RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ITGAEP38570 1179 aa16.53■□□□□ 0.24
TARDBP-223ENST00000620632 GGT6Q6P531 493 aa16.53■□□□□ 0.24
TARDBP-223ENST00000620632 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
TARDBP-223ENST00000620632 DEPDC5O75140 1603 aa16.52■□□□□ 0.24
TARDBP-223ENST00000620632 CEP152O94986 1710 aa16.51■□□□□ 0.23
TARDBP-223ENST00000620632 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-223ENST00000620632 ROCK1Q13464 1354 aa16.5■□□□□ 0.23
TARDBP-223ENST00000620632 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-223ENST00000620632 KDM5DQ9BY66 1539 aa16.5■□□□□ 0.23
TARDBP-223ENST00000620632 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
TARDBP-223ENST00000620632 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
TARDBP-223ENST00000620632 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
TARDBP-223ENST00000620632 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
TARDBP-223ENST00000620632 ABCC3O15438 1527 aa16.47■□□□□ 0.23
TARDBP-223ENST00000620632 FAM135AQ9P2D6 1515 aa16.46■□□□□ 0.23
TARDBP-223ENST00000620632 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
TARDBP-223ENST00000620632 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
TARDBP-223ENST00000620632 VWDEQ8N2E2 1590 aa16.45■□□□□ 0.22
TARDBP-223ENST00000620632 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
TARDBP-223ENST00000620632 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
TARDBP-223ENST00000620632 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
TARDBP-223ENST00000620632 UNC13BO14795 1591 aa16.43■□□□□ 0.22
TARDBP-223ENST00000620632 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
TARDBP-223ENST00000620632 PREX1Q8TCU6 1659 aa16.43■□□□□ 0.22
TARDBP-223ENST00000620632 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
TARDBP-223ENST00000620632 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
TARDBP-223ENST00000620632 NAIPQ13075 1403 aa16.41■□□□□ 0.22
TARDBP-223ENST00000620632 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
TARDBP-223ENST00000620632 PZPP20742 1482 aa16.4■□□□□ 0.22
TARDBP-223ENST00000620632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.212e-9■■□□□ 12.6
TARDBP-223ENST00000620632 LMTK2Q8IWU2 1503 aa16.38■□□□□ 0.21
TARDBP-223ENST00000620632 MYO3AQ8NEV4 1616 aa16.37■□□□□ 0.21
TARDBP-223ENST00000620632 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
TARDBP-223ENST00000620632 NPATQ14207 1427 aa16.37■□□□□ 0.21
TARDBP-223ENST00000620632 FBXO31Q5XUX0 539 aaPredicted RBP16.36■□□□□ 0.21
TARDBP-223ENST00000620632 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
TARDBP-223ENST00000620632 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
TARDBP-223ENST00000620632 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
TARDBP-223ENST00000620632 TET3O43151 1660 aa16.34■□□□□ 0.21
TARDBP-223ENST00000620632 ZNF142P52746 1687 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-223ENST00000620632 KANK1Q14678 1352 aa16.33■□□□□ 0.2
TARDBP-223ENST00000620632 ARHGAP31Q2M1Z3 1444 aa16.33■□□□□ 0.2
TARDBP-223ENST00000620632 ERVK-7P63135 1459 aa16.33■□□□□ 0.2
TARDBP-223ENST00000620632 E9PCH4 1651 aa16.32■□□□□ 0.2
TARDBP-223ENST00000620632 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
TARDBP-223ENST00000620632 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-223ENST00000620632 HSPA2P54652 639 aa16.3■□□□□ 0.2
TARDBP-223ENST00000620632 TNRQ92752 1358 aa16.29■□□□□ 0.2
TARDBP-223ENST00000620632 SYNMO15061 1565 aa16.29■□□□□ 0.2
TARDBP-223ENST00000620632 NUP155O75694 1391 aa16.28■□□□□ 0.2
TARDBP-223ENST00000620632 STRCQ7RTU9 1775 aa16.27■□□□□ 0.2
TARDBP-223ENST00000620632 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
TARDBP-223ENST00000620632 NOS1P29475 1434 aa16.25■□□□□ 0.19
TARDBP-223ENST00000620632 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
TARDBP-223ENST00000620632 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
TARDBP-223ENST00000620632 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
TARDBP-223ENST00000620632 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
TARDBP-223ENST00000620632 SETD5Q9C0A6 1442 aa16.23■□□□□ 0.19
TARDBP-223ENST00000620632 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
TARDBP-223ENST00000620632 MYO5BQ9ULV0 1848 aa16.21■□□□□ 0.19
TARDBP-223ENST00000620632 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.18
TARDBP-223ENST00000620632 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
TARDBP-223ENST00000620632 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
TARDBP-223ENST00000620632 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-223ENST00000620632 KDM5AP29375 1690 aaKnown RBP16.17■□□□□ 0.18
TARDBP-223ENST00000620632 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
TARDBP-223ENST00000620632 IDI1Q13907 227 aa16.15■□□□□ 0.18
TARDBP-223ENST00000620632 ADGRB3O60242 1522 aa16.14■□□□□ 0.18
TARDBP-223ENST00000620632 NEURL4Q96JN8 1562 aa16.14■□□□□ 0.17
TARDBP-223ENST00000620632 PTPRTO14522 1441 aa16.14■□□□□ 0.17
TARDBP-223ENST00000620632 TMEM131LA2VDJ0 1609 aa16.14■□□□□ 0.17
TARDBP-223ENST00000620632 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
TARDBP-223ENST00000620632 PKD2Q13563 968 aa16.13■□□□□ 0.17
TARDBP-223ENST00000620632 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
TARDBP-223ENST00000620632 TRPM2O94759 1503 aa16.13■□□□□ 0.17
TARDBP-223ENST00000620632 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
TARDBP-223ENST00000620632 ARHGAP23Q9P227 1491 aa16.11■□□□□ 0.17
TARDBP-223ENST00000620632 SLIT1O75093 1534 aa16.11■□□□□ 0.17
TARDBP-223ENST00000620632 FOXD1Q16676 465 aa16.11■□□□□ 0.17
TARDBP-223ENST00000620632 MPHOSPH9Q99550 1183 aa16.1■□□□□ 0.17
TARDBP-223ENST00000620632 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
TARDBP-223ENST00000620632 THEMISQ8N1K5 641 aaPredicted RBP16.09■□□□□ 0.17
TARDBP-223ENST00000620632 KIF1BO60333 1816 aa16.08■□□□□ 0.16
TARDBP-223ENST00000620632 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
TARDBP-223ENST00000620632 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
TARDBP-223ENST00000620632 HRCP23327 699 aa16.06■□□□□ 0.16
TARDBP-223ENST00000620632 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-223ENST00000620632 LTKP29376 864 aa16.05■□□□□ 0.16
TARDBP-223ENST00000620632 MED14O60244 1454 aa16.04■□□□□ 0.16
TARDBP-223ENST00000620632 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
TARDBP-223ENST00000620632 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
TARDBP-223ENST00000620632 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
TARDBP-223ENST00000620632 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
TARDBP-223ENST00000620632 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
TARDBP-223ENST00000620632 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
TARDBP-223ENST00000620632 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
TARDBP-223ENST00000620632 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
TARDBP-223ENST00000620632 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
TARDBP-223ENST00000620632 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
TARDBP-223ENST00000620632 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms