RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
PAX6-268ENST00000640287 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
PAX6-268ENST00000640287 GCC2Q8IWJ2 1684 aa22.81■■□□□ 1.24
PAX6-268ENST00000640287 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
PAX6-268ENST00000640287 WASHC2CQ9Y4E1 1318 aa22.79■■□□□ 1.24
PAX6-268ENST00000640287 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
PAX6-268ENST00000640287 KANK1Q14678 1352 aa22.78■■□□□ 1.24
PAX6-268ENST00000640287 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
PAX6-268ENST00000640287 RIMS1Q86UR5 1692 aaKnown RBP22.77■■□□□ 1.24
PAX6-268ENST00000640287 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
PAX6-268ENST00000640287 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
PAX6-268ENST00000640287 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
PAX6-268ENST00000640287 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
PAX6-268ENST00000640287 DEPDC5O75140 1603 aa22.75■■□□□ 1.23
PAX6-268ENST00000640287 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
PAX6-268ENST00000640287 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
PAX6-268ENST00000640287 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
PAX6-268ENST00000640287 PTPRMP28827 1452 aa22.71■■□□□ 1.23
PAX6-268ENST00000640287 UNC13BO14795 1591 aa22.71■■□□□ 1.23
PAX6-268ENST00000640287 ABCC3O15438 1527 aa22.71■■□□□ 1.23
PAX6-268ENST00000640287 NUP155O75694 1391 aa22.7■■□□□ 1.22
PAX6-268ENST00000640287 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
PAX6-268ENST00000640287 ZC3H13Q5T200 1668 aaKnown RBP22.69■■□□□ 1.22
PAX6-268ENST00000640287 ZMYM3Q14202 1370 aa22.68■■□□□ 1.22
PAX6-268ENST00000640287 CEP152O94986 1710 aa22.67■■□□□ 1.22
PAX6-268ENST00000640287 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
PAX6-268ENST00000640287 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
PAX6-268ENST00000640287 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
PAX6-268ENST00000640287 VWDEQ8N2E2 1590 aa22.65■■□□□ 1.22
PAX6-268ENST00000640287 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
PAX6-268ENST00000640287 C3P01024 1663 aa22.63■■□□□ 1.21
PAX6-268ENST00000640287 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
PAX6-268ENST00000640287 LMTK2Q8IWU2 1503 aa22.62■■□□□ 1.21
PAX6-268ENST00000640287 IQGAP3Q86VI3 1631 aa22.62■■□□□ 1.21
PAX6-268ENST00000640287 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
PAX6-268ENST00000640287 PCGF6Q9BYE7 350 aa22.6■■□□□ 1.21
PAX6-268ENST00000640287 PZPP20742 1482 aa22.59■■□□□ 1.21
PAX6-268ENST00000640287 EFCAB6Q5THR3 1501 aa22.58■■□□□ 1.2
PAX6-268ENST00000640287 TET3O43151 1660 aa22.58■■□□□ 1.2
PAX6-268ENST00000640287 SLC4A1APQ9BWU0 796 aaKnown RBP22.57■■□□□ 1.2
PAX6-268ENST00000640287 FBXO31Q5XUX0 539 aaPredicted RBP22.56■■□□□ 1.2
PAX6-268ENST00000640287 NPATQ14207 1427 aa22.56■■□□□ 1.2
PAX6-268ENST00000640287 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
PAX6-268ENST00000640287 HRCP23327 699 aa22.54■■□□□ 1.2
PAX6-268ENST00000640287 RPRD2Q5VT52 1461 aaKnown RBP22.51■■□□□ 1.19
PAX6-268ENST00000640287 ERVK-7P63135 1459 aa22.51■■□□□ 1.19
PAX6-268ENST00000640287 PKD2Q13563 968 aa22.5■■□□□ 1.19
PAX6-268ENST00000640287 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
PAX6-268ENST00000640287 TNRQ92752 1358 aa22.5■■□□□ 1.19
PAX6-268ENST00000640287 E9PCH4 1651 aa22.49■■□□□ 1.19
PAX6-268ENST00000640287 CFAP65Q6ZU64 1925 aaKnown RBP22.48■■□□□ 1.19
PAX6-268ENST00000640287 PREX1Q8TCU6 1659 aa22.48■■□□□ 1.19
PAX6-268ENST00000640287 SPATA31D1Q6ZQQ2 1576 aa22.48■■□□□ 1.19
PAX6-268ENST00000640287 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
PAX6-268ENST00000640287 FOXD1Q16676 465 aa22.44■■□□□ 1.18
PAX6-268ENST00000640287 NOS1P29475 1434 aa22.43■■□□□ 1.18
PAX6-268ENST00000640287 MYO3AQ8NEV4 1616 aa22.43■■□□□ 1.18
PAX6-268ENST00000640287 SETD1BQ9UPS6 1966 aaKnown RBP22.42■■□□□ 1.18
PAX6-268ENST00000640287 NLRP1Q9C000 1473 aa22.39■■□□□ 1.18
PAX6-268ENST00000640287 SYNMO15061 1565 aa22.39■■□□□ 1.18
PAX6-268ENST00000640287 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
PAX6-268ENST00000640287 CEP170BQ9Y4F5 1589 aaPredicted RBP22.37■■□□□ 1.17
PAX6-268ENST00000640287 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
PAX6-268ENST00000640287 SLC52A1Q9NWF4 448 aa22.37■■□□□ 1.17
PAX6-268ENST00000640287 STAG3Q9UJ98 1225 aa22.36■■□□□ 1.17
PAX6-268ENST00000640287 PTPRTO14522 1441 aa22.36■■□□□ 1.17
PAX6-268ENST00000640287 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
PAX6-268ENST00000640287 IDI1Q13907 227 aa22.35■■□□□ 1.17
PAX6-268ENST00000640287 TRPM2O94759 1503 aa22.35■■□□□ 1.17
PAX6-268ENST00000640287 UGGT1Q9NYU2 1555 aa22.34■■□□□ 1.17
PAX6-268ENST00000640287 ZNF142P52746 1687 aaPredicted RBP22.33■■□□□ 1.17
PAX6-268ENST00000640287 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.16
PAX6-268ENST00000640287 HSPA2P54652 639 aa22.33■■□□□ 1.16
PAX6-268ENST00000640287 PLA2R1Q13018 1463 aa22.32■■□□□ 1.16
PAX6-268ENST00000640287 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
PAX6-268ENST00000640287 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
PAX6-268ENST00000640287 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
PAX6-268ENST00000640287 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
PAX6-268ENST00000640287 CLTCL1P53675 1640 aa22.27■■□□□ 1.16
PAX6-268ENST00000640287 ADGRB3O60242 1522 aa22.27■■□□□ 1.16
PAX6-268ENST00000640287 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
PAX6-268ENST00000640287 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
PAX6-268ENST00000640287 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
PAX6-268ENST00000640287 KDM5AP29375 1690 aaKnown RBP22.21■■□□□ 1.15
PAX6-268ENST00000640287 TMEM131LA2VDJ0 1609 aa22.21■■□□□ 1.15
PAX6-268ENST00000640287 KIF1BO60333 1816 aa22.19■■□□□ 1.14
PAX6-268ENST00000640287 TMEM2Q9UHN6 1383 aa22.19■■□□□ 1.14
PAX6-268ENST00000640287 ANKLE2Q86XL3 938 aa22.17■■□□□ 1.14
PAX6-268ENST00000640287 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
PAX6-268ENST00000640287 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
PAX6-268ENST00000640287 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
PAX6-268ENST00000640287 RGL3Q3MIN7 710 aa22.15■■□□□ 1.14
PAX6-268ENST00000640287 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
PAX6-268ENST00000640287 SLIT1O75093 1534 aa22.15■■□□□ 1.14
PAX6-268ENST00000640287 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
PAX6-268ENST00000640287 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
PAX6-268ENST00000640287 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
PAX6-268ENST00000640287 ARHGAP23Q9P227 1491 aa22.13■■□□□ 1.13
PAX6-268ENST00000640287 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
PAX6-268ENST00000640287 SCAF11Q99590 1463 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms