RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 JPH4Q96JJ6 628 aa16.02■□□□□ 0.15
SCN8A-209ENST00000627620 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
SCN8A-209ENST00000627620 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
SCN8A-209ENST00000627620 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
SCN8A-209ENST00000627620 KIAA2012Q0VF49 1180 aa16■□□□□ 0.15
SCN8A-209ENST00000627620 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
SCN8A-209ENST00000627620 PHLDB1Q86UU1 1377 aa15.99■□□□□ 0.15
SCN8A-209ENST00000627620 KIF15Q9NS87 1388 aa15.99■□□□□ 0.15
SCN8A-209ENST00000627620 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
SCN8A-209ENST00000627620 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
SCN8A-209ENST00000627620 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
SCN8A-209ENST00000627620 PANK3Q9H999 370 aa15.98■□□□□ 0.15
SCN8A-209ENST00000627620 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
SCN8A-209ENST00000627620 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
SCN8A-209ENST00000627620 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
SCN8A-209ENST00000627620 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.14
SCN8A-209ENST00000627620 TPM4P67936 248 aa15.95■□□□□ 0.14
SCN8A-209ENST00000627620 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
SCN8A-209ENST00000627620 WIZO95785 1651 aa15.94■□□□□ 0.14
SCN8A-209ENST00000627620 CCDC34Q96HJ3 373 aa15.94■□□□□ 0.14
SCN8A-209ENST00000627620 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
SCN8A-209ENST00000627620 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 G3V3G9 751 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 GTF2E1P29083 439 aaPredicted RBP15.92■□□□□ 0.14
SCN8A-209ENST00000627620 COG3Q96JB2 828 aa15.92■□□□□ 0.14
SCN8A-209ENST00000627620 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
SCN8A-209ENST00000627620 ST18O60284 1047 aa15.91■□□□□ 0.14
SCN8A-209ENST00000627620 VGFO15240 615 aaPredicted RBP15.91■□□□□ 0.14
SCN8A-209ENST00000627620 FRAT2O75474 233 aaPredicted RBP15.91■□□□□ 0.14
SCN8A-209ENST00000627620 RASSF8Q8NHQ8 419 aa15.91■□□□□ 0.14
SCN8A-209ENST00000627620 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
SCN8A-209ENST00000627620 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
SCN8A-209ENST00000627620 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
SCN8A-209ENST00000627620 EVC2Q86UK5 1308 aa15.89■□□□□ 0.14
SCN8A-209ENST00000627620 KIF16BQ96L93 1317 aa15.89■□□□□ 0.13
SCN8A-209ENST00000627620 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
SCN8A-209ENST00000627620 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
SCN8A-209ENST00000627620 E9PSI1 815 aa15.87■□□□□ 0.13
SCN8A-209ENST00000627620 NOC3LQ8WTT2 800 aaKnown RBP15.87■□□□□ 0.13
SCN8A-209ENST00000627620 ANKRD45Q5TZF3 282 aa15.87■□□□□ 0.13
SCN8A-209ENST00000627620 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
SCN8A-209ENST00000627620 RILPL2Q969X0 211 aa15.87■□□□□ 0.13
SCN8A-209ENST00000627620 PLIN1O60240 522 aa15.86■□□□□ 0.13
SCN8A-209ENST00000627620 FOXD4L5Q5VV16 416 aaPredicted RBP15.86■□□□□ 0.13
SCN8A-209ENST00000627620 FOXD4L4Q8WXT5 416 aaPredicted RBP15.86■□□□□ 0.13
SCN8A-209ENST00000627620 CENPQQ7L2Z9 268 aaPredicted RBP15.86■□□□□ 0.13
SCN8A-209ENST00000627620 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
SCN8A-209ENST00000627620 PTPRGP23470 1445 aa15.86■□□□□ 0.13
SCN8A-209ENST00000627620 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
SCN8A-209ENST00000627620 KIF3AQ9Y496 699 aa15.86■□□□□ 0.13
SCN8A-209ENST00000627620 CREBRFQ8IUR6 639 aa15.85■□□□□ 0.13
SCN8A-209ENST00000627620 USP47Q96K76 1375 aa15.85■□□□□ 0.13
SCN8A-209ENST00000627620 TEFQ10587 303 aa15.84■□□□□ 0.13
SCN8A-209ENST00000627620 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
SCN8A-209ENST00000627620 ARID3AQ99856 593 aa15.83■□□□□ 0.12
SCN8A-209ENST00000627620 AMER1Q5JTC6 1135 aaPredicted RBP15.83■□□□□ 0.12
SCN8A-209ENST00000627620 PHF14O94880 888 aa15.82■□□□□ 0.12
SCN8A-209ENST00000627620 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
SCN8A-209ENST00000627620 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 EVA1CP58658 441 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 COG6Q9Y2V7 657 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 APAF1O14727 1248 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 MARCH6O60337 910 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 H3BQV1 296 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 IFFO2Q5TF58 517 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 CRBNQ96SW2 442 aa15.81■□□□□ 0.12
SCN8A-209ENST00000627620 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
SCN8A-209ENST00000627620 PDE4AP27815 886 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 VPS53Q5VIR6 699 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 DDX11L8A8MPP1 907 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
SCN8A-209ENST00000627620 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 ZBED9Q6R2W3 1325 aa15.79■□□□□ 0.12
SCN8A-209ENST00000627620 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
SCN8A-209ENST00000627620 C9orf78Q9NZ63 289 aaPredicted RBP15.77■□□□□ 0.12
SCN8A-209ENST00000627620 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.12
SCN8A-209ENST00000627620 PDE4CQ08493 712 aa15.76■□□□□ 0.11
SCN8A-209ENST00000627620 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
SCN8A-209ENST00000627620 RIPK4P57078 832 aa15.76■□□□□ 0.11
SCN8A-209ENST00000627620 CHMP4CQ96CF2 233 aa15.76■□□□□ 0.11
SCN8A-209ENST00000627620 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
SCN8A-209ENST00000627620 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
SCN8A-209ENST00000627620 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
SCN8A-209ENST00000627620 ATP6V1DQ9Y5K8 247 aa15.75■□□□□ 0.11
SCN8A-209ENST00000627620 FOXD4L6Q3SYB3 417 aaPredicted RBP15.75■□□□□ 0.11
SCN8A-209ENST00000627620 FOXD4L3Q6VB84 417 aaPredicted RBP15.75■□□□□ 0.11
SCN8A-209ENST00000627620 TPM3P06753 285 aa15.74■□□□□ 0.11
SCN8A-209ENST00000627620 DDX49Q9Y6V7 483 aaKnown RBP15.74■□□□□ 0.11
SCN8A-209ENST00000627620 PES1O00541 588 aaKnown RBP15.73■□□□□ 0.11
SCN8A-209ENST00000627620 LRRFIP1Q32MZ4 808 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms