RNA–Protein interactions for RNA: ENST00000637637.1

C11orf53-203, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 1 (best) BASIC

Gene C11orf53, Length 1,049 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-203ENST00000637637 KANK1Q14678 1352 aa23.77■■□□□ 1.4
C11orf53-203ENST00000637637 MADDQ8WXG6 1647 aa23.77■■□□□ 1.4
C11orf53-203ENST00000637637 PTPRMP28827 1452 aa23.76■■□□□ 1.39
C11orf53-203ENST00000637637 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
C11orf53-203ENST00000637637 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
C11orf53-203ENST00000637637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.39
C11orf53-203ENST00000637637 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
C11orf53-203ENST00000637637 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.39
C11orf53-203ENST00000637637 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
C11orf53-203ENST00000637637 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
C11orf53-203ENST00000637637 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
C11orf53-203ENST00000637637 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
C11orf53-203ENST00000637637 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
C11orf53-203ENST00000637637 CEBPAP49715 358 aaPredicted RBP23.66■■□□□ 1.38
C11orf53-203ENST00000637637 NAIPQ13075 1403 aa23.65■■□□□ 1.38
C11orf53-203ENST00000637637 MROH2AA6NES4 1674 aa23.62■■□□□ 1.37
C11orf53-203ENST00000637637 PRDM15P57071 1507 aaPredicted RBP23.62■■□□□ 1.37
C11orf53-203ENST00000637637 CLTCQ00610 1675 aaKnown RBP23.6■■□□□ 1.37
C11orf53-203ENST00000637637 ABCC3O15438 1527 aa23.59■■□□□ 1.37
C11orf53-203ENST00000637637 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
C11orf53-203ENST00000637637 NUP155O75694 1391 aa23.59■■□□□ 1.37
C11orf53-203ENST00000637637 ZC3H13Q5T200 1668 aaKnown RBP23.59■■□□□ 1.37
C11orf53-203ENST00000637637 NPATQ14207 1427 aa23.59■■□□□ 1.37
C11orf53-203ENST00000637637 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
C11orf53-203ENST00000637637 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
C11orf53-203ENST00000637637 SETD5Q9C0A6 1442 aa23.55■■□□□ 1.36
C11orf53-203ENST00000637637 PZPP20742 1482 aa23.55■■□□□ 1.36
C11orf53-203ENST00000637637 GCC2Q8IWJ2 1684 aa23.54■■□□□ 1.36
C11orf53-203ENST00000637637 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
C11orf53-203ENST00000637637 ARHGAP31Q2M1Z3 1444 aa23.54■■□□□ 1.36
C11orf53-203ENST00000637637 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
C11orf53-203ENST00000637637 C3P01024 1663 aa23.54■■□□□ 1.36
C11orf53-203ENST00000637637 UNC13BO14795 1591 aa23.52■■□□□ 1.36
C11orf53-203ENST00000637637 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
C11orf53-203ENST00000637637 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
C11orf53-203ENST00000637637 SETD1BQ9UPS6 1966 aaKnown RBP23.5■■□□□ 1.35
C11orf53-203ENST00000637637 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
C11orf53-203ENST00000637637 TNRQ92752 1358 aa23.49■■□□□ 1.35
C11orf53-203ENST00000637637 HRCP23327 699 aa23.48■■□□□ 1.35
C11orf53-203ENST00000637637 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
C11orf53-203ENST00000637637 CEP152O94986 1710 aa23.46■■□□□ 1.35
C11orf53-203ENST00000637637 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
C11orf53-203ENST00000637637 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
C11orf53-203ENST00000637637 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
C11orf53-203ENST00000637637 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
C11orf53-203ENST00000637637 ERVK-7P63135 1459 aa23.43■■□□□ 1.34
C11orf53-203ENST00000637637 RAB3GAP2Q9H2M9 1393 aa23.42■■□□□ 1.34
C11orf53-203ENST00000637637 TET3O43151 1660 aa23.41■■□□□ 1.34
C11orf53-203ENST00000637637 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
C11orf53-203ENST00000637637 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
C11orf53-203ENST00000637637 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
C11orf53-203ENST00000637637 SPATA31D1Q6ZQQ2 1576 aa23.4■■□□□ 1.34
C11orf53-203ENST00000637637 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
C11orf53-203ENST00000637637 PKD2Q13563 968 aa23.37■■□□□ 1.33
C11orf53-203ENST00000637637 THEMISQ8N1K5 641 aaPredicted RBP23.37■■□□□ 1.33
C11orf53-203ENST00000637637 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
C11orf53-203ENST00000637637 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
C11orf53-203ENST00000637637 A2ML1A8K2U0 1454 aa23.36■■□□□ 1.33
C11orf53-203ENST00000637637 NOS1P29475 1434 aa23.35■■□□□ 1.33
C11orf53-203ENST00000637637 HSPA2P54652 639 aa23.33■■□□□ 1.33
C11orf53-203ENST00000637637 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
C11orf53-203ENST00000637637 IDI1Q13907 227 aa23.31■■□□□ 1.32
C11orf53-203ENST00000637637 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
C11orf53-203ENST00000637637 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
C11orf53-203ENST00000637637 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
C11orf53-203ENST00000637637 E9PCH4 1651 aa23.28■■□□□ 1.32
C11orf53-203ENST00000637637 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
C11orf53-203ENST00000637637 PTPRTO14522 1441 aa23.25■■□□□ 1.31
C11orf53-203ENST00000637637 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
C11orf53-203ENST00000637637 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
C11orf53-203ENST00000637637 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
C11orf53-203ENST00000637637 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
C11orf53-203ENST00000637637 SYNMO15061 1565 aa23.23■■□□□ 1.31
C11orf53-203ENST00000637637 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
C11orf53-203ENST00000637637 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
C11orf53-203ENST00000637637 FOXD1Q16676 465 aa23.19■■□□□ 1.3
C11orf53-203ENST00000637637 TRPM2O94759 1503 aa23.17■■□□□ 1.3
C11orf53-203ENST00000637637 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
C11orf53-203ENST00000637637 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
C11orf53-203ENST00000637637 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
C11orf53-203ENST00000637637 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
C11orf53-203ENST00000637637 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
C11orf53-203ENST00000637637 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
C11orf53-203ENST00000637637 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
C11orf53-203ENST00000637637 KDM5AP29375 1690 aaKnown RBP23.15■■□□□ 1.3
C11orf53-203ENST00000637637 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.3
C11orf53-203ENST00000637637 ADGRB3O60242 1522 aa23.14■■□□□ 1.3
C11orf53-203ENST00000637637 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
C11orf53-203ENST00000637637 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
C11orf53-203ENST00000637637 SLIT1O75093 1534 aa23.1■■□□□ 1.29
C11orf53-203ENST00000637637 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
C11orf53-203ENST00000637637 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
C11orf53-203ENST00000637637 SCAF11Q99590 1463 aaKnown RBP23.07■■□□□ 1.28
C11orf53-203ENST00000637637 ANKRD30BQ9BXX2 1392 aa23.07■■□□□ 1.28
C11orf53-203ENST00000637637 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
C11orf53-203ENST00000637637 LTKP29376 864 aa23.06■■□□□ 1.28
C11orf53-203ENST00000637637 BCANQ96GW7 911 aa23.06■■□□□ 1.28
C11orf53-203ENST00000637637 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
C11orf53-203ENST00000637637 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
C11orf53-203ENST00000637637 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms