RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
CBWD3-219ENST00000622817 AFAP1Q8N556 730 aa10.24□□□□□ -0.77
CBWD3-219ENST00000622817 PLXNC1O60486 1568 aa10.24□□□□□ -0.77
CBWD3-219ENST00000622817 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
CBWD3-219ENST00000622817 ATF5Q9Y2D1 282 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-219ENST00000622817 DUOX2Q9NRD8 1548 aa10.22□□□□□ -0.77
CBWD3-219ENST00000622817 ZNF518AQ6AHZ1 1483 aa10.22□□□□□ -0.77
CBWD3-219ENST00000622817 MPHOSPH9Q99550 1183 aa10.21□□□□□ -0.78
CBWD3-219ENST00000622817 ZFYVE16Q7Z3T8 1539 aa10.21□□□□□ -0.78
CBWD3-219ENST00000622817 POGZQ7Z3K3 1410 aa10.2□□□□□ -0.78
CBWD3-219ENST00000622817 INO80Q9ULG1 1556 aaPredicted RBP10.19□□□□□ -0.78
CBWD3-219ENST00000622817 ATP7AQ04656 1500 aa10.19□□□□□ -0.78
CBWD3-219ENST00000622817 DENND4BO75064 1496 aaPredicted RBP10.19□□□□□ -0.78
CBWD3-219ENST00000622817 TEX14Q8IWB6 1497 aa10.19□□□□□ -0.78
CBWD3-219ENST00000622817 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
CBWD3-219ENST00000622817 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
CBWD3-219ENST00000622817 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
CBWD3-219ENST00000622817 KDM5CP41229 1560 aa10.18□□□□□ -0.78
CBWD3-219ENST00000622817 NUP155O75694 1391 aa10.18□□□□□ -0.78
CBWD3-219ENST00000622817 PZPP20742 1482 aa10.17□□□□□ -0.78
CBWD3-219ENST00000622817 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
CBWD3-219ENST00000622817 MLH3Q9UHC1 1453 aa10.17□□□□□ -0.78
CBWD3-219ENST00000622817 TIMELESSQ9UNS1 1208 aa10.17□□□□□ -0.78
CBWD3-219ENST00000622817 SIN3AQ96ST3 1273 aa10.15□□□□□ -0.78
CBWD3-219ENST00000622817 KIF13AQ9H1H9 1805 aa10.15□□□□□ -0.78
CBWD3-219ENST00000622817 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.78
CBWD3-219ENST00000622817 PPRC1Q5VV67 1664 aaKnown RBP10.15□□□□□ -0.78
CBWD3-219ENST00000622817 RAPGEF3O95398 923 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 NEUROD1Q13562 356 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 POLA2Q14181 598 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 UNC13BO14795 1591 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 KIDINS220Q9ULH0 1771 aa10.15□□□□□ -0.79
CBWD3-219ENST00000622817 TSPOAP1O95153 1857 aa10.14□□□□□ -0.79
CBWD3-219ENST00000622817 ANKRD30BQ9BXX2 1392 aa10.13□□□□□ -0.79
CBWD3-219ENST00000622817 PKD2Q13563 968 aa10.13□□□□□ -0.79
CBWD3-219ENST00000622817 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
CBWD3-219ENST00000622817 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
CBWD3-219ENST00000622817 A2MP01023 1474 aa10.12□□□□□ -0.79
CBWD3-219ENST00000622817 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
CBWD3-219ENST00000622817 EIF2AK4Q9P2K8 1649 aaKnown RBP10.12□□□□□ -0.79
CBWD3-219ENST00000622817 ATXN8OSP0DMR3 200 aa10.11□□□□□ -0.79
CBWD3-219ENST00000622817 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
CBWD3-219ENST00000622817 IQGAP3Q86VI3 1631 aa10.11□□□□□ -0.79
CBWD3-219ENST00000622817 ZMYM4Q5VZL5 1548 aa10.1□□□□□ -0.79
CBWD3-219ENST00000622817 KANK1Q14678 1352 aa10.1□□□□□ -0.79
CBWD3-219ENST00000622817 KIF3BO15066 747 aa10.1□□□□□ -0.79
CBWD3-219ENST00000622817 FRMPD1Q5SYB0 1578 aa10.1□□□□□ -0.79
CBWD3-219ENST00000622817 DEPDC5O75140 1603 aa10.09□□□□□ -0.79
CBWD3-219ENST00000622817 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
CBWD3-219ENST00000622817 DIP2CQ9Y2E4 1556 aa10.08□□□□□ -0.8
CBWD3-219ENST00000622817 RPRD2Q5VT52 1461 aaKnown RBP10.07□□□□□ -0.8
CBWD3-219ENST00000622817 PPP1R15AO75807 674 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-219ENST00000622817 YEATS2Q9ULM3 1422 aa10.06□□□□□ -0.8
CBWD3-219ENST00000622817 PRDM15P57071 1507 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-219ENST00000622817 VWDEQ8N2E2 1590 aa10.06□□□□□ -0.8
CBWD3-219ENST00000622817 BCORL1Q5H9F3 1711 aa10.06□□□□□ -0.8
CBWD3-219ENST00000622817 RNF17Q9BXT8 1623 aaKnown RBP10.06□□□□□ -0.8
CBWD3-219ENST00000622817 ATP10AO60312 1499 aa10.05□□□□□ -0.8
CBWD3-219ENST00000622817 MROH1Q8NDA8 1641 aa10.05□□□□□ -0.8
CBWD3-219ENST00000622817 COL17A1Q9UMD9 1497 aaPredicted RBP10.05□□□□□ -0.8
CBWD3-219ENST00000622817 TET3O43151 1660 aa10.04□□□□□ -0.8
CBWD3-219ENST00000622817 LMTK2Q8IWU2 1503 aa10.03□□□□□ -0.8
CBWD3-219ENST00000622817 REREQ9P2R6 1566 aa10.02□□□□□ -0.8
CBWD3-219ENST00000622817 GGT6Q6P531 493 aa10.02□□□□□ -0.8
CBWD3-219ENST00000622817 L3MBTL2Q969R5 705 aa10.02□□□□□ -0.8
CBWD3-219ENST00000622817 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
CBWD3-219ENST00000622817 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
CBWD3-219ENST00000622817 ZNF316A6NFI3 1004 aaPredicted RBP10.02□□□□□ -0.81
CBWD3-219ENST00000622817 AGLP35573 1532 aa10.01□□□□□ -0.81
CBWD3-219ENST00000622817 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
CBWD3-219ENST00000622817 E9PCH4 1651 aa10.01□□□□□ -0.81
CBWD3-219ENST00000622817 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
CBWD3-219ENST00000622817 PTPRTO14522 1441 aa10□□□□□ -0.81
CBWD3-219ENST00000622817 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
CBWD3-219ENST00000622817 ABCC3O15438 1527 aa9.99□□□□□ -0.81
CBWD3-219ENST00000622817 TRPM2O94759 1503 aa9.98□□□□□ -0.81
CBWD3-219ENST00000622817 CEP152O94986 1710 aa9.98□□□□□ -0.81
CBWD3-219ENST00000622817 SPHKAPQ2M3C7 1700 aa9.97□□□□□ -0.81
CBWD3-219ENST00000622817 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.81
CBWD3-219ENST00000622817 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
CBWD3-219ENST00000622817 NPATQ14207 1427 aa9.95□□□□□ -0.82
CBWD3-219ENST00000622817 ARHGAP31Q2M1Z3 1444 aa9.95□□□□□ -0.82
CBWD3-219ENST00000622817 CAMSAP1Q5T5Y3 1602 aa9.95□□□□□ -0.82
CBWD3-219ENST00000622817 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
CBWD3-219ENST00000622817 UHRF1BP1Q6BDS2 1440 aa9.94□□□□□ -0.82
CBWD3-219ENST00000622817 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
CBWD3-219ENST00000622817 DCAF11Q8TEB1 546 aa9.93□□□□□ -0.82
CBWD3-219ENST00000622817 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
CBWD3-219ENST00000622817 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
CBWD3-219ENST00000622817 RGL3Q3MIN7 710 aa9.93□□□□□ -0.82
CBWD3-219ENST00000622817 CLTCL1P53675 1640 aa9.92□□□□□ -0.82
CBWD3-219ENST00000622817 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
CBWD3-219ENST00000622817 ARID4BQ4LE39 1312 aaPredicted RBP9.92□□□□□ -0.82
CBWD3-219ENST00000622817 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
CBWD3-219ENST00000622817 NOS1P29475 1434 aa9.92□□□□□ -0.82
CBWD3-219ENST00000622817 SIGLEC1Q9BZZ2 1709 aa9.92□□□□□ -0.82
CBWD3-219ENST00000622817 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
CBWD3-219ENST00000622817 MLECQ14165 292 aa9.91□□□□□ -0.82
CBWD3-219ENST00000622817 ZNF326Q5BKZ1 582 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms