RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 FBXO31Q5XUX0 539 aaPredicted RBP12.17□□□□□ -0.46
TCF4-266ENST00000628689 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
TCF4-266ENST00000628689 SYNMO15061 1565 aa12.16□□□□□ -0.46
TCF4-266ENST00000628689 CDC42BPBQ9Y5S2 1711 aa12.16□□□□□ -0.46
TCF4-266ENST00000628689 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
TCF4-266ENST00000628689 ABCC1P33527 1531 aa12.15□□□□□ -0.46
TCF4-266ENST00000628689 TNRQ92752 1358 aa12.15□□□□□ -0.46
TCF4-266ENST00000628689 DEPDC5O75140 1603 aa12.15□□□□□ -0.47
TCF4-266ENST00000628689 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
TCF4-266ENST00000628689 IQGAP1P46940 1657 aa12.14□□□□□ -0.47
TCF4-266ENST00000628689 RXRBP28702 533 aa12.14□□□□□ -0.47
TCF4-266ENST00000628689 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
TCF4-266ENST00000628689 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
TCF4-266ENST00000628689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
TCF4-266ENST00000628689 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
TCF4-266ENST00000628689 JCADQ9P266 1359 aa12.11□□□□□ -0.47
TCF4-266ENST00000628689 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
TCF4-266ENST00000628689 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
TCF4-266ENST00000628689 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
TCF4-266ENST00000628689 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
TCF4-266ENST00000628689 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
TCF4-266ENST00000628689 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
TCF4-266ENST00000628689 A2MP01023 1474 aa12.09□□□□□ -0.47
TCF4-266ENST00000628689 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
TCF4-266ENST00000628689 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
TCF4-266ENST00000628689 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
TCF4-266ENST00000628689 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
TCF4-266ENST00000628689 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
TCF4-266ENST00000628689 LRP6O75581 1613 aa12.08□□□□□ -0.48
TCF4-266ENST00000628689 ZBTB22O15209 634 aa12.07□□□□□ -0.48
TCF4-266ENST00000628689 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
TCF4-266ENST00000628689 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
TCF4-266ENST00000628689 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
TCF4-266ENST00000628689 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
TCF4-266ENST00000628689 PREX2Q70Z35 1606 aa12.05□□□□□ -0.48
TCF4-266ENST00000628689 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
TCF4-266ENST00000628689 NLRP1Q9C000 1473 aa12.05□□□□□ -0.48
TCF4-266ENST00000628689 ZC3H13Q5T200 1668 aaKnown RBP12.05□□□□□ -0.48
TCF4-266ENST00000628689 CLIP1P30622 1438 aa12.04□□□□□ -0.48
TCF4-266ENST00000628689 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
TCF4-266ENST00000628689 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 PZPP20742 1482 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
TCF4-266ENST00000628689 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
TCF4-266ENST00000628689 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
TCF4-266ENST00000628689 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
TCF4-266ENST00000628689 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
TCF4-266ENST00000628689 SLAIN2Q9P270 581 aa12□□□□□ -0.49
TCF4-266ENST00000628689 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
TCF4-266ENST00000628689 LTKP29376 864 aa11.99□□□□□ -0.49
TCF4-266ENST00000628689 RGS12O14924 1447 aa11.99□□□□□ -0.49
TCF4-266ENST00000628689 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
TCF4-266ENST00000628689 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
TCF4-266ENST00000628689 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
TCF4-266ENST00000628689 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
TCF4-266ENST00000628689 FGD6Q6ZV73 1430 aa11.97□□□□□ -0.49
TCF4-266ENST00000628689 AFF2P51816 1311 aa11.97□□□□□ -0.49
TCF4-266ENST00000628689 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
TCF4-266ENST00000628689 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
TCF4-266ENST00000628689 TXNDC2Q86VQ3 553 aa11.97□□□□□ -0.49
TCF4-266ENST00000628689 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
TCF4-266ENST00000628689 MAP3K1Q13233 1512 aa11.96□□□□□ -0.49
TCF4-266ENST00000628689 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
TCF4-266ENST00000628689 KIF3BO15066 747 aa11.96□□□□□ -0.49
TCF4-266ENST00000628689 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
TCF4-266ENST00000628689 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
TCF4-266ENST00000628689 ADGBQ8N7X0 1667 aa11.95□□□□□ -0.5
TCF4-266ENST00000628689 KCNA6P17658 529 aa11.95□□□□□ -0.5
TCF4-266ENST00000628689 QTRT2Q9H974 415 aaKnown RBP11.95□□□□□ -0.5
TCF4-266ENST00000628689 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
TCF4-266ENST00000628689 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
TCF4-266ENST00000628689 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
TCF4-266ENST00000628689 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
TCF4-266ENST00000628689 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
TCF4-266ENST00000628689 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
TCF4-266ENST00000628689 MSH6P52701 1360 aa11.91□□□□□ -0.5
TCF4-266ENST00000628689 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
TCF4-266ENST00000628689 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.5
TCF4-266ENST00000628689 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.5
TCF4-266ENST00000628689 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
TCF4-266ENST00000628689 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
TCF4-266ENST00000628689 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
TCF4-266ENST00000628689 UBR1Q8IWV7 1749 aa11.89□□□□□ -0.51
TCF4-266ENST00000628689 PRDM15P57071 1507 aaPredicted RBP11.89□□□□□ -0.51
TCF4-266ENST00000628689 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
TCF4-266ENST00000628689 EID1Q9Y6B2 187 aa11.88□□□□□ -0.51
TCF4-266ENST00000628689 EP400Q96L91 3159 aa11.88□□□□□ -0.51
TCF4-266ENST00000628689 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
TCF4-266ENST00000628689 SLIT1O75093 1534 aa11.87□□□□□ -0.51
TCF4-266ENST00000628689 LRP5O75197 1615 aa11.87□□□□□ -0.51
TCF4-266ENST00000628689 NGLY1Q96IV0 654 aa11.87□□□□□ -0.51
TCF4-266ENST00000628689 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
TCF4-266ENST00000628689 CFDP1Q9UEE9 299 aaPredicted RBP11.87□□□□□ -0.51
TCF4-266ENST00000628689 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
TCF4-266ENST00000628689 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
TCF4-266ENST00000628689 RTEL1-TNFRSF6BF6WH68 1400 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms