RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
SOX2-OT-257ENST00000630553 TNRQ92752 1358 aa16.24■□□□□ 0.19
SOX2-OT-257ENST00000630553 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-257ENST00000630553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
SOX2-OT-257ENST00000630553 PLEKHH2Q8IVE3 1493 aa16.22■□□□□ 0.19
SOX2-OT-257ENST00000630553 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
SOX2-OT-257ENST00000630553 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-257ENST00000630553 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-257ENST00000630553 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
SOX2-OT-257ENST00000630553 ADGBQ8N7X0 1667 aa16.2■□□□□ 0.18
SOX2-OT-257ENST00000630553 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
SOX2-OT-257ENST00000630553 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
SOX2-OT-257ENST00000630553 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-257ENST00000630553 KIF3BO15066 747 aa16.18■□□□□ 0.18
SOX2-OT-257ENST00000630553 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
SOX2-OT-257ENST00000630553 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
SOX2-OT-257ENST00000630553 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
SOX2-OT-257ENST00000630553 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
SOX2-OT-257ENST00000630553 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
SOX2-OT-257ENST00000630553 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
SOX2-OT-257ENST00000630553 UGGT1Q9NYU2 1555 aa16.15■□□□□ 0.18
SOX2-OT-257ENST00000630553 PZPP20742 1482 aa16.14■□□□□ 0.17
SOX2-OT-257ENST00000630553 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-257ENST00000630553 MIA2Q96PC5 1412 aa16.13■□□□□ 0.17
SOX2-OT-257ENST00000630553 MED14O60244 1454 aa16.13■□□□□ 0.17
SOX2-OT-257ENST00000630553 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
SOX2-OT-257ENST00000630553 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 IQGAP1P46940 1657 aa16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
SOX2-OT-257ENST00000630553 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
SOX2-OT-257ENST00000630553 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
SOX2-OT-257ENST00000630553 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
SOX2-OT-257ENST00000630553 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
SOX2-OT-257ENST00000630553 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
SOX2-OT-257ENST00000630553 SYNMO15061 1565 aa16.08■□□□□ 0.16
SOX2-OT-257ENST00000630553 MBD5Q9P267 1494 aa16.04■□□□□ 0.16
SOX2-OT-257ENST00000630553 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
SOX2-OT-257ENST00000630553 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SOX2-OT-257ENST00000630553 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SOX2-OT-257ENST00000630553 CCDC141Q6ZP82 1450 aa15.99■□□□□ 0.15
SOX2-OT-257ENST00000630553 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
SOX2-OT-257ENST00000630553 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
SOX2-OT-257ENST00000630553 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
SOX2-OT-257ENST00000630553 FAM135BQ49AJ0 1406 aa15.99■□□□□ 0.15
SOX2-OT-257ENST00000630553 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-257ENST00000630553 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-257ENST00000630553 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-257ENST00000630553 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-257ENST00000630553 LTKP29376 864 aa15.96■□□□□ 0.15
SOX2-OT-257ENST00000630553 NCOA2Q15596 1464 aa15.95■□□□□ 0.14
SOX2-OT-257ENST00000630553 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
SOX2-OT-257ENST00000630553 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
SOX2-OT-257ENST00000630553 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
SOX2-OT-257ENST00000630553 UBR1Q8IWV7 1749 aa15.93■□□□□ 0.14
SOX2-OT-257ENST00000630553 ABCC3O15438 1527 aa15.93■□□□□ 0.14
SOX2-OT-257ENST00000630553 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
SOX2-OT-257ENST00000630553 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
SOX2-OT-257ENST00000630553 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
SOX2-OT-257ENST00000630553 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
SOX2-OT-257ENST00000630553 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-257ENST00000630553 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
SOX2-OT-257ENST00000630553 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
SOX2-OT-257ENST00000630553 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
SOX2-OT-257ENST00000630553 KCNA6P17658 529 aa15.88■□□□□ 0.13
SOX2-OT-257ENST00000630553 BCANQ96GW7 911 aa15.87■□□□□ 0.13
SOX2-OT-257ENST00000630553 SLIT1O75093 1534 aa15.87■□□□□ 0.13
SOX2-OT-257ENST00000630553 JCADQ9P266 1359 aa15.87■□□□□ 0.13
SOX2-OT-257ENST00000630553 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
SOX2-OT-257ENST00000630553 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-257ENST00000630553 ZNF772Q68DY9 489 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-257ENST00000630553 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
SOX2-OT-257ENST00000630553 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
SOX2-OT-257ENST00000630553 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
SOX2-OT-257ENST00000630553 MSH6P52701 1360 aa15.85■□□□□ 0.13
SOX2-OT-257ENST00000630553 CEP152O94986 1710 aa15.85■□□□□ 0.13
SOX2-OT-257ENST00000630553 MYOM3Q5VTT5 1437 aa15.84■□□□□ 0.13
SOX2-OT-257ENST00000630553 ARHGEF5Q12774 1597 aa15.83■□□□□ 0.13
SOX2-OT-257ENST00000630553 TMEM2Q9UHN6 1383 aa15.83■□□□□ 0.12
SOX2-OT-257ENST00000630553 SRCAPQ6ZRS2 3230 aa15.83■□□□□ 0.12
SOX2-OT-257ENST00000630553 APLP2Q06481 763 aa15.82■□□□□ 0.12
SOX2-OT-257ENST00000630553 RXRBP28702 533 aa15.81■□□□□ 0.12
SOX2-OT-257ENST00000630553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
SOX2-OT-257ENST00000630553 EIF2AK4Q9P2K8 1649 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-257ENST00000630553 PRDM15P57071 1507 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-257ENST00000630553 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
SOX2-OT-257ENST00000630553 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
SOX2-OT-257ENST00000630553 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
SOX2-OT-257ENST00000630553 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
SOX2-OT-257ENST00000630553 MROH1Q8NDA8 1641 aa15.78■□□□□ 0.12
SOX2-OT-257ENST00000630553 CROCC2H7BZ55 1655 aa15.77■□□□□ 0.12
SOX2-OT-257ENST00000630553 ARHGAP31Q2M1Z3 1444 aa15.77■□□□□ 0.11
SOX2-OT-257ENST00000630553 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
SOX2-OT-257ENST00000630553 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
SOX2-OT-257ENST00000630553 IDI1Q13907 227 aa15.76■□□□□ 0.11
SOX2-OT-257ENST00000630553 EFCAB6Q5THR3 1501 aa15.76■□□□□ 0.11
SOX2-OT-257ENST00000630553 NKTRP30414 1462 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-257ENST00000630553 KANK1Q14678 1352 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms