RNA–Protein interactions for RNA: ENST00000638304.1

GFAP-226, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,139 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-226ENST00000638304 HRCP23327 699 aa20.23■□□□□ 0.83
GFAP-226ENST00000638304 FOXD1Q16676 465 aa20.21■□□□□ 0.83
GFAP-226ENST00000638304 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
GFAP-226ENST00000638304 MROH1Q8NDA8 1641 aa20.21■□□□□ 0.83
GFAP-226ENST00000638304 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
GFAP-226ENST00000638304 PZPP20742 1482 aa20.2■□□□□ 0.82
GFAP-226ENST00000638304 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
GFAP-226ENST00000638304 MPHOSPH9Q99550 1183 aa20.18■□□□□ 0.82
GFAP-226ENST00000638304 UNC13BO14795 1591 aa20.18■□□□□ 0.82
GFAP-226ENST00000638304 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
GFAP-226ENST00000638304 AGLP35573 1532 aa20.17■□□□□ 0.82
GFAP-226ENST00000638304 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
GFAP-226ENST00000638304 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
GFAP-226ENST00000638304 PRDM15P57071 1507 aaPredicted RBP20.15■□□□□ 0.82
GFAP-226ENST00000638304 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
GFAP-226ENST00000638304 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
GFAP-226ENST00000638304 BCORL1Q5H9F3 1711 aa20.14■□□□□ 0.81
GFAP-226ENST00000638304 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
GFAP-226ENST00000638304 PKD2Q13563 968 aa20.13■□□□□ 0.81
GFAP-226ENST00000638304 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
GFAP-226ENST00000638304 VWDEQ8N2E2 1590 aa20.11■□□□□ 0.81
GFAP-226ENST00000638304 KANK1Q14678 1352 aa20.11■□□□□ 0.81
GFAP-226ENST00000638304 IQGAP3Q86VI3 1631 aa20.1■□□□□ 0.81
GFAP-226ENST00000638304 ABCC3O15438 1527 aa20.09■□□□□ 0.81
GFAP-226ENST00000638304 CEP152O94986 1710 aa20.07■□□□□ 0.8
GFAP-226ENST00000638304 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
GFAP-226ENST00000638304 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
GFAP-226ENST00000638304 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
GFAP-226ENST00000638304 NPATQ14207 1427 aa20.02■□□□□ 0.8
GFAP-226ENST00000638304 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.8
GFAP-226ENST00000638304 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.79
GFAP-226ENST00000638304 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.79
GFAP-226ENST00000638304 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
GFAP-226ENST00000638304 EFCAB6Q5THR3 1501 aa20.01■□□□□ 0.79
GFAP-226ENST00000638304 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
GFAP-226ENST00000638304 E9PCH4 1651 aa20■□□□□ 0.79
GFAP-226ENST00000638304 TET3O43151 1660 aa20■□□□□ 0.79
GFAP-226ENST00000638304 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
GFAP-226ENST00000638304 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
GFAP-226ENST00000638304 ANKRD30BQ9BXX2 1392 aa19.99■□□□□ 0.79
GFAP-226ENST00000638304 CAMSAP1Q5T5Y3 1602 aa19.99■□□□□ 0.79
GFAP-226ENST00000638304 ZMYM3Q14202 1370 aa19.98■□□□□ 0.79
GFAP-226ENST00000638304 MADDQ8WXG6 1647 aa19.97■□□□□ 0.79
GFAP-226ENST00000638304 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
GFAP-226ENST00000638304 ZC3H13Q5T200 1668 aaKnown RBP19.96■□□□□ 0.79
GFAP-226ENST00000638304 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
GFAP-226ENST00000638304 FER1L4A9Z1Z3 1794 aa19.93■□□□□ 0.78
GFAP-226ENST00000638304 ADAMTSL3P82987 1691 aa19.93■□□□□ 0.78
GFAP-226ENST00000638304 UGGT1Q9NYU2 1555 aa19.93■□□□□ 0.78
GFAP-226ENST00000638304 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
GFAP-226ENST00000638304 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
GFAP-226ENST00000638304 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
GFAP-226ENST00000638304 PTPRTO14522 1441 aa19.91■□□□□ 0.78
GFAP-226ENST00000638304 RIMS1Q86UR5 1692 aaKnown RBP19.9■□□□□ 0.78
GFAP-226ENST00000638304 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
GFAP-226ENST00000638304 NOS1P29475 1434 aa19.88■□□□□ 0.77
GFAP-226ENST00000638304 ERVK-7P63135 1459 aa19.88■□□□□ 0.77
GFAP-226ENST00000638304 MYT1Q01538 1121 aa19.88■□□□□ 0.77
GFAP-226ENST00000638304 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
GFAP-226ENST00000638304 SYNMO15061 1565 aa19.87■□□□□ 0.77
GFAP-226ENST00000638304 CCDC144AA2RUR9 1427 aa19.86■□□□□ 0.77
GFAP-226ENST00000638304 TRPM2O94759 1503 aa19.86■□□□□ 0.77
GFAP-226ENST00000638304 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
GFAP-226ENST00000638304 C3P01024 1663 aa19.85■□□□□ 0.77
GFAP-226ENST00000638304 PREX1Q8TCU6 1659 aa19.85■□□□□ 0.77
GFAP-226ENST00000638304 IDI1Q13907 227 aa19.84■□□□□ 0.77
GFAP-226ENST00000638304 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
GFAP-226ENST00000638304 CLTCL1P53675 1640 aa19.84■□□□□ 0.77
GFAP-226ENST00000638304 PTPRMP28827 1452 aa19.83■□□□□ 0.77
GFAP-226ENST00000638304 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
GFAP-226ENST00000638304 SPATA31D1Q6ZQQ2 1576 aa19.82■□□□□ 0.76
GFAP-226ENST00000638304 TNRQ92752 1358 aa19.81■□□□□ 0.76
GFAP-226ENST00000638304 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
GFAP-226ENST00000638304 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
GFAP-226ENST00000638304 SLC52A1Q9NWF4 448 aa19.76■□□□□ 0.75
GFAP-226ENST00000638304 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
GFAP-226ENST00000638304 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
GFAP-226ENST00000638304 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
GFAP-226ENST00000638304 NUTM2DQ5VT03 806 aaPredicted RBP19.72■□□□□ 0.75
GFAP-226ENST00000638304 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
GFAP-226ENST00000638304 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
GFAP-226ENST00000638304 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
GFAP-226ENST00000638304 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
GFAP-226ENST00000638304 DCAF11Q8TEB1 546 aa19.7■□□□□ 0.74
GFAP-226ENST00000638304 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
GFAP-226ENST00000638304 TMEM131LA2VDJ0 1609 aa19.67■□□□□ 0.74
GFAP-226ENST00000638304 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
GFAP-226ENST00000638304 MYO3AQ8NEV4 1616 aa19.67■□□□□ 0.74
GFAP-226ENST00000638304 NLRP1Q9C000 1473 aa19.66■□□□□ 0.74
GFAP-226ENST00000638304 KIF1BO60333 1816 aa19.65■□□□□ 0.74
GFAP-226ENST00000638304 MYO5BQ9ULV0 1848 aa19.65■□□□□ 0.74
GFAP-226ENST00000638304 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
GFAP-226ENST00000638304 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
GFAP-226ENST00000638304 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
GFAP-226ENST00000638304 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
GFAP-226ENST00000638304 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
GFAP-226ENST00000638304 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
GFAP-226ENST00000638304 UBR1Q8IWV7 1749 aa19.61■□□□□ 0.73
GFAP-226ENST00000638304 UHRF1BP1Q6BDS2 1440 aa19.61■□□□□ 0.73
GFAP-226ENST00000638304 NEXMIFQ5QGS0 1516 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms