RNA–Protein interactions for RNA: ENST00000628157.1

SKIV2L-216, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5 BASIC

Gene SKIV2L, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-216ENST00000628157 THEMISQ8N1K5 641 aaPredicted RBP12.25□□□□□ -0.45
SKIV2L-216ENST00000628157 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
SKIV2L-216ENST00000628157 STRCP1A6NGW2 1772 aa12.23□□□□□ -0.45
SKIV2L-216ENST00000628157 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
SKIV2L-216ENST00000628157 SYNMO15061 1565 aa12.22□□□□□ -0.45
SKIV2L-216ENST00000628157 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
SKIV2L-216ENST00000628157 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
SKIV2L-216ENST00000628157 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
SKIV2L-216ENST00000628157 MEX3CQ5U5Q3 659 aaKnown RBP12.21□□□□□ -0.45
SKIV2L-216ENST00000628157 MED14O60244 1454 aa12.2□□□□□ -0.46
SKIV2L-216ENST00000628157 INO80Q9ULG1 1556 aaPredicted RBP12.18□□□□□ -0.46
SKIV2L-216ENST00000628157 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
SKIV2L-216ENST00000628157 CDC42BPAQ5VT25 1732 aa12.18□□□□□ -0.46
SKIV2L-216ENST00000628157 KIF3BO15066 747 aa12.18□□□□□ -0.46
SKIV2L-216ENST00000628157 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
SKIV2L-216ENST00000628157 PZPP20742 1482 aa12.17□□□□□ -0.46
SKIV2L-216ENST00000628157 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
SKIV2L-216ENST00000628157 DEPDC5O75140 1603 aa12.17□□□□□ -0.46
SKIV2L-216ENST00000628157 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
SKIV2L-216ENST00000628157 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
SKIV2L-216ENST00000628157 NLRP1Q9C000 1473 aa12.16□□□□□ -0.46
SKIV2L-216ENST00000628157 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
SKIV2L-216ENST00000628157 FAM135BQ49AJ0 1406 aa12.16□□□□□ -0.46
SKIV2L-216ENST00000628157 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
SKIV2L-216ENST00000628157 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
SKIV2L-216ENST00000628157 ZNF772Q68DY9 489 aaPredicted RBP12.13□□□□□ -0.47
SKIV2L-216ENST00000628157 TMEM94Q12767 1356 aa12.13□□□□□ -0.47
SKIV2L-216ENST00000628157 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
SKIV2L-216ENST00000628157 EEA1Q15075 1411 aa12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 GPATCH8Q9UKJ3 1502 aaKnown RBP12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 JCADQ9P266 1359 aa12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 CCDC18Q5T9S5 1454 aa12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
SKIV2L-216ENST00000628157 CCNB3Q8WWL7 1395 aa12.11□□□□□ -0.47
SKIV2L-216ENST00000628157 RXRBP28702 533 aa12.11□□□□□ -0.47
SKIV2L-216ENST00000628157 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
SKIV2L-216ENST00000628157 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
SKIV2L-216ENST00000628157 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-216ENST00000628157 DHX29Q7Z478 1369 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-216ENST00000628157 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
SKIV2L-216ENST00000628157 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
SKIV2L-216ENST00000628157 LRP6O75581 1613 aa12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 LTKP29376 864 aa12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 XIRP1Q702N8 1843 aaKnown RBP12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
SKIV2L-216ENST00000628157 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
SKIV2L-216ENST00000628157 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
SKIV2L-216ENST00000628157 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
SKIV2L-216ENST00000628157 BCANQ96GW7 911 aa12.04□□□□□ -0.48
SKIV2L-216ENST00000628157 MSH6P52701 1360 aa12.04□□□□□ -0.48
SKIV2L-216ENST00000628157 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
SKIV2L-216ENST00000628157 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
SKIV2L-216ENST00000628157 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
SKIV2L-216ENST00000628157 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
SKIV2L-216ENST00000628157 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
SKIV2L-216ENST00000628157 ERVK-7P63135 1459 aa12.02□□□□□ -0.48
SKIV2L-216ENST00000628157 MAP3K1Q13233 1512 aa12.02□□□□□ -0.48
SKIV2L-216ENST00000628157 KCNA6P17658 529 aa12.01□□□□□ -0.49
SKIV2L-216ENST00000628157 AFF2P51816 1311 aa12.01□□□□□ -0.49
SKIV2L-216ENST00000628157 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
SKIV2L-216ENST00000628157 NCOA2Q15596 1464 aa12.01□□□□□ -0.49
SKIV2L-216ENST00000628157 C14orf37Q86TY3 774 aa12□□□□□ -0.49
SKIV2L-216ENST00000628157 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
SKIV2L-216ENST00000628157 RGS12O14924 1447 aa12□□□□□ -0.49
SKIV2L-216ENST00000628157 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
SKIV2L-216ENST00000628157 MBD5Q9P267 1494 aa11.99□□□□□ -0.49
SKIV2L-216ENST00000628157 SETBP1Q9Y6X0 1596 aa11.99□□□□□ -0.49
SKIV2L-216ENST00000628157 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
SKIV2L-216ENST00000628157 ABCC3O15438 1527 aa11.98□□□□□ -0.49
SKIV2L-216ENST00000628157 FOXD1Q16676 465 aa11.98□□□□□ -0.49
SKIV2L-216ENST00000628157 CCDC141Q6ZP82 1450 aa11.97□□□□□ -0.49
SKIV2L-216ENST00000628157 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
SKIV2L-216ENST00000628157 CDK12Q9NYV4 1490 aaPredicted RBP11.97□□□□□ -0.49
SKIV2L-216ENST00000628157 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
SKIV2L-216ENST00000628157 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.49
SKIV2L-216ENST00000628157 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
SKIV2L-216ENST00000628157 TIAM1Q13009 1591 aa11.96□□□□□ -0.5
SKIV2L-216ENST00000628157 SLIT1O75093 1534 aa11.96□□□□□ -0.5
SKIV2L-216ENST00000628157 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
SKIV2L-216ENST00000628157 QTRT2Q9H974 415 aaKnown RBP11.95□□□□□ -0.5
SKIV2L-216ENST00000628157 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
SKIV2L-216ENST00000628157 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
SKIV2L-216ENST00000628157 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
SKIV2L-216ENST00000628157 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
SKIV2L-216ENST00000628157 NKTRP30414 1462 aaKnown RBP11.92□□□□□ -0.5
SKIV2L-216ENST00000628157 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
SKIV2L-216ENST00000628157 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
SKIV2L-216ENST00000628157 CAMSAP2Q08AD1 1489 aa11.91□□□□□ -0.5
SKIV2L-216ENST00000628157 CEP152O94986 1710 aa11.91□□□□□ -0.5
SKIV2L-216ENST00000628157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.53e-8■■■□□ 15.9
SKIV2L-216ENST00000628157 SHPRHQ149N8 1683 aa11.9□□□□□ -0.5
SKIV2L-216ENST00000628157 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
SKIV2L-216ENST00000628157 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
SKIV2L-216ENST00000628157 ATF3P18847 181 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms