RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-222ENST00000630907 RNF17Q9BXT8 1623 aaKnown RBP39.1■■■■□ 3.85
UBE3A-222ENST00000630907 TRIM26Q12899 539 aaPredicted RBP39.07■■■■□ 3.85
UBE3A-222ENST00000630907 GCC2Q8IWJ2 1684 aa39.06■■■■□ 3.84
UBE3A-222ENST00000630907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.05■■■■□ 3.84
UBE3A-222ENST00000630907 FER1L4A9Z1Z3 1794 aa39.04■■■■□ 3.84
UBE3A-222ENST00000630907 MROH1Q8NDA8 1641 aa39.01■■■■□ 3.84
UBE3A-222ENST00000630907 CNTLNQ9NXG0 1405 aa39.01■■■■□ 3.84
UBE3A-222ENST00000630907 WASHC2CQ9Y4E1 1318 aa39.01■■■■□ 3.84
UBE3A-222ENST00000630907 RIMS1Q86UR5 1692 aaKnown RBP39■■■■□ 3.83
UBE3A-222ENST00000630907 DEPDC5O75140 1603 aa39■■■■□ 3.83
UBE3A-222ENST00000630907 KANK1Q14678 1352 aa38.98■■■■□ 3.83
UBE3A-222ENST00000630907 PRDM15P57071 1507 aaPredicted RBP38.98■■■■□ 3.83
UBE3A-222ENST00000630907 FAM135AQ9P2D6 1515 aa38.98■■■■□ 3.83
UBE3A-222ENST00000630907 KDM5DQ9BY66 1539 aa38.95■■■■□ 3.83
UBE3A-222ENST00000630907 SETD5Q9C0A6 1442 aa38.95■■■■□ 3.83
UBE3A-222ENST00000630907 PTPRMP28827 1452 aa38.94■■■■□ 3.82
UBE3A-222ENST00000630907 CLTCQ00610 1675 aaKnown RBP38.93■■■■□ 3.82
UBE3A-222ENST00000630907 UNC13BO14795 1591 aa38.91■■■■□ 3.82
UBE3A-222ENST00000630907 ABCC3O15438 1527 aa38.9■■■■□ 3.82
UBE3A-222ENST00000630907 ZMYM3Q14202 1370 aa38.89■■■■□ 3.82
UBE3A-222ENST00000630907 VWDEQ8N2E2 1590 aa38.87■■■■□ 3.81
UBE3A-222ENST00000630907 NUP155O75694 1391 aa38.87■■■■□ 3.81
UBE3A-222ENST00000630907 PLPPR3Q6T4P5 718 aa38.87■■■■□ 3.81
UBE3A-222ENST00000630907 ZC3H13Q5T200 1668 aaKnown RBP38.87■■■■□ 3.81
UBE3A-222ENST00000630907 CEBPAP49715 358 aaPredicted RBP38.86■■■■□ 3.81
UBE3A-222ENST00000630907 MROH2AA6NES4 1674 aa38.86■■■■□ 3.81
UBE3A-222ENST00000630907 TRIM52Q96A61 297 aa38.82■■■■□ 3.8
UBE3A-222ENST00000630907 RAB3GAP2Q9H2M9 1393 aa38.82■■■■□ 3.8
UBE3A-222ENST00000630907 CEP152O94986 1710 aa38.81■■■■□ 3.8
UBE3A-222ENST00000630907 LMTK2Q8IWU2 1503 aa38.81■■■■□ 3.8
UBE3A-222ENST00000630907 C3P01024 1663 aa38.78■■■■□ 3.8
UBE3A-222ENST00000630907 ACIN1Q9UKV3 1341 aaKnown RBP38.77■■■■□ 3.8
UBE3A-222ENST00000630907 IQGAP3Q86VI3 1631 aa38.75■■■■□ 3.79
UBE3A-222ENST00000630907 AEBP2Q6ZN18 517 aaPredicted RBP38.75■■■■□ 3.79
UBE3A-222ENST00000630907 CAMSAP1Q5T5Y3 1602 aa38.74■■■■□ 3.79
UBE3A-222ENST00000630907 HRCP23327 699 aa38.72■■■■□ 3.79
UBE3A-222ENST00000630907 PZPP20742 1482 aa38.72■■■■□ 3.79
UBE3A-222ENST00000630907 ARHGAP31Q2M1Z3 1444 aa38.71■■■■□ 3.79
UBE3A-222ENST00000630907 FBXO31Q5XUX0 539 aaPredicted RBP38.68■■■■□ 3.78
UBE3A-222ENST00000630907 TET3O43151 1660 aa38.68■■■■□ 3.78
UBE3A-222ENST00000630907 EFCAB6Q5THR3 1501 aa38.67■■■■□ 3.78
UBE3A-222ENST00000630907 NPATQ14207 1427 aa38.66■■■■□ 3.78
UBE3A-222ENST00000630907 SLC4A1APQ9BWU0 796 aaKnown RBP38.62■■■■□ 3.77
UBE3A-222ENST00000630907 PCGF6Q9BYE7 350 aa38.6■■■■□ 3.77
UBE3A-222ENST00000630907 RPRD2Q5VT52 1461 aaKnown RBP38.59■■■■□ 3.77
UBE3A-222ENST00000630907 ERVK-7P63135 1459 aa38.57■■■■□ 3.76
UBE3A-222ENST00000630907 MPHOSPH9Q99550 1183 aa38.56■■■■□ 3.76
UBE3A-222ENST00000630907 TNRQ92752 1358 aa38.56■■■■□ 3.76
UBE3A-222ENST00000630907 SPATA31D1Q6ZQQ2 1576 aa38.54■■■■□ 3.76
UBE3A-222ENST00000630907 PKD2Q13563 968 aa38.54■■■■□ 3.76
UBE3A-222ENST00000630907 E9PCH4 1651 aa38.53■■■■□ 3.76
UBE3A-222ENST00000630907 SETD1BQ9UPS6 1966 aaKnown RBP38.52■■■■□ 3.76
UBE3A-222ENST00000630907 PREX1Q8TCU6 1659 aa38.52■■■■□ 3.76
UBE3A-222ENST00000630907 CFAP65Q6ZU64 1925 aaKnown RBP38.51■■■■□ 3.76
UBE3A-222ENST00000630907 NOS1P29475 1434 aa38.48■■■■□ 3.75
UBE3A-222ENST00000630907 UHRF1BP1Q6BDS2 1440 aa38.46■■■■□ 3.75
UBE3A-222ENST00000630907 FOXD1Q16676 465 aa38.4■■■■□ 3.74
UBE3A-222ENST00000630907 MYO3AQ8NEV4 1616 aa38.39■■■■□ 3.74
UBE3A-222ENST00000630907 NLRP1Q9C000 1473 aa38.39■■■■□ 3.74
UBE3A-222ENST00000630907 SYNMO15061 1565 aa38.38■■■■□ 3.73
UBE3A-222ENST00000630907 PTPRTO14522 1441 aa38.38■■■■□ 3.73
UBE3A-222ENST00000630907 SLC52A1Q9NWF4 448 aa38.36■■■■□ 3.73
UBE3A-222ENST00000630907 LMTK3Q96Q04 1460 aa38.35■■■■□ 3.73
UBE3A-222ENST00000630907 A2ML1A8K2U0 1454 aa38.34■■■■□ 3.73
UBE3A-222ENST00000630907 IDI1Q13907 227 aa38.33■■■■□ 3.73
UBE3A-222ENST00000630907 SPHKAPQ2M3C7 1700 aa38.31■■■■□ 3.72
UBE3A-222ENST00000630907 CEP170BQ9Y4F5 1589 aaPredicted RBP38.31■■■■□ 3.72
UBE3A-222ENST00000630907 PLA2R1Q13018 1463 aa38.29■■■■□ 3.72
UBE3A-222ENST00000630907 TRPM2O94759 1503 aa38.27■■■■□ 3.72
UBE3A-222ENST00000630907 ZNF142P52746 1687 aaPredicted RBP38.27■■■■□ 3.72
UBE3A-222ENST00000630907 UGGT1Q9NYU2 1555 aa38.25■■■■□ 3.71
UBE3A-222ENST00000630907 HSPA2P54652 639 aa38.24■■■■□ 3.71
UBE3A-222ENST00000630907 STAG3Q9UJ98 1225 aa38.23■■■■□ 3.71
UBE3A-222ENST00000630907 PIK3C2BO00750 1634 aa38.23■■■■□ 3.71
UBE3A-222ENST00000630907 THEMISQ8N1K5 641 aaPredicted RBP38.21■■■■□ 3.71
UBE3A-222ENST00000630907 CHGAP10645 457 aaKnown RBP38.16■■■■□ 3.7
UBE3A-222ENST00000630907 DHX57Q6P158 1386 aaKnown RBP38.16■■■■□ 3.7
UBE3A-222ENST00000630907 ANKRD30BQ9BXX2 1392 aa38.16■■■■□ 3.7
UBE3A-222ENST00000630907 CLTCL1P53675 1640 aa38.15■■■■□ 3.7
UBE3A-222ENST00000630907 CCDC144AA2RUR9 1427 aa38.14■■■■□ 3.7
UBE3A-222ENST00000630907 UBR1Q8IWV7 1749 aa38.14■■■■□ 3.7
UBE3A-222ENST00000630907 ADGRB3O60242 1522 aa38.13■■■■□ 3.69
UBE3A-222ENST00000630907 KDM5AP29375 1690 aaKnown RBP38.1■■■■□ 3.69
UBE3A-222ENST00000630907 TMEM131LA2VDJ0 1609 aa38.07■■■■□ 3.68
UBE3A-222ENST00000630907 TMEM2Q9UHN6 1383 aa38.02■■■■□ 3.68
UBE3A-222ENST00000630907 ANKLE2Q86XL3 938 aa38■■■■□ 3.67
UBE3A-222ENST00000630907 KIF1BO60333 1816 aa38■■■■□ 3.67
UBE3A-222ENST00000630907 SLIT1O75093 1534 aa37.99■■■■□ 3.67
UBE3A-222ENST00000630907 ARHGAP23Q9P227 1491 aa37.99■■■■□ 3.67
UBE3A-222ENST00000630907 ZNF326Q5BKZ1 582 aaKnown RBP37.98■■■■□ 3.67
UBE3A-222ENST00000630907 NCKAP5LQ9HCH0 1330 aa37.97■■■■□ 3.67
UBE3A-222ENST00000630907 MYO5BQ9ULV0 1848 aa37.97■■■■□ 3.67
UBE3A-222ENST00000630907 EID1Q9Y6B2 187 aa37.96■■■■□ 3.67
UBE3A-222ENST00000630907 TXNDC2Q86VQ3 553 aa37.95■■■■□ 3.67
UBE3A-222ENST00000630907 HDGFP51858 240 aaKnown RBP37.93■■■■□ 3.66
UBE3A-222ENST00000630907 RIMS2Q9UQ26 1411 aa37.93■■■■□ 3.66
UBE3A-222ENST00000630907 LTKP29376 864 aa37.92■■■■□ 3.66
UBE3A-222ENST00000630907 SPATA31E1Q6ZUB1 1445 aa37.92■■■■□ 3.66
UBE3A-222ENST00000630907 STRCQ7RTU9 1775 aa37.9■■■■□ 3.66
UBE3A-222ENST00000630907 ZFYVE9O95405 1425 aa37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms