RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
CLN6-211ENST00000635754 GGT6Q6P531 493 aa23.55■■□□□ 1.36
CLN6-211ENST00000635754 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
CLN6-211ENST00000635754 RNF17Q9BXT8 1623 aaKnown RBP23.55■■□□□ 1.36
CLN6-211ENST00000635754 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
CLN6-211ENST00000635754 MROH2AA6NES4 1674 aa23.52■■□□□ 1.36
CLN6-211ENST00000635754 CLTCQ00610 1675 aaKnown RBP23.52■■□□□ 1.36
CLN6-211ENST00000635754 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
CLN6-211ENST00000635754 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
CLN6-211ENST00000635754 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
CLN6-211ENST00000635754 C3P01024 1663 aa23.48■■□□□ 1.35
CLN6-211ENST00000635754 ANKRD50Q9ULJ7 1429 aa23.47■■□□□ 1.35
CLN6-211ENST00000635754 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
CLN6-211ENST00000635754 MROH1Q8NDA8 1641 aa23.47■■□□□ 1.35
CLN6-211ENST00000635754 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
CLN6-211ENST00000635754 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
CLN6-211ENST00000635754 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
CLN6-211ENST00000635754 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
CLN6-211ENST00000635754 GCC2Q8IWJ2 1684 aa23.42■■□□□ 1.34
CLN6-211ENST00000635754 CEP152O94986 1710 aa23.4■■□□□ 1.34
CLN6-211ENST00000635754 ABCC3O15438 1527 aa23.4■■□□□ 1.34
CLN6-211ENST00000635754 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
CLN6-211ENST00000635754 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.33
CLN6-211ENST00000635754 KANK1Q14678 1352 aa23.38■■□□□ 1.33
CLN6-211ENST00000635754 UNC13BO14795 1591 aa23.37■■□□□ 1.33
CLN6-211ENST00000635754 CAMSAP1Q5T5Y3 1602 aa23.36■■□□□ 1.33
CLN6-211ENST00000635754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.36■■□□□ 1.33
CLN6-211ENST00000635754 NAIPQ13075 1403 aa23.35■■□□□ 1.33
CLN6-211ENST00000635754 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
CLN6-211ENST00000635754 HFM1A2PYH4 1435 aa23.34■■□□□ 1.33
CLN6-211ENST00000635754 PREX1Q8TCU6 1659 aa23.34■■□□□ 1.33
CLN6-211ENST00000635754 NPATQ14207 1427 aa23.33■■□□□ 1.32
CLN6-211ENST00000635754 PZPP20742 1482 aa23.33■■□□□ 1.32
CLN6-211ENST00000635754 SETD1BQ9UPS6 1966 aaKnown RBP23.32■■□□□ 1.32
CLN6-211ENST00000635754 LMTK2Q8IWU2 1503 aa23.3■■□□□ 1.32
CLN6-211ENST00000635754 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
CLN6-211ENST00000635754 TET3O43151 1660 aa23.26■■□□□ 1.31
CLN6-211ENST00000635754 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
CLN6-211ENST00000635754 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
CLN6-211ENST00000635754 ARHGAP31Q2M1Z3 1444 aa23.26■■□□□ 1.31
CLN6-211ENST00000635754 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
CLN6-211ENST00000635754 MYO3AQ8NEV4 1616 aa23.24■■□□□ 1.31
CLN6-211ENST00000635754 NUP155O75694 1391 aa23.23■■□□□ 1.31
CLN6-211ENST00000635754 CFAP65Q6ZU64 1925 aaKnown RBP23.22■■□□□ 1.31
CLN6-211ENST00000635754 SPATA31D1Q6ZQQ2 1576 aa23.21■■□□□ 1.31
CLN6-211ENST00000635754 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
CLN6-211ENST00000635754 FBXO31Q5XUX0 539 aaPredicted RBP23.21■■□□□ 1.31
CLN6-211ENST00000635754 TNRQ92752 1358 aa23.21■■□□□ 1.31
CLN6-211ENST00000635754 ZNF142P52746 1687 aaPredicted RBP23.2■■□□□ 1.3
CLN6-211ENST00000635754 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
CLN6-211ENST00000635754 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
CLN6-211ENST00000635754 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
CLN6-211ENST00000635754 E9PCH4 1651 aa23.16■■□□□ 1.3
CLN6-211ENST00000635754 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
CLN6-211ENST00000635754 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
CLN6-211ENST00000635754 A2ML1A8K2U0 1454 aa23.13■■□□□ 1.29
CLN6-211ENST00000635754 HSPA2P54652 639 aa23.1■■□□□ 1.29
CLN6-211ENST00000635754 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
CLN6-211ENST00000635754 NOS1P29475 1434 aa23.1■■□□□ 1.29
CLN6-211ENST00000635754 SYNMO15061 1565 aa23.09■■□□□ 1.29
CLN6-211ENST00000635754 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
CLN6-211ENST00000635754 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
CLN6-211ENST00000635754 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
CLN6-211ENST00000635754 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
CLN6-211ENST00000635754 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
CLN6-211ENST00000635754 UBR1Q8IWV7 1749 aa23.03■■□□□ 1.28
CLN6-211ENST00000635754 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
CLN6-211ENST00000635754 KDM5AP29375 1690 aaKnown RBP23.01■■□□□ 1.27
CLN6-211ENST00000635754 PLA2R1Q13018 1463 aa23■■□□□ 1.27
CLN6-211ENST00000635754 STRCQ7RTU9 1775 aa23■■□□□ 1.27
CLN6-211ENST00000635754 PKD2Q13563 968 aa22.99■■□□□ 1.27
CLN6-211ENST00000635754 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
CLN6-211ENST00000635754 HRCP23327 699 aa22.98■■□□□ 1.27
CLN6-211ENST00000635754 THEMISQ8N1K5 641 aaPredicted RBP22.98■■□□□ 1.27
CLN6-211ENST00000635754 ADGRB3O60242 1522 aa22.97■■□□□ 1.27
CLN6-211ENST00000635754 PTPRTO14522 1441 aa22.97■■□□□ 1.27
CLN6-211ENST00000635754 IDI1Q13907 227 aa22.97■■□□□ 1.27
CLN6-211ENST00000635754 POLR1AO95602 1720 aaPredicted RBP22.96■■□□□ 1.27
CLN6-211ENST00000635754 MPHOSPH9Q99550 1183 aa22.96■■□□□ 1.27
CLN6-211ENST00000635754 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
CLN6-211ENST00000635754 TRPM2O94759 1503 aa22.96■■□□□ 1.27
CLN6-211ENST00000635754 MYO5BQ9ULV0 1848 aa22.92■■□□□ 1.26
CLN6-211ENST00000635754 TMEM131LA2VDJ0 1609 aa22.91■■□□□ 1.26
CLN6-211ENST00000635754 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
CLN6-211ENST00000635754 SLIT1O75093 1534 aa22.9■■□□□ 1.26
CLN6-211ENST00000635754 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.25
CLN6-211ENST00000635754 ANKLE2Q86XL3 938 aa22.88■■□□□ 1.25
CLN6-211ENST00000635754 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
CLN6-211ENST00000635754 NCKAP5LQ9HCH0 1330 aa22.88■■□□□ 1.25
CLN6-211ENST00000635754 KIF1BO60333 1816 aa22.87■■□□□ 1.25
CLN6-211ENST00000635754 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
CLN6-211ENST00000635754 NEURL4Q96JN8 1562 aa22.86■■□□□ 1.25
CLN6-211ENST00000635754 TMEM2Q9UHN6 1383 aa22.86■■□□□ 1.25
CLN6-211ENST00000635754 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
CLN6-211ENST00000635754 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
CLN6-211ENST00000635754 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
CLN6-211ENST00000635754 MED14O60244 1454 aa22.82■■□□□ 1.24
CLN6-211ENST00000635754 IQGAP1P46940 1657 aa22.82■■□□□ 1.24
CLN6-211ENST00000635754 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
CLN6-211ENST00000635754 NPHP4O75161 1426 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms