RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
SLC6A6-209ENST00000622176 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
SLC6A6-209ENST00000622176 RNF17Q9BXT8 1623 aaKnown RBP26.28■■□□□ 1.8
SLC6A6-209ENST00000622176 PTPRMP28827 1452 aa26.27■■□□□ 1.8
SLC6A6-209ENST00000622176 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
SLC6A6-209ENST00000622176 MROH1Q8NDA8 1641 aa26.23■■□□□ 1.79
SLC6A6-209ENST00000622176 DEPDC5O75140 1603 aa26.22■■□□□ 1.79
SLC6A6-209ENST00000622176 FER1L4A9Z1Z3 1794 aa26.22■■□□□ 1.79
SLC6A6-209ENST00000622176 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
SLC6A6-209ENST00000622176 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
SLC6A6-209ENST00000622176 PRDM15P57071 1507 aaPredicted RBP26.2■■□□□ 1.79
SLC6A6-209ENST00000622176 ESF1Q9H501 851 aaKnown RBP26.2■■□□□ 1.78
SLC6A6-209ENST00000622176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.785e-6■□□□□ 10.5
SLC6A6-209ENST00000622176 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
SLC6A6-209ENST00000622176 KDM5DQ9BY66 1539 aa26.18■■□□□ 1.78
SLC6A6-209ENST00000622176 WASHC2CQ9Y4E1 1318 aa26.17■■□□□ 1.78
SLC6A6-209ENST00000622176 KANK1Q14678 1352 aa26.16■■□□□ 1.78
SLC6A6-209ENST00000622176 UNC13BO14795 1591 aa26.16■■□□□ 1.78
SLC6A6-209ENST00000622176 VWDEQ8N2E2 1590 aa26.15■■□□□ 1.78
SLC6A6-209ENST00000622176 ABCC3O15438 1527 aa26.14■■□□□ 1.78
SLC6A6-209ENST00000622176 CLTCQ00610 1675 aaKnown RBP26.12■■□□□ 1.77
SLC6A6-209ENST00000622176 ZMYM3Q14202 1370 aa26.11■■□□□ 1.77
SLC6A6-209ENST00000622176 NUP155O75694 1391 aa26.1■■□□□ 1.77
SLC6A6-209ENST00000622176 LMTK2Q8IWU2 1503 aa26.1■■□□□ 1.77
SLC6A6-209ENST00000622176 ZC3H13Q5T200 1668 aaKnown RBP26.1■■□□□ 1.77
SLC6A6-209ENST00000622176 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
SLC6A6-209ENST00000622176 RAB3GAP2Q9H2M9 1393 aa26.09■■□□□ 1.77
SLC6A6-209ENST00000622176 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
SLC6A6-209ENST00000622176 HRCP23327 699 aa26.07■■□□□ 1.76
SLC6A6-209ENST00000622176 CEBPAP49715 358 aaPredicted RBP26.05■■□□□ 1.76
SLC6A6-209ENST00000622176 IQGAP3Q86VI3 1631 aa26.05■■□□□ 1.76
SLC6A6-209ENST00000622176 CEP152O94986 1710 aa26.05■■□□□ 1.76
SLC6A6-209ENST00000622176 TRIM52Q96A61 297 aa26.04■■□□□ 1.76
SLC6A6-209ENST00000622176 ARHGAP31Q2M1Z3 1444 aa26.04■■□□□ 1.76
SLC6A6-209ENST00000622176 C3P01024 1663 aa26.03■■□□□ 1.76
SLC6A6-209ENST00000622176 PZPP20742 1482 aa26.02■■□□□ 1.76
SLC6A6-209ENST00000622176 CAMSAP1Q5T5Y3 1602 aa26.02■■□□□ 1.76
SLC6A6-209ENST00000622176 LMTK3Q96Q04 1460 aa26■■□□□ 1.75
SLC6A6-209ENST00000622176 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
SLC6A6-209ENST00000622176 TET3O43151 1660 aa25.99■■□□□ 1.75
SLC6A6-209ENST00000622176 EFCAB6Q5THR3 1501 aa25.98■■□□□ 1.75
SLC6A6-209ENST00000622176 NPATQ14207 1427 aa25.98■■□□□ 1.75
SLC6A6-209ENST00000622176 FBXO31Q5XUX0 539 aaPredicted RBP25.96■■□□□ 1.75
SLC6A6-209ENST00000622176 RPRD2Q5VT52 1461 aaKnown RBP25.94■■□□□ 1.74
SLC6A6-209ENST00000622176 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
SLC6A6-209ENST00000622176 PREX1Q8TCU6 1659 aa25.93■■□□□ 1.74
SLC6A6-209ENST00000622176 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
SLC6A6-209ENST00000622176 MPHOSPH9Q99550 1183 aa25.92■■□□□ 1.74
SLC6A6-209ENST00000622176 ERVK-7P63135 1459 aa25.91■■□□□ 1.74
SLC6A6-209ENST00000622176 SETD1BQ9UPS6 1966 aaKnown RBP25.9■■□□□ 1.74
SLC6A6-209ENST00000622176 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
SLC6A6-209ENST00000622176 E9PCH4 1651 aa25.89■■□□□ 1.73
SLC6A6-209ENST00000622176 TNRQ92752 1358 aa25.88■■□□□ 1.73
SLC6A6-209ENST00000622176 PKD2Q13563 968 aa25.88■■□□□ 1.73
SLC6A6-209ENST00000622176 NOS1P29475 1434 aa25.88■■□□□ 1.73
SLC6A6-209ENST00000622176 CFAP65Q6ZU64 1925 aaKnown RBP25.84■■□□□ 1.73
SLC6A6-209ENST00000622176 PTPRTO14522 1441 aa25.82■■□□□ 1.72
SLC6A6-209ENST00000622176 UHRF1BP1Q6BDS2 1440 aa25.8■■□□□ 1.72
SLC6A6-209ENST00000622176 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
SLC6A6-209ENST00000622176 SYNMO15061 1565 aa25.79■■□□□ 1.72
SLC6A6-209ENST00000622176 HSPA2P54652 639 aa25.79■■□□□ 1.72
SLC6A6-209ENST00000622176 ILDR1Q86SU0 546 aaPredicted RBP25.78■■□□□ 1.72
SLC6A6-209ENST00000622176 FOXD1Q16676 465 aa25.77■■□□□ 1.72
SLC6A6-209ENST00000622176 SLC52A1Q9NWF4 448 aa25.77■■□□□ 1.72
SLC6A6-209ENST00000622176 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
SLC6A6-209ENST00000622176 MYO3AQ8NEV4 1616 aa25.77■■□□□ 1.72
SLC6A6-209ENST00000622176 A2ML1A8K2U0 1454 aa25.74■■□□□ 1.71
SLC6A6-209ENST00000622176 IDI1Q13907 227 aa25.74■■□□□ 1.71
SLC6A6-209ENST00000622176 SPHKAPQ2M3C7 1700 aa25.74■■□□□ 1.71
SLC6A6-209ENST00000622176 TRPM2O94759 1503 aa25.73■■□□□ 1.71
SLC6A6-209ENST00000622176 CEP170BQ9Y4F5 1589 aaPredicted RBP25.72■■□□□ 1.71
SLC6A6-209ENST00000622176 ZNF142P52746 1687 aaPredicted RBP25.7■■□□□ 1.7
SLC6A6-209ENST00000622176 PIK3C2BO00750 1634 aa25.7■■□□□ 1.7
SLC6A6-209ENST00000622176 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
SLC6A6-209ENST00000622176 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
SLC6A6-209ENST00000622176 DHX57Q6P158 1386 aaKnown RBP25.67■■□□□ 1.7
SLC6A6-209ENST00000622176 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
SLC6A6-209ENST00000622176 THEMISQ8N1K5 641 aaPredicted RBP25.64■■□□□ 1.7
SLC6A6-209ENST00000622176 CLTCL1P53675 1640 aa25.63■■□□□ 1.69
SLC6A6-209ENST00000622176 STAG3Q9UJ98 1225 aa25.62■■□□□ 1.69
SLC6A6-209ENST00000622176 ADGRB3O60242 1522 aa25.62■■□□□ 1.69
SLC6A6-209ENST00000622176 CCDC144AA2RUR9 1427 aa25.62■■□□□ 1.69
SLC6A6-209ENST00000622176 KDM5AP29375 1690 aaKnown RBP25.61■■□□□ 1.69
SLC6A6-209ENST00000622176 UBR1Q8IWV7 1749 aa25.61■■□□□ 1.69
SLC6A6-209ENST00000622176 TMEM131LA2VDJ0 1609 aa25.59■■□□□ 1.69
SLC6A6-209ENST00000622176 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
SLC6A6-209ENST00000622176 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
SLC6A6-209ENST00000622176 ARHGAP23Q9P227 1491 aa25.53■■□□□ 1.68
SLC6A6-209ENST00000622176 SLIT1O75093 1534 aa25.53■■□□□ 1.68
SLC6A6-209ENST00000622176 FBXO41Q8TF61 875 aa25.52■■□□□ 1.68
SLC6A6-209ENST00000622176 SPATA31E1Q6ZUB1 1445 aa25.51■■□□□ 1.67
SLC6A6-209ENST00000622176 KIF1BO60333 1816 aa25.51■■□□□ 1.67
SLC6A6-209ENST00000622176 MYO5BQ9ULV0 1848 aa25.49■■□□□ 1.67
SLC6A6-209ENST00000622176 NEURL4Q96JN8 1562 aa25.49■■□□□ 1.67
SLC6A6-209ENST00000622176 ANKLE2Q86XL3 938 aa25.49■■□□□ 1.67
SLC6A6-209ENST00000622176 ZFYVE9O95405 1425 aa25.47■■□□□ 1.67
SLC6A6-209ENST00000622176 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
SLC6A6-209ENST00000622176 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
SLC6A6-209ENST00000622176 NCKAP5LQ9HCH0 1330 aa25.46■■□□□ 1.67
SLC6A6-209ENST00000622176 LTKP29376 864 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms