RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 PZPP20742 1482 aa15.83■□□□□ 0.13
CLN5-213ENST00000636681 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.13
CLN5-213ENST00000636681 BCORL1Q5H9F3 1711 aa15.83■□□□□ 0.13
CLN5-213ENST00000636681 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.12
CLN5-213ENST00000636681 FOXD1Q16676 465 aa15.82■□□□□ 0.12
CLN5-213ENST00000636681 GGT6Q6P531 493 aa15.82■□□□□ 0.12
CLN5-213ENST00000636681 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
CLN5-213ENST00000636681 REREQ9P2R6 1566 aa15.82■□□□□ 0.12
CLN5-213ENST00000636681 NUP155O75694 1391 aa15.82■□□□□ 0.12
CLN5-213ENST00000636681 MLECQ14165 292 aa15.82■□□□□ 0.12
CLN5-213ENST00000636681 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
CLN5-213ENST00000636681 HRCP23327 699 aa15.8■□□□□ 0.12
CLN5-213ENST00000636681 PRDM15P57071 1507 aaPredicted RBP15.79■□□□□ 0.12
CLN5-213ENST00000636681 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
CLN5-213ENST00000636681 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
CLN5-213ENST00000636681 ARID4BQ4LE39 1312 aaPredicted RBP15.78■□□□□ 0.12
CLN5-213ENST00000636681 AGLP35573 1532 aa15.78■□□□□ 0.12
CLN5-213ENST00000636681 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
CLN5-213ENST00000636681 VWDEQ8N2E2 1590 aa15.78■□□□□ 0.12
CLN5-213ENST00000636681 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.11
CLN5-213ENST00000636681 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
CLN5-213ENST00000636681 E9PCH4 1651 aa15.75■□□□□ 0.11
CLN5-213ENST00000636681 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
CLN5-213ENST00000636681 PKD2Q13563 968 aa15.73■□□□□ 0.11
CLN5-213ENST00000636681 ABCC3O15438 1527 aa15.73■□□□□ 0.11
CLN5-213ENST00000636681 TET3O43151 1660 aa15.73■□□□□ 0.11
CLN5-213ENST00000636681 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
CLN5-213ENST00000636681 KANK1Q14678 1352 aa15.7■□□□□ 0.1
CLN5-213ENST00000636681 WASHC2CQ9Y4E1 1318 aa15.7■□□□□ 0.1
CLN5-213ENST00000636681 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
CLN5-213ENST00000636681 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
CLN5-213ENST00000636681 EFCAB6Q5THR3 1501 aa15.69■□□□□ 0.1
CLN5-213ENST00000636681 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
CLN5-213ENST00000636681 MADDQ8WXG6 1647 aa15.67■□□□□ 0.1
CLN5-213ENST00000636681 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
CLN5-213ENST00000636681 PLA2R1Q13018 1463 aa15.66■□□□□ 0.1
CLN5-213ENST00000636681 SPHKAPQ2M3C7 1700 aa15.66■□□□□ 0.1
CLN5-213ENST00000636681 RIMS1Q86UR5 1692 aaKnown RBP15.65■□□□□ 0.1
CLN5-213ENST00000636681 NPATQ14207 1427 aa15.65■□□□□ 0.1
CLN5-213ENST00000636681 ADAMTSL3P82987 1691 aa15.65■□□□□ 0.1
CLN5-213ENST00000636681 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.1
CLN5-213ENST00000636681 UGGT1Q9NYU2 1555 aa15.64■□□□□ 0.09
CLN5-213ENST00000636681 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
CLN5-213ENST00000636681 FBXO31Q5XUX0 539 aaPredicted RBP15.64■□□□□ 0.09
CLN5-213ENST00000636681 CEBPAP49715 358 aaPredicted RBP15.63■□□□□ 0.09
CLN5-213ENST00000636681 NEUROD1Q13562 356 aa15.63■□□□□ 0.09
CLN5-213ENST00000636681 C3P01024 1663 aa15.63■□□□□ 0.09
CLN5-213ENST00000636681 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
CLN5-213ENST00000636681 SYNMO15061 1565 aa15.6■□□□□ 0.09
CLN5-213ENST00000636681 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
CLN5-213ENST00000636681 MROH2AA6NES4 1674 aa15.59■□□□□ 0.09
CLN5-213ENST00000636681 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
CLN5-213ENST00000636681 ZMYM3Q14202 1370 aa15.59■□□□□ 0.09
CLN5-213ENST00000636681 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
CLN5-213ENST00000636681 MYO5BQ9ULV0 1848 aa15.57■□□□□ 0.08
CLN5-213ENST00000636681 PTPRTO14522 1441 aa15.57■□□□□ 0.08
CLN5-213ENST00000636681 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
CLN5-213ENST00000636681 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
CLN5-213ENST00000636681 TRPM2O94759 1503 aa15.56■□□□□ 0.08
CLN5-213ENST00000636681 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
CLN5-213ENST00000636681 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
CLN5-213ENST00000636681 NOS1P29475 1434 aa15.55■□□□□ 0.08
CLN5-213ENST00000636681 KDM4FA0A1W2PPD8 638 aa15.53■□□□□ 0.08
CLN5-213ENST00000636681 CNTLNQ9NXG0 1405 aa15.53■□□□□ 0.08
CLN5-213ENST00000636681 PIK3C2BO00750 1634 aa15.53■□□□□ 0.08
CLN5-213ENST00000636681 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
CLN5-213ENST00000636681 CLSPNQ9HAW4 1339 aa15.52■□□□□ 0.08
CLN5-213ENST00000636681 KIF1BO60333 1816 aa15.52■□□□□ 0.08
CLN5-213ENST00000636681 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
CLN5-213ENST00000636681 IDI1Q13907 227 aa15.49■□□□□ 0.07
CLN5-213ENST00000636681 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
CLN5-213ENST00000636681 PTPRMP28827 1452 aa15.49■□□□□ 0.07
CLN5-213ENST00000636681 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
CLN5-213ENST00000636681 TNRQ92752 1358 aa15.46■□□□□ 0.07
CLN5-213ENST00000636681 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.07
CLN5-213ENST00000636681 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.06
CLN5-213ENST00000636681 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
CLN5-213ENST00000636681 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
CLN5-213ENST00000636681 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
CLN5-213ENST00000636681 ADGRB3O60242 1522 aa15.43■□□□□ 0.06
CLN5-213ENST00000636681 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
CLN5-213ENST00000636681 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
CLN5-213ENST00000636681 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
CLN5-213ENST00000636681 NUTM2DQ5VT03 806 aaPredicted RBP15.42■□□□□ 0.06
CLN5-213ENST00000636681 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
CLN5-213ENST00000636681 SETD1BQ9UPS6 1966 aaKnown RBP15.41■□□□□ 0.06
CLN5-213ENST00000636681 PPLO60437 1756 aa15.41■□□□□ 0.06
CLN5-213ENST00000636681 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
CLN5-213ENST00000636681 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
CLN5-213ENST00000636681 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
CLN5-213ENST00000636681 ZNF326Q5BKZ1 582 aaKnown RBP15.39■□□□□ 0.05
CLN5-213ENST00000636681 NBPF8Q3BBV2 869 aa15.38■□□□□ 0.05
CLN5-213ENST00000636681 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
CLN5-213ENST00000636681 CEP170BQ9Y4F5 1589 aaPredicted RBP15.37■□□□□ 0.05
CLN5-213ENST00000636681 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
CLN5-213ENST00000636681 STAG3Q9UJ98 1225 aa15.36■□□□□ 0.05
CLN5-213ENST00000636681 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
CLN5-213ENST00000636681 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
CLN5-213ENST00000636681 NLRP1Q9C000 1473 aa15.35■□□□□ 0.05
CLN5-213ENST00000636681 NEURL4Q96JN8 1562 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms