RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.783e-10■■■■□ 26.2
SPTAN1-217ENST00000629089 SIGLEC1Q9BZZ2 1709 aa26.18■■□□□ 1.78
SPTAN1-217ENST00000629089 UNC13BO14795 1591 aa26.17■■□□□ 1.78
SPTAN1-217ENST00000629089 GGT6Q6P531 493 aa26.16■■□□□ 1.78
SPTAN1-217ENST00000629089 DEPDC5O75140 1603 aa26.15■■□□□ 1.78
SPTAN1-217ENST00000629089 RNF17Q9BXT8 1623 aaKnown RBP26.15■■□□□ 1.78
SPTAN1-217ENST00000629089 NUP155O75694 1391 aa26.13■■□□□ 1.77
SPTAN1-217ENST00000629089 KANK1Q14678 1352 aa26.11■■□□□ 1.77
SPTAN1-217ENST00000629089 MLECQ14165 292 aa26.1■■□□□ 1.77
SPTAN1-217ENST00000629089 PRDM15P57071 1507 aaPredicted RBP26.1■■□□□ 1.77
SPTAN1-217ENST00000629089 MROH1Q8NDA8 1641 aa26.1■■□□□ 1.77
SPTAN1-217ENST00000629089 KDM5DQ9BY66 1539 aa26.08■■□□□ 1.77
SPTAN1-217ENST00000629089 IQGAP3Q86VI3 1631 aa26.06■■□□□ 1.76
SPTAN1-217ENST00000629089 FAM135AQ9P2D6 1515 aa26.05■■□□□ 1.76
SPTAN1-217ENST00000629089 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
SPTAN1-217ENST00000629089 PZPP20742 1482 aa26.04■■□□□ 1.76
SPTAN1-217ENST00000629089 MPHOSPH9Q99550 1183 aa26.04■■□□□ 1.76
SPTAN1-217ENST00000629089 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
SPTAN1-217ENST00000629089 WASHC2CQ9Y4E1 1318 aa26.03■■□□□ 1.76
SPTAN1-217ENST00000629089 DHX57Q6P158 1386 aaKnown RBP26.01■■□□□ 1.75
SPTAN1-217ENST00000629089 CEP152O94986 1710 aa26■■□□□ 1.75
SPTAN1-217ENST00000629089 PPP6R1Q9UPN7 881 aa26■■□□□ 1.75
SPTAN1-217ENST00000629089 ESF1Q9H501 851 aaKnown RBP25.99■■□□□ 1.75
SPTAN1-217ENST00000629089 ZC3H13Q5T200 1668 aaKnown RBP25.99■■□□□ 1.75
SPTAN1-217ENST00000629089 ABCC3O15438 1527 aa25.98■■□□□ 1.75
SPTAN1-217ENST00000629089 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
SPTAN1-217ENST00000629089 CCER1Q8TC90 406 aaPredicted RBP25.96■■□□□ 1.75
SPTAN1-217ENST00000629089 TET3O43151 1660 aa25.96■■□□□ 1.75
SPTAN1-217ENST00000629089 PKD2Q13563 968 aa25.95■■□□□ 1.74
SPTAN1-217ENST00000629089 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
SPTAN1-217ENST00000629089 CAMSAP1Q5T5Y3 1602 aa25.92■■□□□ 1.74
SPTAN1-217ENST00000629089 FOXD1Q16676 465 aa25.91■■□□□ 1.74
SPTAN1-217ENST00000629089 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
SPTAN1-217ENST00000629089 FER1L4A9Z1Z3 1794 aa25.9■■□□□ 1.74
SPTAN1-217ENST00000629089 E9PCH4 1651 aa25.89■■□□□ 1.73
SPTAN1-217ENST00000629089 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
SPTAN1-217ENST00000629089 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
SPTAN1-217ENST00000629089 ADAMTSL3P82987 1691 aa25.85■■□□□ 1.73
SPTAN1-217ENST00000629089 NPATQ14207 1427 aa25.84■■□□□ 1.73
SPTAN1-217ENST00000629089 RPRD2Q5VT52 1461 aaKnown RBP25.84■■□□□ 1.73
SPTAN1-217ENST00000629089 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
SPTAN1-217ENST00000629089 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.73
SPTAN1-217ENST00000629089 ZMYM3Q14202 1370 aa25.82■■□□□ 1.72
SPTAN1-217ENST00000629089 RIMS1Q86UR5 1692 aaKnown RBP25.81■■□□□ 1.72
SPTAN1-217ENST00000629089 CFAP65Q6ZU64 1925 aaKnown RBP25.79■■□□□ 1.72
SPTAN1-217ENST00000629089 CLSPNQ9HAW4 1339 aa25.79■■□□□ 1.72
SPTAN1-217ENST00000629089 ANKRD30BQ9BXX2 1392 aa25.78■■□□□ 1.72
SPTAN1-217ENST00000629089 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
SPTAN1-217ENST00000629089 C3P01024 1663 aa25.75■■□□□ 1.71
SPTAN1-217ENST00000629089 PREX1Q8TCU6 1659 aa25.75■■□□□ 1.71
SPTAN1-217ENST00000629089 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
SPTAN1-217ENST00000629089 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
SPTAN1-217ENST00000629089 PTPRTO14522 1441 aa25.73■■□□□ 1.71
SPTAN1-217ENST00000629089 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
SPTAN1-217ENST00000629089 TRPM2O94759 1503 aa25.72■■□□□ 1.71
SPTAN1-217ENST00000629089 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
SPTAN1-217ENST00000629089 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
SPTAN1-217ENST00000629089 NOS1P29475 1434 aa25.71■■□□□ 1.71
SPTAN1-217ENST00000629089 SIN3AQ96ST3 1273 aa25.71■■□□□ 1.71
SPTAN1-217ENST00000629089 CCDC144AA2RUR9 1427 aa25.7■■□□□ 1.71
SPTAN1-217ENST00000629089 NEUROD1Q13562 356 aa25.69■■□□□ 1.7
SPTAN1-217ENST00000629089 SPATA31D1Q6ZQQ2 1576 aa25.69■■□□□ 1.7
SPTAN1-217ENST00000629089 SYNMO15061 1565 aa25.66■■□□□ 1.7
SPTAN1-217ENST00000629089 PTPRMP28827 1452 aa25.66■■□□□ 1.7
SPTAN1-217ENST00000629089 KDM4FA0A1W2PPD8 638 aa25.65■■□□□ 1.7
SPTAN1-217ENST00000629089 UGGT1Q9NYU2 1555 aa25.64■■□□□ 1.7
SPTAN1-217ENST00000629089 CLTCL1P53675 1640 aa25.64■■□□□ 1.7
SPTAN1-217ENST00000629089 TNRQ92752 1358 aa25.63■■□□□ 1.69
SPTAN1-217ENST00000629089 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
SPTAN1-217ENST00000629089 PIK3C2BO00750 1634 aa25.6■■□□□ 1.69
SPTAN1-217ENST00000629089 IDI1Q13907 227 aa25.58■■□□□ 1.69
SPTAN1-217ENST00000629089 KIF1BO60333 1816 aa25.57■■□□□ 1.68
SPTAN1-217ENST00000629089 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
SPTAN1-217ENST00000629089 TONSLQ96HA7 1378 aa25.54■■□□□ 1.68
SPTAN1-217ENST00000629089 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
SPTAN1-217ENST00000629089 NLRP1Q9C000 1473 aa25.52■■□□□ 1.68
SPTAN1-217ENST00000629089 RGL3Q3MIN7 710 aa25.52■■□□□ 1.68
SPTAN1-217ENST00000629089 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
SPTAN1-217ENST00000629089 SPATA31E1Q6ZUB1 1445 aa25.49■■□□□ 1.67
SPTAN1-217ENST00000629089 ADGRB3O60242 1522 aa25.49■■□□□ 1.67
SPTAN1-217ENST00000629089 SETD1BQ9UPS6 1966 aaKnown RBP25.48■■□□□ 1.67
SPTAN1-217ENST00000629089 ZNF326Q5BKZ1 582 aaKnown RBP25.47■■□□□ 1.67
SPTAN1-217ENST00000629089 TIMELESSQ9UNS1 1208 aa25.47■■□□□ 1.67
SPTAN1-217ENST00000629089 TMEM131LA2VDJ0 1609 aa25.47■■□□□ 1.67
SPTAN1-217ENST00000629089 NEURL4Q96JN8 1562 aa25.47■■□□□ 1.67
SPTAN1-217ENST00000629089 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
SPTAN1-217ENST00000629089 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
SPTAN1-217ENST00000629089 L3MBTL2Q969R5 705 aa25.44■■□□□ 1.66
SPTAN1-217ENST00000629089 A2ML1A8K2U0 1454 aa25.43■■□□□ 1.66
SPTAN1-217ENST00000629089 CEP170BQ9Y4F5 1589 aaPredicted RBP25.43■■□□□ 1.66
SPTAN1-217ENST00000629089 UHRF1BP1Q6BDS2 1440 aa25.43■■□□□ 1.66
SPTAN1-217ENST00000629089 KDM5AP29375 1690 aaKnown RBP25.42■■□□□ 1.66
SPTAN1-217ENST00000629089 UBR1Q8IWV7 1749 aa25.42■■□□□ 1.66
SPTAN1-217ENST00000629089 DCAF11Q8TEB1 546 aa25.41■■□□□ 1.66
SPTAN1-217ENST00000629089 ZNF142P52746 1687 aaPredicted RBP25.4■■□□□ 1.66
SPTAN1-217ENST00000629089 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
SPTAN1-217ENST00000629089 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
SPTAN1-217ENST00000629089 THEMISQ8N1K5 641 aaPredicted RBP25.36■■□□□ 1.65
SPTAN1-217ENST00000629089 NEXMIFQ5QGS0 1516 aa25.34■■□□□ 1.65
SPTAN1-217ENST00000629089 PPLO60437 1756 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms