258ENST00000640615 ADGRB3O60242 1522 aa12.52□□□□□ -0.41
HLA-B-258ENST00000640615 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms