RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 KDM5DQ9BY66 1539 aa30.73■■■□□ 2.51
CLN8-213ENST00000637156 A2MP01023 1474 aa30.73■■■□□ 2.51
CLN8-213ENST00000637156 YEATS2Q9ULM3 1422 aa30.71■■■□□ 2.51
CLN8-213ENST00000637156 UNC13BO14795 1591 aa30.69■■■□□ 2.5
CLN8-213ENST00000637156 ANKRD30BQ9BXX2 1392 aa30.69■■■□□ 2.5
CLN8-213ENST00000637156 ABCA6Q8N139 1617 aa30.67■■■□□ 2.5
CLN8-213ENST00000637156 ZMYM4Q5VZL5 1548 aa30.67■■■□□ 2.5
CLN8-213ENST00000637156 FAM135AQ9P2D6 1515 aa30.67■■■□□ 2.5
CLN8-213ENST00000637156 MAGI2Q86UL8 1455 aa30.67■■■□□ 2.5
CLN8-213ENST00000637156 DIP2CQ9Y2E4 1556 aa30.64■■■□□ 2.5
CLN8-213ENST00000637156 EIF2AK4Q9P2K8 1649 aaKnown RBP30.6■■■□□ 2.49
CLN8-213ENST00000637156 TIMELESSQ9UNS1 1208 aa30.59■■■□□ 2.49
CLN8-213ENST00000637156 IQGAP3Q86VI3 1631 aa30.58■■■□□ 2.49
CLN8-213ENST00000637156 DEPDC5O75140 1603 aa30.57■■■□□ 2.48
CLN8-213ENST00000637156 GGT6Q6P531 493 aa30.57■■■□□ 2.48
CLN8-213ENST00000637156 ATP10AO60312 1499 aa30.56■■■□□ 2.48
CLN8-213ENST00000637156 KANK1Q14678 1352 aa30.53■■■□□ 2.48
CLN8-213ENST00000637156 MROH1Q8NDA8 1641 aa30.52■■■□□ 2.48
CLN8-213ENST00000637156 VWDEQ8N2E2 1590 aa30.51■■■□□ 2.48
CLN8-213ENST00000637156 PRDM15P57071 1507 aaPredicted RBP30.5■■■□□ 2.47
CLN8-213ENST00000637156 TONSLQ96HA7 1378 aa30.47■■■□□ 2.47
CLN8-213ENST00000637156 RPRD2Q5VT52 1461 aaKnown RBP30.47■■■□□ 2.47
CLN8-213ENST00000637156 RNF17Q9BXT8 1623 aaKnown RBP30.47■■■□□ 2.47
CLN8-213ENST00000637156 BCORL1Q5H9F3 1711 aa30.46■■■□□ 2.47
CLN8-213ENST00000637156 PPP1R15AO75807 674 aaPredicted RBP30.45■■■□□ 2.47
CLN8-213ENST00000637156 PLA2R1Q13018 1463 aa30.45■■■□□ 2.46
CLN8-213ENST00000637156 WASHC2CQ9Y4E1 1318 aa30.43■■■□□ 2.46
CLN8-213ENST00000637156 REREQ9P2R6 1566 aa30.41■■■□□ 2.46
CLN8-213ENST00000637156 L3MBTL2Q969R5 705 aa30.4■■■□□ 2.46
CLN8-213ENST00000637156 ARHGEF40Q8TER5 1519 aa30.38■■■□□ 2.45
CLN8-213ENST00000637156 LMTK2Q8IWU2 1503 aa30.38■■■□□ 2.45
CLN8-213ENST00000637156 AGLP35573 1532 aa30.37■■■□□ 2.45
CLN8-213ENST00000637156 TET3O43151 1660 aa30.36■■■□□ 2.45
CLN8-213ENST00000637156 E9PCH4 1651 aa30.36■■■□□ 2.45
CLN8-213ENST00000637156 SIGLEC1Q9BZZ2 1709 aa30.33■■■□□ 2.45
CLN8-213ENST00000637156 PTPRTO14522 1441 aa30.32■■■□□ 2.44
CLN8-213ENST00000637156 CCDC144AA2RUR9 1427 aa30.32■■■□□ 2.44
CLN8-213ENST00000637156 ABCC3O15438 1527 aa30.31■■■□□ 2.44
CLN8-213ENST00000637156 PPP6R1Q9UPN7 881 aa30.29■■■□□ 2.44
CLN8-213ENST00000637156 EFCAB6Q5THR3 1501 aa30.29■■■□□ 2.44
CLN8-213ENST00000637156 MLECQ14165 292 aa30.29■■■□□ 2.44
CLN8-213ENST00000637156 CEP152O94986 1710 aa30.28■■■□□ 2.44
CLN8-213ENST00000637156 NPATQ14207 1427 aa30.27■■■□□ 2.44
CLN8-213ENST00000637156 ARID4BQ4LE39 1312 aaPredicted RBP30.23■■■□□ 2.43
CLN8-213ENST00000637156 TRPM2O94759 1503 aa30.21■■■□□ 2.43
CLN8-213ENST00000637156 RGL3Q3MIN7 710 aa30.2■■■□□ 2.42
CLN8-213ENST00000637156 ARHGAP31Q2M1Z3 1444 aa30.2■■■□□ 2.42
CLN8-213ENST00000637156 SPHKAPQ2M3C7 1700 aa30.17■■■□□ 2.42
CLN8-213ENST00000637156 NBPF8Q3BBV2 869 aa30.16■■■□□ 2.42
CLN8-213ENST00000637156 CAMSAP1Q5T5Y3 1602 aa30.16■■■□□ 2.42
CLN8-213ENST00000637156 ZC3H13Q5T200 1668 aaKnown RBP30.15■■■□□ 2.42
CLN8-213ENST00000637156 DCAF11Q8TEB1 546 aa30.14■■■□□ 2.42
CLN8-213ENST00000637156 NOS1P29475 1434 aa30.12■■■□□ 2.41
CLN8-213ENST00000637156 KDM2AQ9Y2K7 1162 aa30.12■■■□□ 2.41
CLN8-213ENST00000637156 SPATA31E1Q6ZUB1 1445 aa30.12■■■□□ 2.41
CLN8-213ENST00000637156 ZNF316A6NFI3 1004 aaPredicted RBP30.11■■■□□ 2.41
CLN8-213ENST00000637156 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
CLN8-213ENST00000637156 CNTLNQ9NXG0 1405 aa30.1■■■□□ 2.41
CLN8-213ENST00000637156 CLTCL1P53675 1640 aa30.1■■■□□ 2.41
CLN8-213ENST00000637156 UGGT1Q9NYU2 1555 aa30.09■■■□□ 2.41
CLN8-213ENST00000637156 CFAP65Q6ZU64 1925 aaKnown RBP30.09■■■□□ 2.41
CLN8-213ENST00000637156 ESF1Q9H501 851 aaKnown RBP30.08■■■□□ 2.41
CLN8-213ENST00000637156 ZMYM3Q14202 1370 aa30.05■■■□□ 2.4
CLN8-213ENST00000637156 CLTCQ00610 1675 aaKnown RBP30.04■■■□□ 2.4
CLN8-213ENST00000637156 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
CLN8-213ENST00000637156 IDI1Q13907 227 aa30.02■■■□□ 2.4
CLN8-213ENST00000637156 UHRF1BP1Q6BDS2 1440 aa30.02■■■□□ 2.4
CLN8-213ENST00000637156 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.39
CLN8-213ENST00000637156 SYNMO15061 1565 aa29.99■■■□□ 2.39
CLN8-213ENST00000637156 CHGAP10645 457 aaKnown RBP29.97■■■□□ 2.39
CLN8-213ENST00000637156 ERVK-7P63135 1459 aa29.96■■■□□ 2.39
CLN8-213ENST00000637156 NEURL4Q96JN8 1562 aa29.95■■■□□ 2.38
CLN8-213ENST00000637156 PREX1Q8TCU6 1659 aa29.94■■■□□ 2.38
CLN8-213ENST00000637156 STAC3Q96MF2 364 aa29.93■■■□□ 2.38
CLN8-213ENST00000637156 HIRIP3Q9BW71 556 aaPredicted RBP29.92■■■□□ 2.38
CLN8-213ENST00000637156 PRAG1Q86YV5 1406 aa29.92■■■□□ 2.38
CLN8-213ENST00000637156 PIK3C2BO00750 1634 aa29.92■■■□□ 2.38
CLN8-213ENST00000637156 KIF1BO60333 1816 aa29.89■■■□□ 2.38
CLN8-213ENST00000637156 CEBPAP49715 358 aaPredicted RBP29.89■■■□□ 2.37
CLN8-213ENST00000637156 SPATA31D1Q6ZQQ2 1576 aa29.89■■■□□ 2.37
CLN8-213ENST00000637156 ADGRB3O60242 1522 aa29.88■■■□□ 2.37
CLN8-213ENST00000637156 EIF4G2P78344 907 aaKnown RBP eCLIP29.84■■■□□ 2.37
CLN8-213ENST00000637156 MROH2AA6NES4 1674 aa29.84■■■□□ 2.37
CLN8-213ENST00000637156 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
CLN8-213ENST00000637156 NBPF1Q3BBV0 1214 aa29.83■■■□□ 2.37
CLN8-213ENST00000637156 RPGRIP1LQ68CZ1 1315 aa29.83■■■□□ 2.37
CLN8-213ENST00000637156 RALGAPBQ86X10 1494 aa29.82■■■□□ 2.36
CLN8-213ENST00000637156 ADGRF5Q8IZF2 1346 aa29.82■■■□□ 2.36
CLN8-213ENST00000637156 CARD11Q9BXL7 1154 aa29.79■■■□□ 2.36
CLN8-213ENST00000637156 ROCK2O75116 1388 aaKnown RBP29.77■■■□□ 2.36
CLN8-213ENST00000637156 TNRQ92752 1358 aa29.77■■■□□ 2.36
CLN8-213ENST00000637156 STAG3Q9UJ98 1225 aa29.76■■■□□ 2.36
CLN8-213ENST00000637156 TMEM131LA2VDJ0 1609 aa29.76■■■□□ 2.35
CLN8-213ENST00000637156 PLPPR3Q6T4P5 718 aa29.75■■■□□ 2.35
CLN8-213ENST00000637156 MYOM2P54296 1465 aa29.75■■■□□ 2.35
CLN8-213ENST00000637156 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
CLN8-213ENST00000637156 NUTM2DQ5VT03 806 aaPredicted RBP29.74■■■□□ 2.35
CLN8-213ENST00000637156 TRPM1Q7Z4N2 1603 aa29.73■■■□□ 2.35
CLN8-213ENST00000637156 MADDQ8WXG6 1647 aa29.73■■■□□ 2.35
CLN8-213ENST00000637156 VGFO15240 615 aaPredicted RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms