RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 RRP7BPQ9NSQ0 103 aa32.02■■■□□ 2.72
SF1-221ENST00000633899 ANKRD30AQ9BXX3 1397 aa32.02■■■□□ 2.72
SF1-221ENST00000633899 ZMYM3Q14202 1370 aa32.01■■■□□ 2.71
SF1-221ENST00000633899 RNF17Q9BXT8 1623 aaKnown RBP32■■■□□ 2.71
SF1-221ENST00000633899 FAM135AQ9P2D6 1515 aa32■■■□□ 2.71
SF1-221ENST00000633899 KDM5DQ9BY66 1539 aa31.99■■■□□ 2.71
SF1-221ENST00000633899 ERBINQ96RT1 1412 aa31.96■■■□□ 2.71
SF1-221ENST00000633899 UHRF1BP1Q6BDS2 1440 aa31.95■■■□□ 2.71
SF1-221ENST00000633899 WASHC2CQ9Y4E1 1318 aa31.95■■■□□ 2.7
SF1-221ENST00000633899 ADGRL2O95490 1459 aa31.94■■■□□ 2.7
SF1-221ENST00000633899 NCOA1Q15788 1441 aa31.92■■■□□ 2.7
SF1-221ENST00000633899 ZC3H13Q5T200 1668 aaKnown RBP31.92■■■□□ 2.7
SF1-221ENST00000633899 NPATQ14207 1427 aa31.92■■■□□ 2.7
SF1-221ENST00000633899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.88■■■□□ 2.69
SF1-221ENST00000633899 HSPA2P54652 639 aa31.87■■■□□ 2.69
SF1-221ENST00000633899 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
SF1-221ENST00000633899 ITGAEP38570 1179 aa31.86■■■□□ 2.69
SF1-221ENST00000633899 PTPRKQ15262 1439 aa31.85■■■□□ 2.69
SF1-221ENST00000633899 CEP152O94986 1710 aa31.85■■■□□ 2.69
SF1-221ENST00000633899 ABCC3O15438 1527 aa31.84■■■□□ 2.69
SF1-221ENST00000633899 RRBP1Q9P2E9 1410 aaKnown RBP31.83■■■□□ 2.69
SF1-221ENST00000633899 PRDM15P57071 1507 aaPredicted RBP31.82■■■□□ 2.68
SF1-221ENST00000633899 DEPDC5O75140 1603 aa31.82■■■□□ 2.68
SF1-221ENST00000633899 PZPP20742 1482 aa31.81■■■□□ 2.68
SF1-221ENST00000633899 MYO3AQ8NEV4 1616 aa31.8■■■□□ 2.68
SF1-221ENST00000633899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.8■■■□□ 2.681e-12■■■□□ 16.6
SF1-221ENST00000633899 KANK1Q14678 1352 aa31.79■■■□□ 2.68
SF1-221ENST00000633899 ANKRD50Q9ULJ7 1429 aa31.78■■■□□ 2.68
SF1-221ENST00000633899 ROCK1Q13464 1354 aa31.78■■■□□ 2.68
SF1-221ENST00000633899 CAMSAP1Q5T5Y3 1602 aa31.78■■■□□ 2.68
SF1-221ENST00000633899 ZNF142P52746 1687 aaPredicted RBP31.73■■■□□ 2.67
SF1-221ENST00000633899 FBXO31Q5XUX0 539 aaPredicted RBP31.72■■■□□ 2.67
SF1-221ENST00000633899 CFAP65Q6ZU64 1925 aaKnown RBP31.71■■■□□ 2.67
SF1-221ENST00000633899 TNRQ92752 1358 aa31.71■■■□□ 2.67
SF1-221ENST00000633899 CEP170BQ9Y4F5 1589 aaPredicted RBP31.71■■■□□ 2.67
SF1-221ENST00000633899 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.65
SF1-221ENST00000633899 A2ML1A8K2U0 1454 aa31.63■■■□□ 2.65
SF1-221ENST00000633899 SPATA31D1Q6ZQQ2 1576 aa31.63■■■□□ 2.65
SF1-221ENST00000633899 STRCQ7RTU9 1775 aa31.63■■■□□ 2.65
SF1-221ENST00000633899 ERVK-7P63135 1459 aa31.62■■■□□ 2.65
SF1-221ENST00000633899 LMTK2Q8IWU2 1503 aa31.62■■■□□ 2.65
SF1-221ENST00000633899 UNC13BO14795 1591 aa31.61■■■□□ 2.65
SF1-221ENST00000633899 ARHGAP31Q2M1Z3 1444 aa31.61■■■□□ 2.65
SF1-221ENST00000633899 NLRP1Q9C000 1473 aa31.59■■■□□ 2.65
SF1-221ENST00000633899 DMRT2Q9Y5R5 561 aa31.56■■■□□ 2.64
SF1-221ENST00000633899 EFCAB6Q5THR3 1501 aa31.55■■■□□ 2.64
SF1-221ENST00000633899 GCC2Q8IWJ2 1684 aa31.54■■■□□ 2.64
SF1-221ENST00000633899 TET3O43151 1660 aa31.53■■■□□ 2.64
SF1-221ENST00000633899 PLA2R1Q13018 1463 aa31.52■■■□□ 2.64
SF1-221ENST00000633899 UGGT1Q9NYU2 1555 aa31.51■■■□□ 2.64
SF1-221ENST00000633899 IQGAP3Q86VI3 1631 aa31.49■■■□□ 2.63
SF1-221ENST00000633899 THEMISQ8N1K5 641 aaPredicted RBP31.46■■■□□ 2.63
SF1-221ENST00000633899 RPRD2Q5VT52 1461 aaKnown RBP31.46■■■□□ 2.63
SF1-221ENST00000633899 NUP155O75694 1391 aa31.45■■■□□ 2.63
SF1-221ENST00000633899 PTPRTO14522 1441 aa31.45■■■□□ 2.63
SF1-221ENST00000633899 NAIPQ13075 1403 aa31.45■■■□□ 2.63
SF1-221ENST00000633899 POLR1AO95602 1720 aaPredicted RBP31.44■■■□□ 2.62
SF1-221ENST00000633899 PKD2Q13563 968 aa31.44■■■□□ 2.62
SF1-221ENST00000633899 NCKAP5LQ9HCH0 1330 aa31.44■■■□□ 2.62
SF1-221ENST00000633899 HFM1A2PYH4 1435 aa31.41■■■□□ 2.62
SF1-221ENST00000633899 UBR1Q8IWV7 1749 aa31.41■■■□□ 2.62
SF1-221ENST00000633899 E9PCH4 1651 aa31.39■■■□□ 2.62
SF1-221ENST00000633899 SYNMO15061 1565 aa31.39■■■□□ 2.61
SF1-221ENST00000633899 PIK3C2BO00750 1634 aa31.38■■■□□ 2.61
SF1-221ENST00000633899 NOS1P29475 1434 aa31.38■■■□□ 2.61
SF1-221ENST00000633899 STAG3Q9UJ98 1225 aa31.37■■■□□ 2.61
SF1-221ENST00000633899 ANKLE2Q86XL3 938 aa31.35■■■□□ 2.61
SF1-221ENST00000633899 KDM5AP29375 1690 aaKnown RBP31.32■■■□□ 2.6
SF1-221ENST00000633899 SLC52A1Q9NWF4 448 aa31.3■■■□□ 2.6
SF1-221ENST00000633899 IDI1Q13907 227 aa31.29■■■□□ 2.6
SF1-221ENST00000633899 TRIM52Q96A61 297 aa31.29■■■□□ 2.6
SF1-221ENST00000633899 NEURL4Q96JN8 1562 aa31.29■■■□□ 2.6
SF1-221ENST00000633899 ADGRB3O60242 1522 aa31.26■■■□□ 2.59
SF1-221ENST00000633899 SPHKAPQ2M3C7 1700 aa31.23■■■□□ 2.59
SF1-221ENST00000633899 SLIT1O75093 1534 aa31.23■■■□□ 2.59
SF1-221ENST00000633899 IQGAP1P46940 1657 aa31.22■■■□□ 2.59
SF1-221ENST00000633899 NPHP4O75161 1426 aaPredicted RBP31.22■■■□□ 2.59
SF1-221ENST00000633899 EID1Q9Y6B2 187 aa31.21■■■□□ 2.59
SF1-221ENST00000633899 MED14O60244 1454 aa31.21■■■□□ 2.59
SF1-221ENST00000633899 SCAF11Q99590 1463 aaKnown RBP31.21■■■□□ 2.59
SF1-221ENST00000633899 ARHGAP23Q9P227 1491 aa31.21■■■□□ 2.59
SF1-221ENST00000633899 MYO5BQ9ULV0 1848 aa31.2■■■□□ 2.59
SF1-221ENST00000633899 TMEM2Q9UHN6 1383 aa31.18■■■□□ 2.58
SF1-221ENST00000633899 TXNDC2Q86VQ3 553 aa31.18■■■□□ 2.58
SF1-221ENST00000633899 CERKQ8TCT0 537 aa31.18■■■□□ 2.58
SF1-221ENST00000633899 CHGAP10645 457 aaKnown RBP31.16■■■□□ 2.58
SF1-221ENST00000633899 SLC4A1APQ9BWU0 796 aaKnown RBP31.14■■■□□ 2.58
SF1-221ENST00000633899 ZNF335Q9H4Z2 1342 aaPredicted RBP31.14■■■□□ 2.58
SF1-221ENST00000633899 TMEM131LA2VDJ0 1609 aa31.13■■■□□ 2.57
SF1-221ENST00000633899 LTBP4Q8N2S1 1624 aa31.13■■■□□ 2.57
SF1-221ENST00000633899 SETD5Q9C0A6 1442 aa31.13■■■□□ 2.57
SF1-221ENST00000633899 LTKP29376 864 aa31.11■■■□□ 2.57
SF1-221ENST00000633899 ACIN1Q9UKV3 1341 aaKnown RBP31.1■■■□□ 2.57
SF1-221ENST00000633899 ILDR1Q86SU0 546 aaPredicted RBP31.08■■■□□ 2.57
SF1-221ENST00000633899 FBXO41Q8TF61 875 aa31.07■■■□□ 2.56
SF1-221ENST00000633899 TRPM2O94759 1503 aa31.07■■■□□ 2.56
SF1-221ENST00000633899 HDGFP51858 240 aaKnown RBP31.06■■■□□ 2.56
SF1-221ENST00000633899 PPP1R15AO75807 674 aaPredicted RBP31.03■■■□□ 2.56
SF1-221ENST00000633899 RIMS2Q9UQ26 1411 aa31.03■■■□□ 2.56
SF1-221ENST00000633899 KIF1BO60333 1816 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms