RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	MLEC	Q14165	292 aa		33.6	■■■□□ 2.97
CHRNA7-231	ENST00000637786	MROH1	Q8NDA8	1641 aa		33.6	■■■□□ 2.97
CHRNA7-231	ENST00000637786	PRDM15	P57071	1507 aa	Predicted RBP	33.59	■■■□□ 2.97
CHRNA7-231	ENST00000637786	GGT6	Q6P531	493 aa		33.59	■■■□□ 2.97
CHRNA7-231	ENST00000637786	FER1L4	A9Z1Z3	1794 aa		33.57	■■■□□ 2.97
CHRNA7-231	ENST00000637786	UNC13B	O14795	1591 aa		33.56	■■■□□ 2.96
CHRNA7-231	ENST00000637786	SETD5	Q9C0A6	1442 aa		33.55	■■■□□ 2.96
CHRNA7-231	ENST00000637786	MADD	Q8WXG6	1647 aa		33.55	■■■□□ 2.96
CHRNA7-231	ENST00000637786	KDM5D	Q9BY66	1539 aa		33.53	■■■□□ 2.96
CHRNA7-231	ENST00000637786	CNTLN	Q9NXG0	1405 aa		33.53	■■■□□ 2.96
CHRNA7-231	ENST00000637786	ZC3H13	Q5T200	1668 aa	Known RBP	33.52	■■■□□ 2.96
CHRNA7-231	ENST00000637786	VWDE	Q8N2E2	1590 aa		33.51	■■■□□ 2.95
CHRNA7-231	ENST00000637786	KANK1	Q14678	1352 aa		33.49	■■■□□ 2.95
CHRNA7-231	ENST00000637786	KDM4F	A0A1W2PPD8	638 aa		33.49	■■■□□ 2.95
CHRNA7-231	ENST00000637786	ACIN1	Q9UKV3	1341 aa	Known RBP	33.49	■■■□□ 2.95
CHRNA7-231	ENST00000637786	ESF1	Q9H501	851 aa	Known RBP	33.48	■■■□□ 2.95
CHRNA7-231	ENST00000637786	MROH2A	A6NES4	1674 aa		33.48	■■■□□ 2.95
CHRNA7-231	ENST00000637786	CLTC	Q00610	1675 aa	Known RBP	33.46	■■■□□ 2.95
CHRNA7-231	ENST00000637786	RIMS1	Q86UR5	1692 aa	Known RBP	33.46	■■■□□ 2.95
CHRNA7-231	ENST00000637786	ABCC3	O15438	1527 aa		33.46	■■■□□ 2.95
CHRNA7-231	ENST00000637786	WASHC2C	Q9Y4E1	1318 aa		33.45	■■■□□ 2.95
CHRNA7-231	ENST00000637786	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.44	■■■□□ 2.94
CHRNA7-231	ENST00000637786	RAB3GAP2	Q9H2M9	1393 aa		33.44	■■■□□ 2.94
CHRNA7-231	ENST00000637786	LMTK2	Q8IWU2	1503 aa		33.43	■■■□□ 2.94
CHRNA7-231	ENST00000637786	IQGAP3	Q86VI3	1631 aa		33.42	■■■□□ 2.94
CHRNA7-231	ENST00000637786	CEP152	O94986	1710 aa		33.42	■■■□□ 2.94
CHRNA7-231	ENST00000637786	HRC	P23327	699 aa		33.42	■■■□□ 2.94
CHRNA7-231	ENST00000637786	NUP155	O75694	1391 aa		33.39	■■■□□ 2.94
CHRNA7-231	ENST00000637786	PTPRM	P28827	1452 aa		33.37	■■■□□ 2.93
CHRNA7-231	ENST00000637786	CAMSAP1	Q5T5Y3	1602 aa		33.36	■■■□□ 2.93
CHRNA7-231	ENST00000637786	TET3	O43151	1660 aa		33.35	■■■□□ 2.93
CHRNA7-231	ENST00000637786	ZMYM3	Q14202	1370 aa		33.34	■■■□□ 2.93
CHRNA7-231	ENST00000637786	C3	P01024	1663 aa		33.34	■■■□□ 2.93
CHRNA7-231	ENST00000637786	ARHGAP31	Q2M1Z3	1444 aa		33.32	■■■□□ 2.92
CHRNA7-231	ENST00000637786	TRIM52	Q96A61	297 aa		33.31	■■■□□ 2.92
CHRNA7-231	ENST00000637786	EFCAB6	Q5THR3	1501 aa		33.31	■■■□□ 2.92
CHRNA7-231	ENST00000637786	PZP	P20742	1482 aa		33.3	■■■□□ 2.92
CHRNA7-231	ENST00000637786	PCGF6	Q9BYE7	350 aa		33.26	■■■□□ 2.91
CHRNA7-231	ENST00000637786	RPRD2	Q5VT52	1461 aa	Known RBP	33.25	■■■□□ 2.91
CHRNA7-231	ENST00000637786	NPAT	Q14207	1427 aa		33.23	■■■□□ 2.91
CHRNA7-231	ENST00000637786	CEBPA	P49715	358 aa	Predicted RBP	33.21	■■■□□ 2.91
CHRNA7-231	ENST00000637786		E9PCH4	1651 aa		33.2	■■■□□ 2.91
CHRNA7-231	ENST00000637786	SETD1B	Q9UPS6	1966 aa	Known RBP	33.18	■■■□□ 2.9
CHRNA7-231	ENST00000637786	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.18	■■■□□ 2.9
CHRNA7-231	ENST00000637786	SPATA31D1	Q6ZQQ2	1576 aa		33.17	■■■□□ 2.9
CHRNA7-231	ENST00000637786	PREX1	Q8TCU6	1659 aa		33.17	■■■□□ 2.9
CHRNA7-231	ENST00000637786	CFAP65	Q6ZU64	1925 aa	Known RBP	33.16	■■■□□ 2.9
CHRNA7-231	ENST00000637786	ERVK-7	P63135	1459 aa		33.15	■■■□□ 2.9
CHRNA7-231	ENST00000637786	MPHOSPH9	Q99550	1183 aa		33.15	■■■□□ 2.9
CHRNA7-231	ENST00000637786	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.12	■■■□□ 2.89
CHRNA7-231	ENST00000637786	NOS1	P29475	1434 aa		33.11	■■■□□ 2.89
CHRNA7-231	ENST00000637786	PKD2	Q13563	968 aa		33.1	■■■□□ 2.89
CHRNA7-231	ENST00000637786	PLPPR3	Q6T4P5	718 aa		33.1	■■■□□ 2.89
CHRNA7-231	ENST00000637786	TNR	Q92752	1358 aa		33.08	■■■□□ 2.89
CHRNA7-231	ENST00000637786	SPHKAP	Q2M3C7	1700 aa		33.05	■■■□□ 2.88
CHRNA7-231	ENST00000637786	PTPRT	O14522	1441 aa		33.04	■■■□□ 2.88
CHRNA7-231	ENST00000637786	SYNM	O15061	1565 aa		33.03	■■■□□ 2.88
CHRNA7-231	ENST00000637786	MYO3A	Q8NEV4	1616 aa		33.01	■■■□□ 2.87
CHRNA7-231	ENST00000637786	NLRP1	Q9C000	1473 aa		33	■■■□□ 2.87
CHRNA7-231	ENST00000637786	TRPM2	O94759	1503 aa		32.97	■■■□□ 2.87
CHRNA7-231	ENST00000637786	UHRF1BP1	Q6BDS2	1440 aa		32.96	■■■□□ 2.87
CHRNA7-231	ENST00000637786	SLC52A1	Q9NWF4	448 aa		32.96	■■■□□ 2.87
CHRNA7-231	ENST00000637786	ZNF142	P52746	1687 aa	Predicted RBP	32.96	■■■□□ 2.87
CHRNA7-231	ENST00000637786	PIK3C2B	O00750	1634 aa		32.95	■■■□□ 2.87
CHRNA7-231	ENST00000637786	PLA2R1	Q13018	1463 aa		32.95	■■■□□ 2.87
CHRNA7-231	ENST00000637786	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.95	■■■□□ 2.87
CHRNA7-231	ENST00000637786	FOXD1	Q16676	465 aa		32.93	■■■□□ 2.86
CHRNA7-231	ENST00000637786	A2ML1	A8K2U0	1454 aa		32.93	■■■□□ 2.86
CHRNA7-231	ENST00000637786	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.92	■■■□□ 2.86
CHRNA7-231	ENST00000637786	DHX57	Q6P158	1386 aa	Known RBP	32.91	■■■□□ 2.86
CHRNA7-231	ENST00000637786	KDM5A	P29375	1690 aa	Known RBP	32.89	■■■□□ 2.86
CHRNA7-231	ENST00000637786	LMTK3	Q96Q04	1460 aa		32.87	■■■□□ 2.85
CHRNA7-231	ENST00000637786	IDI1	Q13907	227 aa		32.87	■■■□□ 2.85
CHRNA7-231	ENST00000637786	UGGT1	Q9NYU2	1555 aa		32.87	■■■□□ 2.85
CHRNA7-231	ENST00000637786	ANKRD30B	Q9BXX2	1392 aa		32.86	■■■□□ 2.85
CHRNA7-231	ENST00000637786	CLTCL1	P53675	1640 aa		32.86	■■■□□ 2.85
CHRNA7-231	ENST00000637786	UBR1	Q8IWV7	1749 aa		32.82	■■■□□ 2.85
CHRNA7-231	ENST00000637786	CCDC144A	A2RUR9	1427 aa		32.82	■■■□□ 2.84
CHRNA7-231	ENST00000637786	ADGRB3	O60242	1522 aa		32.81	■■■□□ 2.84
CHRNA7-231	ENST00000637786	KIF1B	O60333	1816 aa		32.79	■■■□□ 2.84
CHRNA7-231	ENST00000637786	TMEM131L	A2VDJ0	1609 aa		32.78	■■■□□ 2.84
CHRNA7-231	ENST00000637786	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.75	■■■□□ 2.83
CHRNA7-231	ENST00000637786	STAG3	Q9UJ98	1225 aa		32.74	■■■□□ 2.83
CHRNA7-231	ENST00000637786	MYO5B	Q9ULV0	1848 aa		32.73	■■■□□ 2.83
CHRNA7-231	ENST00000637786	NEURL4	Q96JN8	1562 aa		32.72	■■■□□ 2.83
CHRNA7-231	ENST00000637786	SLIT1	O75093	1534 aa		32.67	■■■□□ 2.82
CHRNA7-231	ENST00000637786	ARHGAP23	Q9P227	1491 aa		32.67	■■■□□ 2.82
CHRNA7-231	ENST00000637786	CHGA	P10645	457 aa	Known RBP	32.66	■■■□□ 2.82
CHRNA7-231	ENST00000637786	SPATA31E1	Q6ZUB1	1445 aa		32.66	■■■□□ 2.82
CHRNA7-231	ENST00000637786	HSPA2	P54652	639 aa		32.64	■■■□□ 2.82
CHRNA7-231	ENST00000637786	TMEM2	Q9UHN6	1383 aa		32.64	■■■□□ 2.82
CHRNA7-231	ENST00000637786	CLSPN	Q9HAW4	1339 aa		32.63	■■■□□ 2.81
CHRNA7-231	ENST00000637786	ZFYVE9	O95405	1425 aa		32.59	■■■□□ 2.81
CHRNA7-231	ENST00000637786	POLR1A	O95602	1720 aa	Predicted RBP	32.57	■■■□□ 2.81
CHRNA7-231	ENST00000637786	RPGRIP1L	Q68CZ1	1315 aa		32.57	■■■□□ 2.8
CHRNA7-231	ENST00000637786	HDGF	P51858	240 aa	Known RBP	32.56	■■■□□ 2.8
CHRNA7-231	ENST00000637786	RIMS2	Q9UQ26	1411 aa		32.56	■■■□□ 2.8
CHRNA7-231	ENST00000637786	ZNF326	Q5BKZ1	582 aa	Known RBP	32.55	■■■□□ 2.8
CHRNA7-231	ENST00000637786	ANKLE2	Q86XL3	938 aa		32.55	■■■□□ 2.8
CHRNA7-231	ENST00000637786	STRC	Q7RTU9	1775 aa		32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms