RNA–Protein interactions for RNA: ENST00000633534.1

PALM-211, Transcript of paralemmin, humanhuman

TSL 3

Gene PALM, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-211ENST00000633534 ERBINQ96RT1 1412 aa30.02■■■□□ 2.4
PALM-211ENST00000633534 MROH2AA6NES4 1674 aa30■■■□□ 2.39
PALM-211ENST00000633534 CLTCQ00610 1675 aaKnown RBP30■■■□□ 2.39
PALM-211ENST00000633534 C3P01024 1663 aa29.99■■■□□ 2.39
PALM-211ENST00000633534 PTPRKQ15262 1439 aa29.98■■■□□ 2.39
PALM-211ENST00000633534 RNF17Q9BXT8 1623 aaKnown RBP29.98■■■□□ 2.39
PALM-211ENST00000633534 FAM135AQ9P2D6 1515 aa29.97■■■□□ 2.39
PALM-211ENST00000633534 ITGAEP38570 1179 aa29.97■■■□□ 2.39
PALM-211ENST00000633534 KDM5DQ9BY66 1539 aa29.96■■■□□ 2.39
PALM-211ENST00000633534 ZMYM3Q14202 1370 aa29.96■■■□□ 2.39
PALM-211ENST00000633534 WASHC2CQ9Y4E1 1318 aa29.94■■■□□ 2.38
PALM-211ENST00000633534 ROCK1Q13464 1354 aa29.9■■■□□ 2.38
PALM-211ENST00000633534 MROH1Q8NDA8 1641 aa29.89■■■□□ 2.38
PALM-211ENST00000633534 LMTK3Q96Q04 1460 aa29.88■■■□□ 2.37
PALM-211ENST00000633534 NPATQ14207 1427 aa29.87■■■□□ 2.37
PALM-211ENST00000633534 ANKRD50Q9ULJ7 1429 aa29.87■■■□□ 2.37
PALM-211ENST00000633534 ABCC3O15438 1527 aa29.86■■■□□ 2.37
PALM-211ENST00000633534 PRDM15P57071 1507 aaPredicted RBP29.86■■■□□ 2.37
PALM-211ENST00000633534 ZC3H13Q5T200 1668 aaKnown RBP29.85■■■□□ 2.37
PALM-211ENST00000633534 PREX1Q8TCU6 1659 aa29.85■■■□□ 2.37
PALM-211ENST00000633534 UHRF1BP1Q6BDS2 1440 aa29.84■■■□□ 2.37
PALM-211ENST00000633534 DEPDC5O75140 1603 aa29.83■■■□□ 2.37
PALM-211ENST00000633534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.83■■■□□ 2.37
PALM-211ENST00000633534 KANK1Q14678 1352 aa29.81■■■□□ 2.36
PALM-211ENST00000633534 PZPP20742 1482 aa29.8■■■□□ 2.36
PALM-211ENST00000633534 CEP152O94986 1710 aa29.76■■■□□ 2.36
PALM-211ENST00000633534 HSPA2P54652 639 aa29.75■■■□□ 2.35
PALM-211ENST00000633534 CAMSAP1Q5T5Y3 1602 aa29.74■■■□□ 2.35
PALM-211ENST00000633534 SETD1BQ9UPS6 1966 aaKnown RBP29.73■■■□□ 2.35
PALM-211ENST00000633534 FBXO31Q5XUX0 539 aaPredicted RBP29.72■■■□□ 2.35
PALM-211ENST00000633534 VWDEQ8N2E2 1590 aa29.71■■■□□ 2.35
PALM-211ENST00000633534 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
PALM-211ENST00000633534 TNRQ92752 1358 aa29.7■■■□□ 2.35
PALM-211ENST00000633534 LMTK2Q8IWU2 1503 aa29.69■■■□□ 2.34
PALM-211ENST00000633534 UNC13BO14795 1591 aa29.68■■■□□ 2.34
PALM-211ENST00000633534 ARHGAP31Q2M1Z3 1444 aa29.66■■■□□ 2.34
PALM-211ENST00000633534 NAIPQ13075 1403 aa29.64■■■□□ 2.34
PALM-211ENST00000633534 ERVK-7P63135 1459 aa29.64■■■□□ 2.34
PALM-211ENST00000633534 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
PALM-211ENST00000633534 CEP170BQ9Y4F5 1589 aaPredicted RBP29.63■■■□□ 2.33
PALM-211ENST00000633534 ZNF142P52746 1687 aaPredicted RBP29.63■■■□□ 2.33
PALM-211ENST00000633534 GCC2Q8IWJ2 1684 aa29.63■■■□□ 2.33
PALM-211ENST00000633534 HFM1A2PYH4 1435 aa29.61■■■□□ 2.33
PALM-211ENST00000633534 EFCAB6Q5THR3 1501 aa29.61■■■□□ 2.33
PALM-211ENST00000633534 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
PALM-211ENST00000633534 NLRP1Q9C000 1473 aa29.58■■■□□ 2.33
PALM-211ENST00000633534 NUP155O75694 1391 aa29.57■■■□□ 2.32
PALM-211ENST00000633534 TET3O43151 1660 aa29.55■■■□□ 2.32
PALM-211ENST00000633534 IQGAP3Q86VI3 1631 aa29.55■■■□□ 2.32
PALM-211ENST00000633534 RPRD2Q5VT52 1461 aaKnown RBP29.51■■■□□ 2.31
PALM-211ENST00000633534 UGGT1Q9NYU2 1555 aa29.47■■■□□ 2.31
PALM-211ENST00000633534 PLA2R1Q13018 1463 aa29.47■■■□□ 2.31
PALM-211ENST00000633534 NOS1P29475 1434 aa29.46■■■□□ 2.31
PALM-211ENST00000633534 CFAP65Q6ZU64 1925 aaKnown RBP29.46■■■□□ 2.31
PALM-211ENST00000633534 STRCQ7RTU9 1775 aa29.45■■■□□ 2.31
PALM-211ENST00000633534 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
PALM-211ENST00000633534 DMRT2Q9Y5R5 561 aa29.43■■■□□ 2.3
PALM-211ENST00000633534 SYNMO15061 1565 aa29.43■■■□□ 2.3
PALM-211ENST00000633534 E9PCH4 1651 aa29.42■■■□□ 2.3
PALM-211ENST00000633534 TRIM52Q96A61 297 aa29.42■■■□□ 2.3
PALM-211ENST00000633534 NCKAP5LQ9HCH0 1330 aa29.39■■■□□ 2.3
PALM-211ENST00000633534 PKD2Q13563 968 aa29.38■■■□□ 2.29
PALM-211ENST00000633534 PIK3C2BO00750 1634 aa29.37■■■□□ 2.29
PALM-211ENST00000633534 SLC52A1Q9NWF4 448 aa29.36■■■□□ 2.29
PALM-211ENST00000633534 UBR1Q8IWV7 1749 aa29.36■■■□□ 2.29
PALM-211ENST00000633534 PTPRTO14522 1441 aa29.36■■■□□ 2.29
PALM-211ENST00000633534 SETD5Q9C0A6 1442 aa29.36■■■□□ 2.29
PALM-211ENST00000633534 IDI1Q13907 227 aa29.35■■■□□ 2.29
PALM-211ENST00000633534 STAG3Q9UJ98 1225 aa29.35■■■□□ 2.29
PALM-211ENST00000633534 ANKLE2Q86XL3 938 aa29.31■■■□□ 2.28
PALM-211ENST00000633534 ADGRB3O60242 1522 aa29.3■■■□□ 2.28
PALM-211ENST00000633534 SLC4A1APQ9BWU0 796 aaKnown RBP29.29■■■□□ 2.28
PALM-211ENST00000633534 POLR1AO95602 1720 aaPredicted RBP29.28■■■□□ 2.28
PALM-211ENST00000633534 KDM5AP29375 1690 aaKnown RBP29.28■■■□□ 2.28
PALM-211ENST00000633534 ACIN1Q9UKV3 1341 aaKnown RBP29.27■■■□□ 2.28
PALM-211ENST00000633534 NEURL4Q96JN8 1562 aa29.26■■■□□ 2.27
PALM-211ENST00000633534 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
PALM-211ENST00000633534 SLIT1O75093 1534 aa29.25■■■□□ 2.27
PALM-211ENST00000633534 ARHGAP23Q9P227 1491 aa29.24■■■□□ 2.27
PALM-211ENST00000633534 SPHKAPQ2M3C7 1700 aa29.24■■■□□ 2.27
PALM-211ENST00000633534 TMEM2Q9UHN6 1383 aa29.23■■■□□ 2.27
PALM-211ENST00000633534 SCAF11Q99590 1463 aaKnown RBP29.21■■■□□ 2.27
PALM-211ENST00000633534 NPHP4O75161 1426 aaPredicted RBP29.2■■■□□ 2.27
PALM-211ENST00000633534 CHGAP10645 457 aaKnown RBP29.2■■■□□ 2.26
PALM-211ENST00000633534 EID1Q9Y6B2 187 aa29.2■■■□□ 2.26
PALM-211ENST00000633534 MED14O60244 1454 aa29.2■■■□□ 2.26
PALM-211ENST00000633534 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
PALM-211ENST00000633534 TRPM2O94759 1503 aa29.19■■■□□ 2.26
PALM-211ENST00000633534 TMEM131LA2VDJ0 1609 aa29.17■■■□□ 2.26
PALM-211ENST00000633534 LTKP29376 864 aa29.16■■■□□ 2.26
PALM-211ENST00000633534 MPHOSPH9Q99550 1183 aa29.16■■■□□ 2.26
PALM-211ENST00000633534 IQGAP1P46940 1657 aa29.14■■■□□ 2.26
PALM-211ENST00000633534 FOXD1Q16676 465 aa29.11■■■□□ 2.25
PALM-211ENST00000633534 CLTCL1P53675 1640 aa29.11■■■□□ 2.25
PALM-211ENST00000633534 RIMS2Q9UQ26 1411 aa29.1■■■□□ 2.25
PALM-211ENST00000633534 MYO5BQ9ULV0 1848 aa29.09■■■□□ 2.25
PALM-211ENST00000633534 ZNF335Q9H4Z2 1342 aaPredicted RBP29.09■■■□□ 2.25
PALM-211ENST00000633534 HRCP23327 699 aa29.08■■■□□ 2.25
PALM-211ENST00000633534 ZFYVE9O95405 1425 aa29.08■■■□□ 2.25
PALM-211ENST00000633534 HDGFP51858 240 aaKnown RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms