RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
SNHG28-203ENST00000621242 HSPA1LP34931 641 aa25.17■■□□□ 1.62
SNHG28-203ENST00000621242 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
SNHG28-203ENST00000621242 TNRQ92752 1358 aa25.17■■□□□ 1.62
SNHG28-203ENST00000621242 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
SNHG28-203ENST00000621242 KIF3BO15066 747 aa25.16■■□□□ 1.62
SNHG28-203ENST00000621242 CPS1P31327 1500 aa25.15■■□□□ 1.62
SNHG28-203ENST00000621242 TOM1O60784 492 aa25.14■■□□□ 1.62
SNHG28-203ENST00000621242 SHANK2Q9UPX8 1470 aa25.14■■□□□ 1.61
SNHG28-203ENST00000621242 PZPP20742 1482 aa25.13■■□□□ 1.61
SNHG28-203ENST00000621242 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
SNHG28-203ENST00000621242 MED1Q15648 1581 aaPredicted RBP25.12■■□□□ 1.61
SNHG28-203ENST00000621242 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
SNHG28-203ENST00000621242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.1■■□□□ 1.61
SNHG28-203ENST00000621242 WASHC2CQ9Y4E1 1318 aa25.1■■□□□ 1.61
SNHG28-203ENST00000621242 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
SNHG28-203ENST00000621242 ANKLE2Q86XL3 938 aa25.09■■□□□ 1.61
SNHG28-203ENST00000621242 FAM135AQ9P2D6 1515 aa25.08■■□□□ 1.61
SNHG28-203ENST00000621242 VWDEQ8N2E2 1590 aa25.07■■□□□ 1.6
SNHG28-203ENST00000621242 THEMISQ8N1K5 641 aaPredicted RBP25.07■■□□□ 1.6
SNHG28-203ENST00000621242 MIA2Q96PC5 1412 aa25.06■■□□□ 1.6
SNHG28-203ENST00000621242 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
SNHG28-203ENST00000621242 UGGT1Q9NYU2 1555 aa25.05■■□□□ 1.6
SNHG28-203ENST00000621242 NLRP1Q9C000 1473 aa25.03■■□□□ 1.6
SNHG28-203ENST00000621242 RSPH4AQ5TD94 716 aa25.03■■□□□ 1.6
SNHG28-203ENST00000621242 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
SNHG28-203ENST00000621242 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
SNHG28-203ENST00000621242 DEPDC5O75140 1603 aa25.02■■□□□ 1.6
SNHG28-203ENST00000621242 MED14O60244 1454 aa25.02■■□□□ 1.6
SNHG28-203ENST00000621242 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
SNHG28-203ENST00000621242 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
SNHG28-203ENST00000621242 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
SNHG28-203ENST00000621242 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
SNHG28-203ENST00000621242 TSPY4P0CV99 314 aa24.96■■□□□ 1.59
SNHG28-203ENST00000621242 TSPY10P0CW01 314 aa24.96■■□□□ 1.59
SNHG28-203ENST00000621242 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
SNHG28-203ENST00000621242 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
SNHG28-203ENST00000621242 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
SNHG28-203ENST00000621242 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
SNHG28-203ENST00000621242 ABCC3O15438 1527 aa24.91■■□□□ 1.58
SNHG28-203ENST00000621242 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
SNHG28-203ENST00000621242 LRRC7Q96NW7 1537 aa24.91■■□□□ 1.58
SNHG28-203ENST00000621242 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
SNHG28-203ENST00000621242 SYNMO15061 1565 aa24.87■■□□□ 1.57
SNHG28-203ENST00000621242 CEP152O94986 1710 aa24.86■■□□□ 1.57
SNHG28-203ENST00000621242 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
SNHG28-203ENST00000621242 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
SNHG28-203ENST00000621242 EIF2AK4Q9P2K8 1649 aaKnown RBP24.85■■□□□ 1.57
SNHG28-203ENST00000621242 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.57
SNHG28-203ENST00000621242 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
SNHG28-203ENST00000621242 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
SNHG28-203ENST00000621242 SCAF11Q99590 1463 aaKnown RBP24.78■■□□□ 1.56
SNHG28-203ENST00000621242 LTKP29376 864 aa24.77■■□□□ 1.56
SNHG28-203ENST00000621242 TXNDC2Q86VQ3 553 aa24.75■■□□□ 1.55
SNHG28-203ENST00000621242 ARHGAP23Q9P227 1491 aa24.74■■□□□ 1.55
SNHG28-203ENST00000621242 SLIT1O75093 1534 aa24.73■■□□□ 1.55
SNHG28-203ENST00000621242 DUOX2Q9NRD8 1548 aa24.73■■□□□ 1.55
SNHG28-203ENST00000621242 RGS17Q9UGC6 210 aaPredicted RBP24.71■■□□□ 1.55
SNHG28-203ENST00000621242 KANK4Q5T7N3 995 aaPredicted RBP24.7■■□□□ 1.54
SNHG28-203ENST00000621242 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
SNHG28-203ENST00000621242 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
SNHG28-203ENST00000621242 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
SNHG28-203ENST00000621242 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
SNHG28-203ENST00000621242 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
SNHG28-203ENST00000621242 PRDM15P57071 1507 aaPredicted RBP24.67■■□□□ 1.54
SNHG28-203ENST00000621242 KIF15Q9NS87 1388 aa24.64■■□□□ 1.53
SNHG28-203ENST00000621242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNHG28-203ENST00000621242 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
SNHG28-203ENST00000621242 FAM135BQ49AJ0 1406 aa24.62■■□□□ 1.53
SNHG28-203ENST00000621242 RRP7BPQ9NSQ0 103 aa24.62■■□□□ 1.53
SNHG28-203ENST00000621242 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
SNHG28-203ENST00000621242 ERBINQ96RT1 1412 aa24.61■■□□□ 1.53
SNHG28-203ENST00000621242 MAP3K1Q13233 1512 aa24.61■■□□□ 1.53
SNHG28-203ENST00000621242 STAG3Q9UJ98 1225 aa24.61■■□□□ 1.53
SNHG28-203ENST00000621242 TMEM94Q12767 1356 aa24.59■■□□□ 1.53
SNHG28-203ENST00000621242 ABCC5O15440 1437 aa24.59■■□□□ 1.53
SNHG28-203ENST00000621242 KDM5AP29375 1690 aaKnown RBP24.57■■□□□ 1.52
SNHG28-203ENST00000621242 ROBO1Q9Y6N7 1651 aa24.57■■□□□ 1.52
SNHG28-203ENST00000621242 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
SNHG28-203ENST00000621242 KCNA6P17658 529 aa24.56■■□□□ 1.52
SNHG28-203ENST00000621242 IDI1Q13907 227 aa24.56■■□□□ 1.52
SNHG28-203ENST00000621242 KANK1Q14678 1352 aa24.55■■□□□ 1.52
SNHG28-203ENST00000621242 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
SNHG28-203ENST00000621242 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
SNHG28-203ENST00000621242 POTEAQ6S8J7 498 aa24.55■■□□□ 1.52
SNHG28-203ENST00000621242 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
SNHG28-203ENST00000621242 SLC26A8Q96RN1 970 aa24.55■■□□□ 1.52
SNHG28-203ENST00000621242 TET3O43151 1660 aa24.54■■□□□ 1.52
SNHG28-203ENST00000621242 PROSER2Q86WR7 435 aaPredicted RBP24.53■■□□□ 1.52
SNHG28-203ENST00000621242 DAPK1P53355 1430 aa24.52■■□□□ 1.52
SNHG28-203ENST00000621242 LMTK2Q8IWU2 1503 aa24.5■■□□□ 1.51
SNHG28-203ENST00000621242 CHIC2Q9UKJ5 165 aa24.47■■□□□ 1.51
SNHG28-203ENST00000621242 NWD1Q149M9 1564 aa24.46■■□□□ 1.51
SNHG28-203ENST00000621242 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
SNHG28-203ENST00000621242 NOS1P29475 1434 aa24.45■■□□□ 1.51
SNHG28-203ENST00000621242 NKTRP30414 1462 aaKnown RBP24.45■■□□□ 1.5
SNHG28-203ENST00000621242 BCANQ96GW7 911 aa24.44■■□□□ 1.5
SNHG28-203ENST00000621242 PHLPP1O60346 1717 aa24.44■■□□□ 1.5
SNHG28-203ENST00000621242 ANKRD30AQ9BXX3 1397 aa24.43■■□□□ 1.5
SNHG28-203ENST00000621242 MYO5BQ9ULV0 1848 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms