RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.11■■■□□ 2.25
CLN8-208ENST00000635751 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
CLN8-208ENST00000635751 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
CLN8-208ENST00000635751 BCORL1Q5H9F3 1711 aa29.1■■■□□ 2.25
CLN8-208ENST00000635751 SIGLEC1Q9BZZ2 1709 aa29.1■■■□□ 2.25
CLN8-208ENST00000635751 DEPDC5O75140 1603 aa29.1■■■□□ 2.25
CLN8-208ENST00000635751 NUP155O75694 1391 aa29.09■■■□□ 2.25
CLN8-208ENST00000635751 RNF17Q9BXT8 1623 aaKnown RBP29.05■■■□□ 2.24
CLN8-208ENST00000635751 MPHOSPH9Q99550 1183 aa29.05■■■□□ 2.24
CLN8-208ENST00000635751 PZPP20742 1482 aa29.05■■■□□ 2.24
CLN8-208ENST00000635751 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
CLN8-208ENST00000635751 DIEXFQ68CQ4 756 aaKnown RBP29.04■■■□□ 2.24
CLN8-208ENST00000635751 MROH1Q8NDA8 1641 aa29.04■■■□□ 2.24
CLN8-208ENST00000635751 ZNF316A6NFI3 1004 aaPredicted RBP29.03■■■□□ 2.24
CLN8-208ENST00000635751 GGT6Q6P531 493 aa29.03■■■□□ 2.24
CLN8-208ENST00000635751 SLC4A1APQ9BWU0 796 aaKnown RBP29.02■■■□□ 2.24
CLN8-208ENST00000635751 IQGAP3Q86VI3 1631 aa29.02■■■□□ 2.24
CLN8-208ENST00000635751 AGLP35573 1532 aa29.01■■■□□ 2.23
CLN8-208ENST00000635751 PRDM15P57071 1507 aaPredicted RBP29■■■□□ 2.23
CLN8-208ENST00000635751 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
CLN8-208ENST00000635751 KANK1Q14678 1352 aa28.97■■■□□ 2.23
CLN8-208ENST00000635751 VWDEQ8N2E2 1590 aa28.96■■■□□ 2.23
CLN8-208ENST00000635751 CEP152O94986 1710 aa28.95■■■□□ 2.22
CLN8-208ENST00000635751 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.22
CLN8-208ENST00000635751 FOXD1Q16676 465 aa28.93■■■□□ 2.22
CLN8-208ENST00000635751 PKD2Q13563 968 aa28.92■■■□□ 2.22
CLN8-208ENST00000635751 MLECQ14165 292 aa28.92■■■□□ 2.22
CLN8-208ENST00000635751 TET3O43151 1660 aa28.88■■■□□ 2.21
CLN8-208ENST00000635751 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
CLN8-208ENST00000635751 E9PCH4 1651 aa28.85■■■□□ 2.21
CLN8-208ENST00000635751 ABCC3O15438 1527 aa28.85■■■□□ 2.21
CLN8-208ENST00000635751 ZC3H13Q5T200 1668 aaKnown RBP28.84■■■□□ 2.21
CLN8-208ENST00000635751 CFAP65Q6ZU64 1925 aaKnown RBP28.84■■■□□ 2.21
CLN8-208ENST00000635751 LMTK2Q8IWU2 1503 aa28.84■■■□□ 2.21
CLN8-208ENST00000635751 PPP6R1Q9UPN7 881 aa28.81■■■□□ 2.2
CLN8-208ENST00000635751 CAMSAP1Q5T5Y3 1602 aa28.81■■■□□ 2.2
CLN8-208ENST00000635751 CLTCQ00610 1675 aaKnown RBP28.81■■■□□ 2.2
CLN8-208ENST00000635751 EFCAB6Q5THR3 1501 aa28.79■■■□□ 2.2
CLN8-208ENST00000635751 ANKRD30BQ9BXX2 1392 aa28.78■■■□□ 2.2
CLN8-208ENST00000635751 SIN3AQ96ST3 1273 aa28.77■■■□□ 2.2
CLN8-208ENST00000635751 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
CLN8-208ENST00000635751 NEUROD1Q13562 356 aa28.72■■■□□ 2.19
CLN8-208ENST00000635751 SPHKAPQ2M3C7 1700 aa28.72■■■□□ 2.19
CLN8-208ENST00000635751 NPATQ14207 1427 aa28.71■■■□□ 2.19
CLN8-208ENST00000635751 FER1L4A9Z1Z3 1794 aa28.71■■■□□ 2.19
CLN8-208ENST00000635751 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
CLN8-208ENST00000635751 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
CLN8-208ENST00000635751 ARHGAP31Q2M1Z3 1444 aa28.67■■■□□ 2.18
CLN8-208ENST00000635751 PTPRTO14522 1441 aa28.64■■■□□ 2.18
CLN8-208ENST00000635751 MROH2AA6NES4 1674 aa28.64■■■□□ 2.17
CLN8-208ENST00000635751 CNTLNQ9NXG0 1405 aa28.63■■■□□ 2.17
CLN8-208ENST00000635751 ZMYM3Q14202 1370 aa28.63■■■□□ 2.17
CLN8-208ENST00000635751 PREX1Q8TCU6 1659 aa28.63■■■□□ 2.17
CLN8-208ENST00000635751 ADAMTSL3P82987 1691 aa28.62■■■□□ 2.17
CLN8-208ENST00000635751 TRPM2O94759 1503 aa28.62■■■□□ 2.17
CLN8-208ENST00000635751 MADDQ8WXG6 1647 aa28.61■■■□□ 2.17
CLN8-208ENST00000635751 CCDC144AA2RUR9 1427 aa28.6■■■□□ 2.17
CLN8-208ENST00000635751 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
CLN8-208ENST00000635751 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.17
CLN8-208ENST00000635751 NOS1P29475 1434 aa28.57■■■□□ 2.16
CLN8-208ENST00000635751 CLTCL1P53675 1640 aa28.56■■■□□ 2.16
CLN8-208ENST00000635751 C3P01024 1663 aa28.56■■■□□ 2.16
CLN8-208ENST00000635751 UGGT1Q9NYU2 1555 aa28.55■■■□□ 2.16
CLN8-208ENST00000635751 SYNMO15061 1565 aa28.54■■■□□ 2.16
CLN8-208ENST00000635751 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
CLN8-208ENST00000635751 CEBPAP49715 358 aaPredicted RBP28.53■■■□□ 2.16
CLN8-208ENST00000635751 KIF1BO60333 1816 aa28.51■■■□□ 2.15
CLN8-208ENST00000635751 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
CLN8-208ENST00000635751 SPATA31D1Q6ZQQ2 1576 aa28.5■■■□□ 2.15
CLN8-208ENST00000635751 TONSLQ96HA7 1378 aa28.5■■■□□ 2.15
CLN8-208ENST00000635751 PLPPR3Q6T4P5 718 aa28.5■■■□□ 2.15
CLN8-208ENST00000635751 PIK3C2BO00750 1634 aa28.48■■■□□ 2.15
CLN8-208ENST00000635751 TIMELESSQ9UNS1 1208 aa28.47■■■□□ 2.15
CLN8-208ENST00000635751 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
CLN8-208ENST00000635751 IDI1Q13907 227 aa28.43■■■□□ 2.14
CLN8-208ENST00000635751 L3MBTL2Q969R5 705 aa28.43■■■□□ 2.14
CLN8-208ENST00000635751 RGL3Q3MIN7 710 aa28.43■■■□□ 2.14
CLN8-208ENST00000635751 MIER1Q8N108 512 aa28.43■■■□□ 2.14
CLN8-208ENST00000635751 SLC52A1Q9NWF4 448 aa28.43■■■□□ 2.14
CLN8-208ENST00000635751 SPATA31E1Q6ZUB1 1445 aa28.4■■■□□ 2.14
CLN8-208ENST00000635751 TNRQ92752 1358 aa28.39■■■□□ 2.14
CLN8-208ENST00000635751 CHGAP10645 457 aaKnown RBP28.39■■■□□ 2.14
CLN8-208ENST00000635751 MYO5BQ9ULV0 1848 aa28.39■■■□□ 2.14
CLN8-208ENST00000635751 PTPRMP28827 1452 aa28.35■■■□□ 2.13
CLN8-208ENST00000635751 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
CLN8-208ENST00000635751 ADGRB3O60242 1522 aa28.34■■■□□ 2.13
CLN8-208ENST00000635751 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
CLN8-208ENST00000635751 TMEM131LA2VDJ0 1609 aa28.33■■■□□ 2.13
CLN8-208ENST00000635751 SETD1BQ9UPS6 1966 aaKnown RBP28.32■■■□□ 2.12
CLN8-208ENST00000635751 KDM4FA0A1W2PPD8 638 aa28.32■■■□□ 2.12
CLN8-208ENST00000635751 DCAF11Q8TEB1 546 aa28.32■■■□□ 2.12
CLN8-208ENST00000635751 ZNF326Q5BKZ1 582 aaKnown RBP28.3■■■□□ 2.12
CLN8-208ENST00000635751 KDM2AQ9Y2K7 1162 aa28.3■■■□□ 2.12
CLN8-208ENST00000635751 STAG3Q9UJ98 1225 aa28.29■■■□□ 2.12
CLN8-208ENST00000635751 NLRP1Q9C000 1473 aa28.26■■■□□ 2.11
CLN8-208ENST00000635751 IFT172Q9UG01 1749 aa28.26■■■□□ 2.11
CLN8-208ENST00000635751 MYO3AQ8NEV4 1616 aa28.26■■■□□ 2.11
CLN8-208ENST00000635751 UBR1Q8IWV7 1749 aa28.25■■■□□ 2.11
CLN8-208ENST00000635751 PPLO60437 1756 aa28.24■■■□□ 2.11
CLN8-208ENST00000635751 A2ML1A8K2U0 1454 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms