RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 HSPA2P54652 639 aa20.43■□□□□ 0.86
MUC1-229ENST00000620770 CEBPAP49715 358 aaPredicted RBP20.42■□□□□ 0.86
MUC1-229ENST00000620770 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
MUC1-229ENST00000620770 UHRF1BP1Q6BDS2 1440 aa20.42■□□□□ 0.86
MUC1-229ENST00000620770 CLTCQ00610 1675 aaKnown RBP20.39■□□□□ 0.86
MUC1-229ENST00000620770 DUOX2Q9NRD8 1548 aa20.39■□□□□ 0.85
MUC1-229ENST00000620770 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
MUC1-229ENST00000620770 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
MUC1-229ENST00000620770 KIF3BO15066 747 aa20.34■□□□□ 0.85
MUC1-229ENST00000620770 ERBINQ96RT1 1412 aa20.33■□□□□ 0.84
MUC1-229ENST00000620770 ANKRD50Q9ULJ7 1429 aa20.33■□□□□ 0.84
MUC1-229ENST00000620770 STRCQ7RTU9 1775 aa20.33■□□□□ 0.84
MUC1-229ENST00000620770 NPATQ14207 1427 aa20.32■□□□□ 0.84
MUC1-229ENST00000620770 GGT6Q6P531 493 aa20.31■□□□□ 0.84
MUC1-229ENST00000620770 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
MUC1-229ENST00000620770 NAIPQ13075 1403 aa20.29■□□□□ 0.84
MUC1-229ENST00000620770 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
MUC1-229ENST00000620770 ZNF142P52746 1687 aaPredicted RBP20.29■□□□□ 0.84
MUC1-229ENST00000620770 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
MUC1-229ENST00000620770 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
MUC1-229ENST00000620770 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
MUC1-229ENST00000620770 ZMYM3Q14202 1370 aa20.28■□□□□ 0.84
MUC1-229ENST00000620770 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
MUC1-229ENST00000620770 FAM135AQ9P2D6 1515 aa20.27■□□□□ 0.83
MUC1-229ENST00000620770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.83
MUC1-229ENST00000620770 RNF17Q9BXT8 1623 aaKnown RBP20.25■□□□□ 0.83
MUC1-229ENST00000620770 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
MUC1-229ENST00000620770 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
MUC1-229ENST00000620770 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
MUC1-229ENST00000620770 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
MUC1-229ENST00000620770 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
MUC1-229ENST00000620770 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
MUC1-229ENST00000620770 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
MUC1-229ENST00000620770 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
MUC1-229ENST00000620770 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
MUC1-229ENST00000620770 KANK1Q14678 1352 aa20.19■□□□□ 0.82
MUC1-229ENST00000620770 PTPRTO14522 1441 aa20.19■□□□□ 0.82
MUC1-229ENST00000620770 UNC13BO14795 1591 aa20.18■□□□□ 0.82
MUC1-229ENST00000620770 WASHC2CQ9Y4E1 1318 aa20.18■□□□□ 0.82
MUC1-229ENST00000620770 ZC3H13Q5T200 1668 aaKnown RBP20.17■□□□□ 0.82
MUC1-229ENST00000620770 CEP152O94986 1710 aa20.16■□□□□ 0.82
MUC1-229ENST00000620770 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
MUC1-229ENST00000620770 ABCC3O15438 1527 aa20.16■□□□□ 0.82
MUC1-229ENST00000620770 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
MUC1-229ENST00000620770 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
MUC1-229ENST00000620770 PZPP20742 1482 aa20.14■□□□□ 0.81
MUC1-229ENST00000620770 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
MUC1-229ENST00000620770 NUP155O75694 1391 aa20.14■□□□□ 0.81
MUC1-229ENST00000620770 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
MUC1-229ENST00000620770 VWDEQ8N2E2 1590 aa20.11■□□□□ 0.81
MUC1-229ENST00000620770 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
MUC1-229ENST00000620770 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
MUC1-229ENST00000620770 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
MUC1-229ENST00000620770 TNRQ92752 1358 aa20.08■□□□□ 0.81
MUC1-229ENST00000620770 LMTK2Q8IWU2 1503 aa20.07■□□□□ 0.8
MUC1-229ENST00000620770 EFCAB6Q5THR3 1501 aa20.05■□□□□ 0.8
MUC1-229ENST00000620770 LTBP4Q8N2S1 1624 aa20.05■□□□□ 0.8
MUC1-229ENST00000620770 TET3O43151 1660 aa20.04■□□□□ 0.8
MUC1-229ENST00000620770 PKD2Q13563 968 aa20.04■□□□□ 0.8
MUC1-229ENST00000620770 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
MUC1-229ENST00000620770 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.8
MUC1-229ENST00000620770 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
MUC1-229ENST00000620770 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.79
MUC1-229ENST00000620770 SPATA31D1Q6ZQQ2 1576 aa20.01■□□□□ 0.79
MUC1-229ENST00000620770 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
MUC1-229ENST00000620770 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
MUC1-229ENST00000620770 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
MUC1-229ENST00000620770 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
MUC1-229ENST00000620770 E9PCH4 1651 aa19.98■□□□□ 0.79
MUC1-229ENST00000620770 NEURL4Q96JN8 1562 aa19.98■□□□□ 0.79
MUC1-229ENST00000620770 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
MUC1-229ENST00000620770 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
MUC1-229ENST00000620770 MPHOSPH9Q99550 1183 aa19.97■□□□□ 0.79
MUC1-229ENST00000620770 HRCP23327 699 aa19.96■□□□□ 0.79
MUC1-229ENST00000620770 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
MUC1-229ENST00000620770 FOXD1Q16676 465 aa19.95■□□□□ 0.78
MUC1-229ENST00000620770 UBR1Q8IWV7 1749 aa19.92■□□□□ 0.78
MUC1-229ENST00000620770 ZNF335Q9H4Z2 1342 aaPredicted RBP19.92■□□□□ 0.78
MUC1-229ENST00000620770 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
MUC1-229ENST00000620770 SYNMO15061 1565 aa19.91■□□□□ 0.78
MUC1-229ENST00000620770 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
MUC1-229ENST00000620770 NOS1P29475 1434 aa19.9■□□□□ 0.78
MUC1-229ENST00000620770 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
MUC1-229ENST00000620770 ANKLE2Q86XL3 938 aa19.88■□□□□ 0.77
MUC1-229ENST00000620770 MED14O60244 1454 aa19.86■□□□□ 0.77
MUC1-229ENST00000620770 CPS1P31327 1500 aa19.86■□□□□ 0.77
MUC1-229ENST00000620770 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
MUC1-229ENST00000620770 TRPM2O94759 1503 aa19.84■□□□□ 0.77
MUC1-229ENST00000620770 PIK3C2BO00750 1634 aa19.84■□□□□ 0.77
MUC1-229ENST00000620770 KDM5AP29375 1690 aaKnown RBP19.83■□□□□ 0.76
MUC1-229ENST00000620770 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
MUC1-229ENST00000620770 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
MUC1-229ENST00000620770 IDI1Q13907 227 aa19.81■□□□□ 0.76
MUC1-229ENST00000620770 CLTCL1P53675 1640 aa19.8■□□□□ 0.76
MUC1-229ENST00000620770 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
MUC1-229ENST00000620770 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
MUC1-229ENST00000620770 SLIT1O75093 1534 aa19.8■□□□□ 0.76
MUC1-229ENST00000620770 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
MUC1-229ENST00000620770 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
MUC1-229ENST00000620770 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms