RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
NEK3-209ENST00000618856 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
NEK3-209ENST00000618856 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
NEK3-209ENST00000618856 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
NEK3-209ENST00000618856 ZMYM3Q14202 1370 aa12.72□□□□□ -0.37
NEK3-209ENST00000618856 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
NEK3-209ENST00000618856 KIF3BO15066 747 aa12.72□□□□□ -0.37
NEK3-209ENST00000618856 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
NEK3-209ENST00000618856 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
NEK3-209ENST00000618856 NPATQ14207 1427 aa12.71□□□□□ -0.37
NEK3-209ENST00000618856 ROCK1Q13464 1354 aa12.71□□□□□ -0.37
NEK3-209ENST00000618856 DEPDC5O75140 1603 aa12.71□□□□□ -0.37
NEK3-209ENST00000618856 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
NEK3-209ENST00000618856 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
NEK3-209ENST00000618856 GGT6Q6P531 493 aa12.71□□□□□ -0.37
NEK3-209ENST00000618856 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
NEK3-209ENST00000618856 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
NEK3-209ENST00000618856 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
NEK3-209ENST00000618856 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
NEK3-209ENST00000618856 ABCC3O15438 1527 aa12.68□□□□□ -0.38
NEK3-209ENST00000618856 PREX1Q8TCU6 1659 aa12.68□□□□□ -0.38
NEK3-209ENST00000618856 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
NEK3-209ENST00000618856 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
NEK3-209ENST00000618856 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
NEK3-209ENST00000618856 PZPP20742 1482 aa12.66□□□□□ -0.38
NEK3-209ENST00000618856 LMTK2Q8IWU2 1503 aa12.66□□□□□ -0.38
NEK3-209ENST00000618856 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
NEK3-209ENST00000618856 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
NEK3-209ENST00000618856 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
NEK3-209ENST00000618856 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
NEK3-209ENST00000618856 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
NEK3-209ENST00000618856 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
NEK3-209ENST00000618856 UNC13BO14795 1591 aa12.61□□□□□ -0.39
NEK3-209ENST00000618856 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
NEK3-209ENST00000618856 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
NEK3-209ENST00000618856 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
NEK3-209ENST00000618856 MYO3AQ8NEV4 1616 aa12.61□□□□□ -0.39
NEK3-209ENST00000618856 CEP152O94986 1710 aa12.6□□□□□ -0.39
NEK3-209ENST00000618856 FBXO31Q5XUX0 539 aaPredicted RBP12.59□□□□□ -0.39
NEK3-209ENST00000618856 NAIPQ13075 1403 aa12.59□□□□□ -0.39
NEK3-209ENST00000618856 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
NEK3-209ENST00000618856 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
NEK3-209ENST00000618856 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 KANK1Q14678 1352 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 TNRQ92752 1358 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 HFM1A2PYH4 1435 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 HSPA2P54652 639 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
NEK3-209ENST00000618856 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
NEK3-209ENST00000618856 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
NEK3-209ENST00000618856 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
NEK3-209ENST00000618856 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
NEK3-209ENST00000618856 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
NEK3-209ENST00000618856 ITGAEP38570 1179 aa12.55□□□□□ -0.4
NEK3-209ENST00000618856 TET3O43151 1660 aa12.54□□□□□ -0.4
NEK3-209ENST00000618856 NOS1P29475 1434 aa12.54□□□□□ -0.4
NEK3-209ENST00000618856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEK3-209ENST00000618856 PTPRTO14522 1441 aa12.51□□□□□ -0.41
NEK3-209ENST00000618856 SYNMO15061 1565 aa12.51□□□□□ -0.41
NEK3-209ENST00000618856 NUP155O75694 1391 aa12.5□□□□□ -0.41
NEK3-209ENST00000618856 KDM5AP29375 1690 aaKnown RBP12.5□□□□□ -0.41
NEK3-209ENST00000618856 E9PCH4 1651 aa12.49□□□□□ -0.41
NEK3-209ENST00000618856 UGGT1Q9NYU2 1555 aa12.49□□□□□ -0.41
NEK3-209ENST00000618856 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
NEK3-209ENST00000618856 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
NEK3-209ENST00000618856 PIK3C2BO00750 1634 aa12.48□□□□□ -0.41
NEK3-209ENST00000618856 PKD2Q13563 968 aa12.47□□□□□ -0.41
NEK3-209ENST00000618856 THEMISQ8N1K5 641 aaPredicted RBP12.47□□□□□ -0.41
NEK3-209ENST00000618856 SLIT1O75093 1534 aa12.47□□□□□ -0.41
NEK3-209ENST00000618856 MED14O60244 1454 aa12.46□□□□□ -0.41
NEK3-209ENST00000618856 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
NEK3-209ENST00000618856 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
NEK3-209ENST00000618856 NEURL4Q96JN8 1562 aa12.46□□□□□ -0.42
NEK3-209ENST00000618856 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
NEK3-209ENST00000618856 ADRA2BP18089 450 aa12.45□□□□□ -0.42
NEK3-209ENST00000618856 IDI1Q13907 227 aa12.45□□□□□ -0.42
NEK3-209ENST00000618856 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
NEK3-209ENST00000618856 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
NEK3-209ENST00000618856 ADGRB3O60242 1522 aa12.42□□□□□ -0.42
NEK3-209ENST00000618856 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
NEK3-209ENST00000618856 TMEM131LA2VDJ0 1609 aa12.41□□□□□ -0.42
NEK3-209ENST00000618856 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
NEK3-209ENST00000618856 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
NEK3-209ENST00000618856 ANKLE2Q86XL3 938 aa12.4□□□□□ -0.42
NEK3-209ENST00000618856 TRPM2O94759 1503 aa12.4□□□□□ -0.42
NEK3-209ENST00000618856 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
NEK3-209ENST00000618856 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.43
NEK3-209ENST00000618856 HRCP23327 699 aa12.39□□□□□ -0.43
NEK3-209ENST00000618856 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
NEK3-209ENST00000618856 LTKP29376 864 aa12.38□□□□□ -0.43
NEK3-209ENST00000618856 SCAF11Q99590 1463 aaKnown RBP12.38□□□□□ -0.43
NEK3-209ENST00000618856 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
NEK3-209ENST00000618856 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
NEK3-209ENST00000618856 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
NEK3-209ENST00000618856 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
NEK3-209ENST00000618856 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
NEK3-209ENST00000618856 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
NEK3-209ENST00000618856 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
NEK3-209ENST00000618856 MYO5BQ9ULV0 1848 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms