RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 MROH2AA6NES4 1674 aa10.21□□□□□ -0.78
PRKCH-228ENST00000640011 ZNF335Q9H4Z2 1342 aaPredicted RBP10.2□□□□□ -0.78
PRKCH-228ENST00000640011 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
PRKCH-228ENST00000640011 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
PRKCH-228ENST00000640011 TCOF1Q13428 1488 aaKnown RBP10.19□□□□□ -0.78
PRKCH-228ENST00000640011 CASKIN1Q8WXD9 1431 aa10.19□□□□□ -0.78
PRKCH-228ENST00000640011 TOM1O60784 492 aa10.19□□□□□ -0.78
PRKCH-228ENST00000640011 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
PRKCH-228ENST00000640011 KIAA1107Q9UPP5 1409 aa10.18□□□□□ -0.78
PRKCH-228ENST00000640011 KIDINS220Q9ULH0 1771 aa10.18□□□□□ -0.78
PRKCH-228ENST00000640011 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
PRKCH-228ENST00000640011 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-228ENST00000640011 SAMD9LQ8IVG5 1584 aa10.17□□□□□ -0.78
PRKCH-228ENST00000640011 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
PRKCH-228ENST00000640011 GGT6Q6P531 493 aa10.16□□□□□ -0.78
PRKCH-228ENST00000640011 CEP170BQ9Y4F5 1589 aaPredicted RBP10.16□□□□□ -0.78
PRKCH-228ENST00000640011 A2MP01023 1474 aa10.16□□□□□ -0.78
PRKCH-228ENST00000640011 ZNF142P52746 1687 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-228ENST00000640011 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-228ENST00000640011 CPS1P31327 1500 aa10.15□□□□□ -0.78
PRKCH-228ENST00000640011 ATP7AQ04656 1500 aa10.14□□□□□ -0.79
PRKCH-228ENST00000640011 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRKCH-228ENST00000640011 AMER1Q5JTC6 1135 aaPredicted RBP10.14□□□□□ -0.79
PRKCH-228ENST00000640011 A2ML1A8K2U0 1454 aa10.14□□□□□ -0.79
PRKCH-228ENST00000640011 MYO3AQ8NEV4 1616 aa10.14□□□□□ -0.79
PRKCH-228ENST00000640011 PLXNC1O60486 1568 aa10.14□□□□□ -0.79
PRKCH-228ENST00000640011 SYCP2Q9BX26 1530 aa10.13□□□□□ -0.79
PRKCH-228ENST00000640011 GPATCH8Q9UKJ3 1502 aaKnown RBP10.13□□□□□ -0.79
PRKCH-228ENST00000640011 FYCO1Q9BQS8 1478 aa10.13□□□□□ -0.79
PRKCH-228ENST00000640011 HSPA1LP34931 641 aa10.12□□□□□ -0.79
PRKCH-228ENST00000640011 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
PRKCH-228ENST00000640011 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
PRKCH-228ENST00000640011 CDC42BPAQ5VT25 1732 aa10.11□□□□□ -0.79
PRKCH-228ENST00000640011 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
PRKCH-228ENST00000640011 ANKLE2Q86XL3 938 aa10.11□□□□□ -0.79
PRKCH-228ENST00000640011 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
PRKCH-228ENST00000640011 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
PRKCH-228ENST00000640011 RTEL1-TNFRSF6BF6WH68 1400 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 CLTCQ00610 1675 aaKnown RBP10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SPDYE2Q495Y8 402 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SUPT6HQ7KZ85 1726 aaKnown RBP10.1□□□□□ -0.79
PRKCH-228ENST00000640011 LRRIQ1Q96JM4 1722 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
PRKCH-228ENST00000640011 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
PRKCH-228ENST00000640011 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
PRKCH-228ENST00000640011 DHX29Q7Z478 1369 aaKnown RBP10.09□□□□□ -0.79
PRKCH-228ENST00000640011 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
PRKCH-228ENST00000640011 TNRQ92752 1358 aa10.08□□□□□ -0.8
PRKCH-228ENST00000640011 PZPP20742 1482 aa10.07□□□□□ -0.8
PRKCH-228ENST00000640011 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
PRKCH-228ENST00000640011 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
PRKCH-228ENST00000640011 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
PRKCH-228ENST00000640011 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
PRKCH-228ENST00000640011 MED14O60244 1454 aa10.05□□□□□ -0.8
PRKCH-228ENST00000640011 KIF3BO15066 747 aa10.05□□□□□ -0.8
PRKCH-228ENST00000640011 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-228ENST00000640011 KDM5DQ9BY66 1539 aa10.05□□□□□ -0.8
PRKCH-228ENST00000640011 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
PRKCH-228ENST00000640011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRKCH-228ENST00000640011 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
PRKCH-228ENST00000640011 MBD5Q9P267 1494 aa10.04□□□□□ -0.8
PRKCH-228ENST00000640011 POLR1AO95602 1720 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-228ENST00000640011 NEURL4Q96JN8 1562 aa10.03□□□□□ -0.8
PRKCH-228ENST00000640011 UGGT1Q9NYU2 1555 aa10.03□□□□□ -0.8
PRKCH-228ENST00000640011 DEPDC5O75140 1603 aa10.03□□□□□ -0.8
PRKCH-228ENST00000640011 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-228ENST00000640011 VWDEQ8N2E2 1590 aa10.01□□□□□ -0.81
PRKCH-228ENST00000640011 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
PRKCH-228ENST00000640011 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
PRKCH-228ENST00000640011 CCDC141Q6ZP82 1450 aa10.01□□□□□ -0.81
PRKCH-228ENST00000640011 CEP162Q5TB80 1403 aa10□□□□□ -0.81
PRKCH-228ENST00000640011 EHBP1L1Q8N3D4 1523 aa10□□□□□ -0.81
PRKCH-228ENST00000640011 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
PRKCH-228ENST00000640011 SYNMO15061 1565 aa9.98□□□□□ -0.81
PRKCH-228ENST00000640011 TIAM1Q13009 1591 aa9.98□□□□□ -0.81
PRKCH-228ENST00000640011 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-228ENST00000640011 LRRC7Q96NW7 1537 aa9.97□□□□□ -0.81
PRKCH-228ENST00000640011 RNF17Q9BXT8 1623 aaKnown RBP9.97□□□□□ -0.81
PRKCH-228ENST00000640011 IQGAP1P46940 1657 aa9.96□□□□□ -0.81
PRKCH-228ENST00000640011 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
PRKCH-228ENST00000640011 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
PRKCH-228ENST00000640011 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
PRKCH-228ENST00000640011 ZC3H13Q5T200 1668 aaKnown RBP9.93□□□□□ -0.82
PRKCH-228ENST00000640011 SCAF11Q99590 1463 aaKnown RBP9.93□□□□□ -0.82
PRKCH-228ENST00000640011 FAM135BQ49AJ0 1406 aa9.93□□□□□ -0.82
PRKCH-228ENST00000640011 ARHGEF5Q12774 1597 aa9.92□□□□□ -0.82
PRKCH-228ENST00000640011 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
PRKCH-228ENST00000640011 TXNDC2Q86VQ3 553 aa9.92□□□□□ -0.82
PRKCH-228ENST00000640011 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
PRKCH-228ENST00000640011 ABCC3O15438 1527 aa9.92□□□□□ -0.82
PRKCH-228ENST00000640011 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
PRKCH-228ENST00000640011 SLIT1O75093 1534 aa9.9□□□□□ -0.82
PRKCH-228ENST00000640011 ARHGAP23Q9P227 1491 aa9.9□□□□□ -0.83
PRKCH-228ENST00000640011 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.83
PRKCH-228ENST00000640011 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms