RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
PFDN5-220ENST00000628881 PTPRKQ15262 1439 aa20.91■□□□□ 0.94
PFDN5-220ENST00000628881 C3P01024 1663 aa20.9■□□□□ 0.94
PFDN5-220ENST00000628881 CLTCQ00610 1675 aaKnown RBP20.9■□□□□ 0.94
PFDN5-220ENST00000628881 FAM135AQ9P2D6 1515 aa20.9■□□□□ 0.94
PFDN5-220ENST00000628881 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
PFDN5-220ENST00000628881 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
PFDN5-220ENST00000628881 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
PFDN5-220ENST00000628881 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
PFDN5-220ENST00000628881 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
PFDN5-220ENST00000628881 MROH1Q8NDA8 1641 aa20.85■□□□□ 0.93
PFDN5-220ENST00000628881 ITGAEP38570 1179 aa20.83■□□□□ 0.93
PFDN5-220ENST00000628881 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.92
PFDN5-220ENST00000628881 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
PFDN5-220ENST00000628881 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
PFDN5-220ENST00000628881 WASHC2CQ9Y4E1 1318 aa20.81■□□□□ 0.92
PFDN5-220ENST00000628881 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
PFDN5-220ENST00000628881 ABCC3O15438 1527 aa20.8■□□□□ 0.92
PFDN5-220ENST00000628881 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
PFDN5-220ENST00000628881 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
PFDN5-220ENST00000628881 NPATQ14207 1427 aa20.79■□□□□ 0.92
PFDN5-220ENST00000628881 SETD1BQ9UPS6 1966 aaKnown RBP20.78■□□□□ 0.92
PFDN5-220ENST00000628881 PZPP20742 1482 aa20.76■□□□□ 0.91
PFDN5-220ENST00000628881 CEP152O94986 1710 aa20.76■□□□□ 0.91
PFDN5-220ENST00000628881 UHRF1BP1Q6BDS2 1440 aa20.75■□□□□ 0.91
PFDN5-220ENST00000628881 KANK1Q14678 1352 aa20.74■□□□□ 0.91
PFDN5-220ENST00000628881 CAMSAP1Q5T5Y3 1602 aa20.74■□□□□ 0.91
PFDN5-220ENST00000628881 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
PFDN5-220ENST00000628881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.914e-10■■□□□ 12.1
PFDN5-220ENST00000628881 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
PFDN5-220ENST00000628881 UNC13BO14795 1591 aa20.71■□□□□ 0.91
PFDN5-220ENST00000628881 MYO3AQ8NEV4 1616 aa20.69■□□□□ 0.9
PFDN5-220ENST00000628881 GCC2Q8IWJ2 1684 aa20.69■□□□□ 0.9
PFDN5-220ENST00000628881 NAIPQ13075 1403 aa20.68■□□□□ 0.9
PFDN5-220ENST00000628881 ARHGAP31Q2M1Z3 1444 aa20.68■□□□□ 0.9
PFDN5-220ENST00000628881 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
PFDN5-220ENST00000628881 HSPA2P54652 639 aa20.66■□□□□ 0.9
PFDN5-220ENST00000628881 TNRQ92752 1358 aa20.66■□□□□ 0.9
PFDN5-220ENST00000628881 ZNF142P52746 1687 aaPredicted RBP20.66■□□□□ 0.9
PFDN5-220ENST00000628881 SPATA31D1Q6ZQQ2 1576 aa20.65■□□□□ 0.9
PFDN5-220ENST00000628881 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
PFDN5-220ENST00000628881 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
PFDN5-220ENST00000628881 EFCAB6Q5THR3 1501 aa20.64■□□□□ 0.9
PFDN5-220ENST00000628881 CEP170BQ9Y4F5 1589 aaPredicted RBP20.63■□□□□ 0.89
PFDN5-220ENST00000628881 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
PFDN5-220ENST00000628881 TET3O43151 1660 aa20.61■□□□□ 0.89
PFDN5-220ENST00000628881 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
PFDN5-220ENST00000628881 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
PFDN5-220ENST00000628881 CFAP65Q6ZU64 1925 aaKnown RBP20.59■□□□□ 0.89
PFDN5-220ENST00000628881 NUP155O75694 1391 aa20.59■□□□□ 0.89
PFDN5-220ENST00000628881 RPRD2Q5VT52 1461 aaKnown RBP20.58■□□□□ 0.89
PFDN5-220ENST00000628881 STRCQ7RTU9 1775 aa20.54■□□□□ 0.88
PFDN5-220ENST00000628881 NOS1P29475 1434 aa20.53■□□□□ 0.88
PFDN5-220ENST00000628881 E9PCH4 1651 aa20.53■□□□□ 0.88
PFDN5-220ENST00000628881 UGGT1Q9NYU2 1555 aa20.52■□□□□ 0.88
PFDN5-220ENST00000628881 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
PFDN5-220ENST00000628881 SYNMO15061 1565 aa20.51■□□□□ 0.87
PFDN5-220ENST00000628881 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
PFDN5-220ENST00000628881 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
PFDN5-220ENST00000628881 PIK3C2BO00750 1634 aa20.46■□□□□ 0.87
PFDN5-220ENST00000628881 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
PFDN5-220ENST00000628881 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
PFDN5-220ENST00000628881 SLC52A1Q9NWF4 448 aa20.45■□□□□ 0.86
PFDN5-220ENST00000628881 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
PFDN5-220ENST00000628881 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.86
PFDN5-220ENST00000628881 PKD2Q13563 968 aa20.44■□□□□ 0.86
PFDN5-220ENST00000628881 PTPRTO14522 1441 aa20.44■□□□□ 0.86
PFDN5-220ENST00000628881 IDI1Q13907 227 aa20.43■□□□□ 0.86
PFDN5-220ENST00000628881 POLR1AO95602 1720 aaPredicted RBP20.43■□□□□ 0.86
PFDN5-220ENST00000628881 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
PFDN5-220ENST00000628881 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
PFDN5-220ENST00000628881 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
PFDN5-220ENST00000628881 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
PFDN5-220ENST00000628881 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
PFDN5-220ENST00000628881 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
PFDN5-220ENST00000628881 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
PFDN5-220ENST00000628881 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
PFDN5-220ENST00000628881 SLIT1O75093 1534 aa20.38■□□□□ 0.85
PFDN5-220ENST00000628881 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
PFDN5-220ENST00000628881 ANKLE2Q86XL3 938 aa20.38■□□□□ 0.85
PFDN5-220ENST00000628881 TRPM2O94759 1503 aa20.35■□□□□ 0.85
PFDN5-220ENST00000628881 MED14O60244 1454 aa20.35■□□□□ 0.85
PFDN5-220ENST00000628881 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
PFDN5-220ENST00000628881 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
PFDN5-220ENST00000628881 SCAF11Q99590 1463 aaKnown RBP20.33■□□□□ 0.85
PFDN5-220ENST00000628881 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
PFDN5-220ENST00000628881 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
PFDN5-220ENST00000628881 NPHP4O75161 1426 aaPredicted RBP20.31■□□□□ 0.84
PFDN5-220ENST00000628881 CLTCL1P53675 1640 aa20.31■□□□□ 0.84
PFDN5-220ENST00000628881 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
PFDN5-220ENST00000628881 HRCP23327 699 aa20.3■□□□□ 0.84
PFDN5-220ENST00000628881 TXNDC2Q86VQ3 553 aa20.3■□□□□ 0.84
PFDN5-220ENST00000628881 EID1Q9Y6B2 187 aa20.3■□□□□ 0.84
PFDN5-220ENST00000628881 LTKP29376 864 aa20.29■□□□□ 0.84
PFDN5-220ENST00000628881 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
PFDN5-220ENST00000628881 ZFYVE9O95405 1425 aa20.27■□□□□ 0.83
PFDN5-220ENST00000628881 FOXD1Q16676 465 aa20.26■□□□□ 0.83
PFDN5-220ENST00000628881 RIMS2Q9UQ26 1411 aa20.25■□□□□ 0.83
PFDN5-220ENST00000628881 KIF1BO60333 1816 aa20.24■□□□□ 0.83
PFDN5-220ENST00000628881 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms