RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 BCORL1Q5H9F3 1711 aa14.34□□□□□ -0.11
PAX6-246ENST00000638963 AGLP35573 1532 aa14.33□□□□□ -0.11
PAX6-246ENST00000638963 DEPDC5O75140 1603 aa14.33□□□□□ -0.12
PAX6-246ENST00000638963 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
PAX6-246ENST00000638963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.12
PAX6-246ENST00000638963 UNC13BO14795 1591 aa14.33□□□□□ -0.12
PAX6-246ENST00000638963 GGT6Q6P531 493 aa14.32□□□□□ -0.12
PAX6-246ENST00000638963 TRIM52Q96A61 297 aa14.3□□□□□ -0.12
PAX6-246ENST00000638963 CEP152O94986 1710 aa14.29□□□□□ -0.12
PAX6-246ENST00000638963 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
PAX6-246ENST00000638963 MYT1Q01538 1121 aa14.29□□□□□ -0.12
PAX6-246ENST00000638963 NUP155O75694 1391 aa14.28□□□□□ -0.12
PAX6-246ENST00000638963 PZPP20742 1482 aa14.27□□□□□ -0.13
PAX6-246ENST00000638963 VWDEQ8N2E2 1590 aa14.27□□□□□ -0.13
PAX6-246ENST00000638963 IQGAP3Q86VI3 1631 aa14.27□□□□□ -0.13
PAX6-246ENST00000638963 CLTCQ00610 1675 aaKnown RBP14.26□□□□□ -0.13
PAX6-246ENST00000638963 ABCC3O15438 1527 aa14.25□□□□□ -0.13
PAX6-246ENST00000638963 KDM5DQ9BY66 1539 aa14.25□□□□□ -0.13
PAX6-246ENST00000638963 FAM135AQ9P2D6 1515 aa14.25□□□□□ -0.13
PAX6-246ENST00000638963 FER1L4A9Z1Z3 1794 aa14.25□□□□□ -0.13
PAX6-246ENST00000638963 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
PAX6-246ENST00000638963 HRCP23327 699 aa14.23□□□□□ -0.13
PAX6-246ENST00000638963 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
PAX6-246ENST00000638963 KANK1Q14678 1352 aa14.22□□□□□ -0.13
PAX6-246ENST00000638963 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
PAX6-246ENST00000638963 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
PAX6-246ENST00000638963 ZC3H13Q5T200 1668 aaKnown RBP14.22□□□□□ -0.13
PAX6-246ENST00000638963 RIMS1Q86UR5 1692 aaKnown RBP14.22□□□□□ -0.13
PAX6-246ENST00000638963 FOXD1Q16676 465 aa14.22□□□□□ -0.13
PAX6-246ENST00000638963 TET3O43151 1660 aa14.21□□□□□ -0.13
PAX6-246ENST00000638963 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.14
PAX6-246ENST00000638963 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.14
PAX6-246ENST00000638963 E9PCH4 1651 aa14.2□□□□□ -0.14
PAX6-246ENST00000638963 CFAP65Q6ZU64 1925 aaKnown RBP14.2□□□□□ -0.14
PAX6-246ENST00000638963 LMTK2Q8IWU2 1503 aa14.2□□□□□ -0.14
PAX6-246ENST00000638963 DHX57Q6P158 1386 aaKnown RBP14.19□□□□□ -0.14
PAX6-246ENST00000638963 EFCAB6Q5THR3 1501 aa14.19□□□□□ -0.14
PAX6-246ENST00000638963 PKD2Q13563 968 aa14.18□□□□□ -0.14
PAX6-246ENST00000638963 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
PAX6-246ENST00000638963 ESF1Q9H501 851 aaKnown RBP14.17□□□□□ -0.14
PAX6-246ENST00000638963 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
PAX6-246ENST00000638963 C3P01024 1663 aa14.16□□□□□ -0.14
PAX6-246ENST00000638963 NPATQ14207 1427 aa14.16□□□□□ -0.14
PAX6-246ENST00000638963 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
PAX6-246ENST00000638963 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
PAX6-246ENST00000638963 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
PAX6-246ENST00000638963 ZMYM3Q14202 1370 aa14.14□□□□□ -0.15
PAX6-246ENST00000638963 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
PAX6-246ENST00000638963 FBXO31Q5XUX0 539 aaPredicted RBP14.13□□□□□ -0.15
PAX6-246ENST00000638963 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
PAX6-246ENST00000638963 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
PAX6-246ENST00000638963 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
PAX6-246ENST00000638963 ARHGAP31Q2M1Z3 1444 aa14.12□□□□□ -0.15
PAX6-246ENST00000638963 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
PAX6-246ENST00000638963 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
PAX6-246ENST00000638963 PLA2R1Q13018 1463 aa14.11□□□□□ -0.15
PAX6-246ENST00000638963 SYNMO15061 1565 aa14.1□□□□□ -0.15
PAX6-246ENST00000638963 PTPRMP28827 1452 aa14.1□□□□□ -0.15
PAX6-246ENST00000638963 ERVK-7P63135 1459 aa14.1□□□□□ -0.15
PAX6-246ENST00000638963 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
PAX6-246ENST00000638963 SPATA31D1Q6ZQQ2 1576 aa14.08□□□□□ -0.16
PAX6-246ENST00000638963 CLTCL1P53675 1640 aa14.08□□□□□ -0.16
PAX6-246ENST00000638963 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
PAX6-246ENST00000638963 PTPRTO14522 1441 aa14.07□□□□□ -0.16
PAX6-246ENST00000638963 NOS1P29475 1434 aa14.07□□□□□ -0.16
PAX6-246ENST00000638963 TRPM2O94759 1503 aa14.07□□□□□ -0.16
PAX6-246ENST00000638963 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
PAX6-246ENST00000638963 TNRQ92752 1358 aa14.04□□□□□ -0.16
PAX6-246ENST00000638963 PIK3C2BO00750 1634 aa14.03□□□□□ -0.16
PAX6-246ENST00000638963 NEUROD1Q13562 356 aa14.02□□□□□ -0.16
PAX6-246ENST00000638963 MYO3AQ8NEV4 1616 aa14.02□□□□□ -0.17
PAX6-246ENST00000638963 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.17
PAX6-246ENST00000638963 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
PAX6-246ENST00000638963 IDI1Q13907 227 aa14□□□□□ -0.17
PAX6-246ENST00000638963 KIF1BO60333 1816 aa13.99□□□□□ -0.17
PAX6-246ENST00000638963 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
PAX6-246ENST00000638963 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
PAX6-246ENST00000638963 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
PAX6-246ENST00000638963 ADGRB3O60242 1522 aa13.96□□□□□ -0.17
PAX6-246ENST00000638963 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.17
PAX6-246ENST00000638963 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
PAX6-246ENST00000638963 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.18
PAX6-246ENST00000638963 NLRP1Q9C000 1473 aa13.95□□□□□ -0.18
PAX6-246ENST00000638963 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
PAX6-246ENST00000638963 SPATA31E1Q6ZUB1 1445 aa13.95□□□□□ -0.18
PAX6-246ENST00000638963 RGL3Q3MIN7 710 aa13.95□□□□□ -0.18
PAX6-246ENST00000638963 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
PAX6-246ENST00000638963 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
PAX6-246ENST00000638963 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
PAX6-246ENST00000638963 UHRF1BP1Q6BDS2 1440 aa13.93□□□□□ -0.18
PAX6-246ENST00000638963 ZNF326Q5BKZ1 582 aaKnown RBP13.91□□□□□ -0.18
PAX6-246ENST00000638963 NUTM2DQ5VT03 806 aaPredicted RBP13.91□□□□□ -0.18
PAX6-246ENST00000638963 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PAX6-246ENST00000638963 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
PAX6-246ENST00000638963 KDM5AP29375 1690 aaKnown RBP13.9□□□□□ -0.19
PAX6-246ENST00000638963 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
PAX6-246ENST00000638963 PPLO60437 1756 aa13.89□□□□□ -0.19
PAX6-246ENST00000638963 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
PAX6-246ENST00000638963 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
PAX6-246ENST00000638963 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms