RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 TOM1O60784 492 aa11.77□□□□□ -0.53
SYNGAP1-219ENST00000637052 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-219ENST00000637052 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-219ENST00000637052 ALKQ9UM73 1620 aa11.76□□□□□ -0.53
SYNGAP1-219ENST00000637052 KIF3BO15066 747 aa11.76□□□□□ -0.53
SYNGAP1-219ENST00000637052 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-219ENST00000637052 TNRQ92752 1358 aa11.76□□□□□ -0.53
SYNGAP1-219ENST00000637052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYNGAP1-219ENST00000637052 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
SYNGAP1-219ENST00000637052 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
SYNGAP1-219ENST00000637052 CPS1P31327 1500 aa11.74□□□□□ -0.53
SYNGAP1-219ENST00000637052 VWDEQ8N2E2 1590 aa11.74□□□□□ -0.53
SYNGAP1-219ENST00000637052 ANKLE2Q86XL3 938 aa11.73□□□□□ -0.53
SYNGAP1-219ENST00000637052 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
SYNGAP1-219ENST00000637052 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
SYNGAP1-219ENST00000637052 PZPP20742 1482 aa11.71□□□□□ -0.53
SYNGAP1-219ENST00000637052 WASHC2CQ9Y4E1 1318 aa11.71□□□□□ -0.53
SYNGAP1-219ENST00000637052 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-219ENST00000637052 MIA2Q96PC5 1412 aa11.7□□□□□ -0.54
SYNGAP1-219ENST00000637052 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-219ENST00000637052 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-219ENST00000637052 CFAP65Q6ZU64 1925 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-219ENST00000637052 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
SYNGAP1-219ENST00000637052 UGGT1Q9NYU2 1555 aa11.68□□□□□ -0.54
SYNGAP1-219ENST00000637052 MED14O60244 1454 aa11.68□□□□□ -0.54
SYNGAP1-219ENST00000637052 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-219ENST00000637052 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
SYNGAP1-219ENST00000637052 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
SYNGAP1-219ENST00000637052 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
SYNGAP1-219ENST00000637052 DEPDC5O75140 1603 aa11.66□□□□□ -0.54
SYNGAP1-219ENST00000637052 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.54
SYNGAP1-219ENST00000637052 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
SYNGAP1-219ENST00000637052 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
SYNGAP1-219ENST00000637052 CAMSAP2Q08AD1 1489 aa11.65□□□□□ -0.54
SYNGAP1-219ENST00000637052 NLRP1Q9C000 1473 aa11.65□□□□□ -0.54
SYNGAP1-219ENST00000637052 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
SYNGAP1-219ENST00000637052 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
SYNGAP1-219ENST00000637052 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
SYNGAP1-219ENST00000637052 LTKP29376 864 aa11.62□□□□□ -0.55
SYNGAP1-219ENST00000637052 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
SYNGAP1-219ENST00000637052 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
SYNGAP1-219ENST00000637052 ABCC3O15438 1527 aa11.61□□□□□ -0.55
SYNGAP1-219ENST00000637052 XIRP1Q702N8 1843 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-219ENST00000637052 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
SYNGAP1-219ENST00000637052 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-219ENST00000637052 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
SYNGAP1-219ENST00000637052 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
SYNGAP1-219ENST00000637052 CEP152O94986 1710 aa11.59□□□□□ -0.55
SYNGAP1-219ENST00000637052 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
SYNGAP1-219ENST00000637052 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.55
SYNGAP1-219ENST00000637052 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
SYNGAP1-219ENST00000637052 SYNMO15061 1565 aa11.58□□□□□ -0.56
SYNGAP1-219ENST00000637052 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
SYNGAP1-219ENST00000637052 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
SYNGAP1-219ENST00000637052 ARHGAP23Q9P227 1491 aa11.55□□□□□ -0.56
SYNGAP1-219ENST00000637052 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
SYNGAP1-219ENST00000637052 KANK4Q5T7N3 995 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-219ENST00000637052 SLIT1O75093 1534 aa11.53□□□□□ -0.56
SYNGAP1-219ENST00000637052 EIF2AK4Q9P2K8 1649 aaKnown RBP11.53□□□□□ -0.56
SYNGAP1-219ENST00000637052 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.56
SYNGAP1-219ENST00000637052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.52□□□□□ -0.57
SYNGAP1-219ENST00000637052 PIK3C2BO00750 1634 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 EID1Q9Y6B2 187 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 LRRC9Q6ZRR7 1453 aa11.51□□□□□ -0.57
SYNGAP1-219ENST00000637052 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 KCNA6P17658 529 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 IDI1Q13907 227 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 PROSER2Q86WR7 435 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 ARHGAP31Q2M1Z3 1444 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 DUOX2Q9NRD8 1548 aa11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-219ENST00000637052 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
SYNGAP1-219ENST00000637052 TET3O43151 1660 aa11.47□□□□□ -0.57
SYNGAP1-219ENST00000637052 MAP3K1Q13233 1512 aa11.47□□□□□ -0.57
SYNGAP1-219ENST00000637052 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
SYNGAP1-219ENST00000637052 ABCC5O15440 1437 aa11.46□□□□□ -0.57
SYNGAP1-219ENST00000637052 KIF15Q9NS87 1388 aa11.46□□□□□ -0.57
SYNGAP1-219ENST00000637052 PRDM15P57071 1507 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-219ENST00000637052 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
SYNGAP1-219ENST00000637052 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SYNGAP1-219ENST00000637052 EFCAB6Q5THR3 1501 aa11.44□□□□□ -0.58
SYNGAP1-219ENST00000637052 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
SYNGAP1-219ENST00000637052 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
SYNGAP1-219ENST00000637052 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
SYNGAP1-219ENST00000637052 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
SYNGAP1-219ENST00000637052 BCANQ96GW7 911 aa11.42□□□□□ -0.58
SYNGAP1-219ENST00000637052 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
SYNGAP1-219ENST00000637052 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-219ENST00000637052 MYO5BQ9ULV0 1848 aa11.4□□□□□ -0.58
SYNGAP1-219ENST00000637052 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.58
SYNGAP1-219ENST00000637052 NOS1P29475 1434 aa11.4□□□□□ -0.58
SYNGAP1-219ENST00000637052 NWD1Q149M9 1564 aa11.4□□□□□ -0.58
SYNGAP1-219ENST00000637052 MSH6P52701 1360 aa11.4□□□□□ -0.59
SYNGAP1-219ENST00000637052 KANK1Q14678 1352 aa11.4□□□□□ -0.59
SYNGAP1-219ENST00000637052 JCADQ9P266 1359 aa11.4□□□□□ -0.59
SYNGAP1-219ENST00000637052 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms