RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 DNMT1P26358 1616 aaKnown RBP13.33□□□□□ -0.28
SMARCA2-260ENST00000637352 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
SMARCA2-260ENST00000637352 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
SMARCA2-260ENST00000637352 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
SMARCA2-260ENST00000637352 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
SMARCA2-260ENST00000637352 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
SMARCA2-260ENST00000637352 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
SMARCA2-260ENST00000637352 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
SMARCA2-260ENST00000637352 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
SMARCA2-260ENST00000637352 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
SMARCA2-260ENST00000637352 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
SMARCA2-260ENST00000637352 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
SMARCA2-260ENST00000637352 CPS1P31327 1500 aa13.27□□□□□ -0.29
SMARCA2-260ENST00000637352 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
SMARCA2-260ENST00000637352 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
SMARCA2-260ENST00000637352 PZPP20742 1482 aa13.25□□□□□ -0.29
SMARCA2-260ENST00000637352 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
SMARCA2-260ENST00000637352 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-260ENST00000637352 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
SMARCA2-260ENST00000637352 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
SMARCA2-260ENST00000637352 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
SMARCA2-260ENST00000637352 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
SMARCA2-260ENST00000637352 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
SMARCA2-260ENST00000637352 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
SMARCA2-260ENST00000637352 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
SMARCA2-260ENST00000637352 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
SMARCA2-260ENST00000637352 TSPY4P0CV99 314 aa13.21□□□□□ -0.29
SMARCA2-260ENST00000637352 TSPY10P0CW01 314 aa13.21□□□□□ -0.29
SMARCA2-260ENST00000637352 CEP162Q5TB80 1403 aa13.21□□□□□ -0.3
SMARCA2-260ENST00000637352 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
SMARCA2-260ENST00000637352 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
SMARCA2-260ENST00000637352 LRRC7Q96NW7 1537 aa13.18□□□□□ -0.3
SMARCA2-260ENST00000637352 MED14O60244 1454 aa13.18□□□□□ -0.3
SMARCA2-260ENST00000637352 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
SMARCA2-260ENST00000637352 RGS17Q9UGC6 210 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-260ENST00000637352 LTKP29376 864 aa13.16□□□□□ -0.3
SMARCA2-260ENST00000637352 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
SMARCA2-260ENST00000637352 IQGAP1P46940 1657 aa13.15□□□□□ -0.3
SMARCA2-260ENST00000637352 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
SMARCA2-260ENST00000637352 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-260ENST00000637352 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
SMARCA2-260ENST00000637352 ABCC3O15438 1527 aa13.13□□□□□ -0.31
SMARCA2-260ENST00000637352 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
SMARCA2-260ENST00000637352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA2-260ENST00000637352 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-260ENST00000637352 CFAP65Q6ZU64 1925 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-260ENST00000637352 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
SMARCA2-260ENST00000637352 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
SMARCA2-260ENST00000637352 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-260ENST00000637352 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
SMARCA2-260ENST00000637352 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-260ENST00000637352 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.32
SMARCA2-260ENST00000637352 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
SMARCA2-260ENST00000637352 SYNMO15061 1565 aa13.07□□□□□ -0.32
SMARCA2-260ENST00000637352 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
SMARCA2-260ENST00000637352 CEP152O94986 1710 aa13.07□□□□□ -0.32
SMARCA2-260ENST00000637352 ZC3H13Q5T200 1668 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-260ENST00000637352 UBR1Q8IWV7 1749 aa13.06□□□□□ -0.32
SMARCA2-260ENST00000637352 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
SMARCA2-260ENST00000637352 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
SMARCA2-260ENST00000637352 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
SMARCA2-260ENST00000637352 BCANQ96GW7 911 aa13.05□□□□□ -0.32
SMARCA2-260ENST00000637352 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
SMARCA2-260ENST00000637352 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
SMARCA2-260ENST00000637352 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
SMARCA2-260ENST00000637352 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
SMARCA2-260ENST00000637352 KCNA6P17658 529 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 IDI1Q13907 227 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 TMEM2Q9UHN6 1383 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 SLIT1O75093 1534 aa13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-260ENST00000637352 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
SMARCA2-260ENST00000637352 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-260ENST00000637352 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
SMARCA2-260ENST00000637352 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
SMARCA2-260ENST00000637352 ABCC5O15440 1437 aa12.98□□□□□ -0.33
SMARCA2-260ENST00000637352 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
SMARCA2-260ENST00000637352 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
SMARCA2-260ENST00000637352 KANK1Q14678 1352 aa12.97□□□□□ -0.33
SMARCA2-260ENST00000637352 ROBO1Q9Y6N7 1651 aa12.97□□□□□ -0.33
SMARCA2-260ENST00000637352 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
SMARCA2-260ENST00000637352 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
SMARCA2-260ENST00000637352 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-260ENST00000637352 EFCAB6Q5THR3 1501 aa12.95□□□□□ -0.34
SMARCA2-260ENST00000637352 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
SMARCA2-260ENST00000637352 SETD1AO15047 1707 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-260ENST00000637352 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
SMARCA2-260ENST00000637352 MSH6P52701 1360 aa12.94□□□□□ -0.34
SMARCA2-260ENST00000637352 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-260ENST00000637352 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-260ENST00000637352 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-260ENST00000637352 MEX3CQ5U5Q3 659 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-260ENST00000637352 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
SMARCA2-260ENST00000637352 DAPK1P53355 1430 aa12.93□□□□□ -0.34
SMARCA2-260ENST00000637352 TET3O43151 1660 aa12.92□□□□□ -0.34
SMARCA2-260ENST00000637352 JCADQ9P266 1359 aa12.92□□□□□ -0.34
SMARCA2-260ENST00000637352 APLP2Q06481 763 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms