RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ITGAEP38570 1179 aa33.39■■■□□ 2.93
SCN1B-206ENST00000638536 EIF2AK4Q9P2K8 1649 aaKnown RBP33.39■■■□□ 2.93
SCN1B-206ENST00000638536 MROH2AA6NES4 1674 aa33.38■■■□□ 2.93
SCN1B-206ENST00000638536 ZMYM3Q14202 1370 aa33.37■■■□□ 2.93
SCN1B-206ENST00000638536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.37■■■□□ 2.93
SCN1B-206ENST00000638536 RNF17Q9BXT8 1623 aaKnown RBP33.37■■■□□ 2.93
SCN1B-206ENST00000638536 PPP6R1Q9UPN7 881 aa33.35■■■□□ 2.93
SCN1B-206ENST00000638536 MROH1Q8NDA8 1641 aa33.34■■■□□ 2.93
SCN1B-206ENST00000638536 ERBINQ96RT1 1412 aa33.33■■■□□ 2.93
SCN1B-206ENST00000638536 SETD1BQ9UPS6 1966 aaKnown RBP33.32■■■□□ 2.92
SCN1B-206ENST00000638536 LMTK3Q96Q04 1460 aa33.31■■■□□ 2.92
SCN1B-206ENST00000638536 KDM5DQ9BY66 1539 aa33.28■■■□□ 2.92
SCN1B-206ENST00000638536 WASHC2CQ9Y4E1 1318 aa33.28■■■□□ 2.92
SCN1B-206ENST00000638536 PREX1Q8TCU6 1659 aa33.24■■■□□ 2.91
SCN1B-206ENST00000638536 CEP152O94986 1710 aa33.23■■■□□ 2.91
SCN1B-206ENST00000638536 ABCC3O15438 1527 aa33.23■■■□□ 2.91
SCN1B-206ENST00000638536 DEPDC5O75140 1603 aa33.23■■■□□ 2.91
SCN1B-206ENST00000638536 ROCK1Q13464 1354 aa33.22■■■□□ 2.91
SCN1B-206ENST00000638536 ANKRD50Q9ULJ7 1429 aa33.21■■■□□ 2.91
SCN1B-206ENST00000638536 FAM135AQ9P2D6 1515 aa33.21■■■□□ 2.91
SCN1B-206ENST00000638536 HSPA2P54652 639 aa33.2■■■□□ 2.91
SCN1B-206ENST00000638536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.2■■■□□ 2.91
SCN1B-206ENST00000638536 PRDM15P57071 1507 aaPredicted RBP33.2■■■□□ 2.91
SCN1B-206ENST00000638536 FBXO31Q5XUX0 539 aaPredicted RBP33.19■■■□□ 2.9
SCN1B-206ENST00000638536 CFAP65Q6ZU64 1925 aaKnown RBP33.17■■■□□ 2.9
SCN1B-206ENST00000638536 ZC3H13Q5T200 1668 aaKnown RBP33.17■■■□□ 2.9
SCN1B-206ENST00000638536 NPATQ14207 1427 aa33.16■■■□□ 2.9
SCN1B-206ENST00000638536 UHRF1BP1Q6BDS2 1440 aa33.14■■■□□ 2.89
SCN1B-206ENST00000638536 PZPP20742 1482 aa33.13■■■□□ 2.89
SCN1B-206ENST00000638536 CAMSAP1Q5T5Y3 1602 aa33.12■■■□□ 2.89
SCN1B-206ENST00000638536 VWDEQ8N2E2 1590 aa33.1■■■□□ 2.89
SCN1B-206ENST00000638536 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
SCN1B-206ENST00000638536 KANK1Q14678 1352 aa33.04■■■□□ 2.88
SCN1B-206ENST00000638536 UNC13BO14795 1591 aa33.02■■■□□ 2.88
SCN1B-206ENST00000638536 NAIPQ13075 1403 aa33.01■■■□□ 2.87
SCN1B-206ENST00000638536 TNRQ92752 1358 aa33.01■■■□□ 2.87
SCN1B-206ENST00000638536 LMTK2Q8IWU2 1503 aa33■■■□□ 2.87
SCN1B-206ENST00000638536 SPATA31D1Q6ZQQ2 1576 aa32.98■■■□□ 2.87
SCN1B-206ENST00000638536 ERVK-7P63135 1459 aa32.98■■■□□ 2.87
SCN1B-206ENST00000638536 ARHGAP31Q2M1Z3 1444 aa32.97■■■□□ 2.87
SCN1B-206ENST00000638536 ZNF142P52746 1687 aaPredicted RBP32.97■■■□□ 2.87
SCN1B-206ENST00000638536 GCC2Q8IWJ2 1684 aa32.97■■■□□ 2.87
SCN1B-206ENST00000638536 CEP170BQ9Y4F5 1589 aaPredicted RBP32.97■■■□□ 2.87
SCN1B-206ENST00000638536 STRCQ7RTU9 1775 aa32.95■■■□□ 2.86
SCN1B-206ENST00000638536 EFCAB6Q5THR3 1501 aa32.92■■■□□ 2.86
SCN1B-206ENST00000638536 HFM1A2PYH4 1435 aa32.92■■■□□ 2.86
SCN1B-206ENST00000638536 A2ML1A8K2U0 1454 aa32.9■■■□□ 2.86
SCN1B-206ENST00000638536 IQGAP3Q86VI3 1631 aa32.89■■■□□ 2.86
SCN1B-206ENST00000638536 NUP155O75694 1391 aa32.89■■■□□ 2.85
SCN1B-206ENST00000638536 TET3O43151 1660 aa32.88■■■□□ 2.85
SCN1B-206ENST00000638536 NLRP1Q9C000 1473 aa32.84■■■□□ 2.85
SCN1B-206ENST00000638536 E9PCH4 1651 aa32.82■■■□□ 2.85
SCN1B-206ENST00000638536 SYNMO15061 1565 aa32.81■■■□□ 2.84
SCN1B-206ENST00000638536 NOS1P29475 1434 aa32.8■■■□□ 2.84
SCN1B-206ENST00000638536 UGGT1Q9NYU2 1555 aa32.79■■■□□ 2.84
SCN1B-206ENST00000638536 NCKAP5LQ9HCH0 1330 aa32.77■■■□□ 2.84
SCN1B-206ENST00000638536 RPRD2Q5VT52 1461 aaKnown RBP32.77■■■□□ 2.84
SCN1B-206ENST00000638536 UBR1Q8IWV7 1749 aa32.74■■■□□ 2.83
SCN1B-206ENST00000638536 PLA2R1Q13018 1463 aa32.74■■■□□ 2.83
SCN1B-206ENST00000638536 PIK3C2BO00750 1634 aa32.73■■■□□ 2.83
SCN1B-206ENST00000638536 IDI1Q13907 227 aa32.73■■■□□ 2.83
SCN1B-206ENST00000638536 TRIM52Q96A61 297 aa32.7■■■□□ 2.83
SCN1B-206ENST00000638536 THEMISQ8N1K5 641 aaPredicted RBP32.69■■■□□ 2.82
SCN1B-206ENST00000638536 POLR1AO95602 1720 aaPredicted RBP32.64■■■□□ 2.82
SCN1B-206ENST00000638536 DMRT2Q9Y5R5 561 aa32.64■■■□□ 2.82
SCN1B-206ENST00000638536 SETD5Q9C0A6 1442 aa32.64■■■□□ 2.82
SCN1B-206ENST00000638536 PKD2Q13563 968 aa32.63■■■□□ 2.81
SCN1B-206ENST00000638536 PTPRTO14522 1441 aa32.63■■■□□ 2.81
SCN1B-206ENST00000638536 NEURL4Q96JN8 1562 aa32.62■■■□□ 2.81
SCN1B-206ENST00000638536 MYO5BQ9ULV0 1848 aa32.61■■■□□ 2.81
SCN1B-206ENST00000638536 SLC52A1Q9NWF4 448 aa32.61■■■□□ 2.81
SCN1B-206ENST00000638536 SPHKAPQ2M3C7 1700 aa32.59■■■□□ 2.81
SCN1B-206ENST00000638536 ANKLE2Q86XL3 938 aa32.59■■■□□ 2.81
SCN1B-206ENST00000638536 STAG3Q9UJ98 1225 aa32.58■■■□□ 2.81
SCN1B-206ENST00000638536 SLC4A1APQ9BWU0 796 aaKnown RBP32.57■■■□□ 2.8
SCN1B-206ENST00000638536 RAB3GAP2Q9H2M9 1393 aa32.57■■■□□ 2.8
SCN1B-206ENST00000638536 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
SCN1B-206ENST00000638536 ADGRB3O60242 1522 aa32.56■■■□□ 2.8
SCN1B-206ENST00000638536 ARHGAP23Q9P227 1491 aa32.55■■■□□ 2.8
SCN1B-206ENST00000638536 LTKP29376 864 aa32.55■■■□□ 2.8
SCN1B-206ENST00000638536 SLIT1O75093 1534 aa32.54■■■□□ 2.8
SCN1B-206ENST00000638536 TMEM131LA2VDJ0 1609 aa32.52■■■□□ 2.8
SCN1B-206ENST00000638536 FOXD1Q16676 465 aa32.51■■■□□ 2.8
SCN1B-206ENST00000638536 TMEM2Q9UHN6 1383 aa32.51■■■□□ 2.8
SCN1B-206ENST00000638536 MED14O60244 1454 aa32.49■■■□□ 2.79
SCN1B-206ENST00000638536 TXNDC2Q86VQ3 553 aa32.48■■■□□ 2.79
SCN1B-206ENST00000638536 MPHOSPH9Q99550 1183 aa32.48■■■□□ 2.79
SCN1B-206ENST00000638536 NPHP4O75161 1426 aaPredicted RBP32.48■■■□□ 2.79
SCN1B-206ENST00000638536 CHGAP10645 457 aaKnown RBP32.48■■■□□ 2.79
SCN1B-206ENST00000638536 SCAF11Q99590 1463 aaKnown RBP32.47■■■□□ 2.79
SCN1B-206ENST00000638536 CLTCL1P53675 1640 aa32.46■■■□□ 2.79
SCN1B-206ENST00000638536 IQGAP1P46940 1657 aa32.45■■■□□ 2.79
SCN1B-206ENST00000638536 TRPM2O94759 1503 aa32.45■■■□□ 2.78
SCN1B-206ENST00000638536 ZNF335Q9H4Z2 1342 aaPredicted RBP32.44■■■□□ 2.78
SCN1B-206ENST00000638536 LTBP4Q8N2S1 1624 aa32.41■■■□□ 2.78
SCN1B-206ENST00000638536 EID1Q9Y6B2 187 aa32.4■■■□□ 2.78
SCN1B-206ENST00000638536 ZFYVE9O95405 1425 aa32.39■■■□□ 2.78
SCN1B-206ENST00000638536 SENP3Q9H4L4 574 aaPredicted RBP32.37■■■□□ 2.77
SCN1B-206ENST00000638536 NUTM2DQ5VT03 806 aaPredicted RBP32.36■■■□□ 2.77
SCN1B-206ENST00000638536 RIMS2Q9UQ26 1411 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms