RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
CTSD-211ENST00000637387 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
CTSD-211ENST00000637387 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
CTSD-211ENST00000637387 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.21
CTSD-211ENST00000637387 DEPDC5O75140 1603 aa22.58■■□□□ 1.21
CTSD-211ENST00000637387 EIF2AK4Q9P2K8 1649 aaKnown RBP22.58■■□□□ 1.21
CTSD-211ENST00000637387 DIP2CQ9Y2E4 1556 aa22.56■■□□□ 1.2
CTSD-211ENST00000637387 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
CTSD-211ENST00000637387 IQGAP3Q86VI3 1631 aa22.55■■□□□ 1.2
CTSD-211ENST00000637387 MLECQ14165 292 aa22.54■■□□□ 1.2
CTSD-211ENST00000637387 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
CTSD-211ENST00000637387 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
CTSD-211ENST00000637387 FER1L4A9Z1Z3 1794 aa22.5■■□□□ 1.19
CTSD-211ENST00000637387 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
CTSD-211ENST00000637387 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
CTSD-211ENST00000637387 FAM135AQ9P2D6 1515 aa22.49■■□□□ 1.19
CTSD-211ENST00000637387 RNF17Q9BXT8 1623 aaKnown RBP22.48■■□□□ 1.19
CTSD-211ENST00000637387 AGLP35573 1532 aa22.48■■□□□ 1.19
CTSD-211ENST00000637387 MPHOSPH9Q99550 1183 aa22.46■■□□□ 1.19
CTSD-211ENST00000637387 PRDM15P57071 1507 aaPredicted RBP22.46■■□□□ 1.19
CTSD-211ENST00000637387 LMTK3Q96Q04 1460 aa22.46■■□□□ 1.19
CTSD-211ENST00000637387 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
CTSD-211ENST00000637387 A2MP01023 1474 aa22.46■■□□□ 1.19
CTSD-211ENST00000637387 DHX29Q7Z478 1369 aaKnown RBP22.44■■□□□ 1.18
CTSD-211ENST00000637387 NUP155O75694 1391 aa22.43■■□□□ 1.18
CTSD-211ENST00000637387 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.18
CTSD-211ENST00000637387 E9PCH4 1651 aa22.39■■□□□ 1.17
CTSD-211ENST00000637387 TET3O43151 1660 aa22.39■■□□□ 1.17
CTSD-211ENST00000637387 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
CTSD-211ENST00000637387 CEP152O94986 1710 aa22.38■■□□□ 1.17
CTSD-211ENST00000637387 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
CTSD-211ENST00000637387 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CTSD-211ENST00000637387 CEBPAP49715 358 aaPredicted RBP22.37■■□□□ 1.17
CTSD-211ENST00000637387 FOXD1Q16676 465 aa22.36■■□□□ 1.17
CTSD-211ENST00000637387 HSPA2P54652 639 aa22.32■■□□□ 1.16
CTSD-211ENST00000637387 PKD2Q13563 968 aa22.31■■□□□ 1.16
CTSD-211ENST00000637387 RPRD2Q5VT52 1461 aaKnown RBP22.31■■□□□ 1.16
CTSD-211ENST00000637387 LMTK2Q8IWU2 1503 aa22.3■■□□□ 1.16
CTSD-211ENST00000637387 SETD1BQ9UPS6 1966 aaKnown RBP22.3■■□□□ 1.16
CTSD-211ENST00000637387 SPHKAPQ2M3C7 1700 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 C3P01024 1663 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 PREX1Q8TCU6 1659 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 EFCAB6Q5THR3 1501 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 CNTLNQ9NXG0 1405 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 KIF3BO15066 747 aa22.29■■□□□ 1.16
CTSD-211ENST00000637387 ZC3H13Q5T200 1668 aaKnown RBP22.28■■□□□ 1.16
CTSD-211ENST00000637387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
CTSD-211ENST00000637387 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
CTSD-211ENST00000637387 ILDR1Q86SU0 546 aaPredicted RBP22.26■■□□□ 1.15
CTSD-211ENST00000637387 ESF1Q9H501 851 aaKnown RBP22.26■■□□□ 1.15
CTSD-211ENST00000637387 PLA2R1Q13018 1463 aa22.26■■□□□ 1.15
CTSD-211ENST00000637387 CAMSAP1Q5T5Y3 1602 aa22.26■■□□□ 1.15
CTSD-211ENST00000637387 ABCC3O15438 1527 aa22.24■■□□□ 1.15
CTSD-211ENST00000637387 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
CTSD-211ENST00000637387 UHRF1BP1Q6BDS2 1440 aa22.21■■□□□ 1.15
CTSD-211ENST00000637387 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
CTSD-211ENST00000637387 TRPM2O94759 1503 aa22.21■■□□□ 1.15
CTSD-211ENST00000637387 ZMYM3Q14202 1370 aa22.2■■□□□ 1.15
CTSD-211ENST00000637387 KANK1Q14678 1352 aa22.2■■□□□ 1.15
CTSD-211ENST00000637387 PPP6R1Q9UPN7 881 aa22.2■■□□□ 1.14
CTSD-211ENST00000637387 TONSLQ96HA7 1378 aa22.19■■□□□ 1.14
CTSD-211ENST00000637387 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
CTSD-211ENST00000637387 GGT6Q6P531 493 aa22.17■■□□□ 1.14
CTSD-211ENST00000637387 NPATQ14207 1427 aa22.17■■□□□ 1.14
CTSD-211ENST00000637387 PTPRTO14522 1441 aa22.16■■□□□ 1.14
CTSD-211ENST00000637387 CLTCQ00610 1675 aaKnown RBP22.15■■□□□ 1.14
CTSD-211ENST00000637387 CFAP65Q6ZU64 1925 aaKnown RBP22.13■■□□□ 1.13
CTSD-211ENST00000637387 STRCQ7RTU9 1775 aa22.13■■□□□ 1.13
CTSD-211ENST00000637387 CCDC144AA2RUR9 1427 aa22.11■■□□□ 1.13
CTSD-211ENST00000637387 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
CTSD-211ENST00000637387 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.13
CTSD-211ENST00000637387 PIK3C2BO00750 1634 aa22.07■■□□□ 1.12
CTSD-211ENST00000637387 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
CTSD-211ENST00000637387 KIF1BO60333 1816 aa22.07■■□□□ 1.12
CTSD-211ENST00000637387 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
CTSD-211ENST00000637387 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
CTSD-211ENST00000637387 SYNMO15061 1565 aa22.06■■□□□ 1.12
CTSD-211ENST00000637387 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
CTSD-211ENST00000637387 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
CTSD-211ENST00000637387 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
CTSD-211ENST00000637387 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
CTSD-211ENST00000637387 WASHC2CQ9Y4E1 1318 aa22.03■■□□□ 1.12
CTSD-211ENST00000637387 NOS1P29475 1434 aa22.03■■□□□ 1.12
CTSD-211ENST00000637387 MYO3AQ8NEV4 1616 aa22.01■■□□□ 1.11
CTSD-211ENST00000637387 ZNF142P52746 1687 aaPredicted RBP22■■□□□ 1.11
CTSD-211ENST00000637387 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
CTSD-211ENST00000637387 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
CTSD-211ENST00000637387 CERKQ8TCT0 537 aa21.97■■□□□ 1.11
CTSD-211ENST00000637387 FBXO31Q5XUX0 539 aaPredicted RBP21.96■■□□□ 1.11
CTSD-211ENST00000637387 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
CTSD-211ENST00000637387 TRPM1Q7Z4N2 1603 aa21.95■■□□□ 1.1
CTSD-211ENST00000637387 MYO5BQ9ULV0 1848 aa21.95■■□□□ 1.1
CTSD-211ENST00000637387 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.1
CTSD-211ENST00000637387 A2ML1A8K2U0 1454 aa21.94■■□□□ 1.1
CTSD-211ENST00000637387 ERVK-7P63135 1459 aa21.94■■□□□ 1.1
CTSD-211ENST00000637387 TNRQ92752 1358 aa21.93■■□□□ 1.1
CTSD-211ENST00000637387 PPLO60437 1756 aa21.92■■□□□ 1.1
CTSD-211ENST00000637387 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
CTSD-211ENST00000637387 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
CTSD-211ENST00000637387 ZNF316A6NFI3 1004 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms