RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 MYOM3Q5VTT5 1437 aa8.24□□□□□ -1.09
GTDC1-220ENST00000618778 ARID4BQ4LE39 1312 aaPredicted RBP8.23□□□□□ -1.09
GTDC1-220ENST00000618778 MLECQ14165 292 aa8.23□□□□□ -1.09
GTDC1-220ENST00000618778 PTPRMP28827 1452 aa8.23□□□□□ -1.09
GTDC1-220ENST00000618778 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
GTDC1-220ENST00000618778 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
GTDC1-220ENST00000618778 PPARGC1BQ86YN6 1023 aaKnown RBP8.23□□□□□ -1.09
GTDC1-220ENST00000618778 CCDC141Q6ZP82 1450 aa8.22□□□□□ -1.09
GTDC1-220ENST00000618778 PLEKHH2Q8IVE3 1493 aa8.22□□□□□ -1.09
GTDC1-220ENST00000618778 C3P01024 1663 aa8.22□□□□□ -1.09
GTDC1-220ENST00000618778 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.09
GTDC1-220ENST00000618778 MYT1LQ9UL68 1186 aa8.21□□□□□ -1.09
GTDC1-220ENST00000618778 CLTCQ00610 1675 aaKnown RBP8.21□□□□□ -1.1
GTDC1-220ENST00000618778 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
GTDC1-220ENST00000618778 FGD6Q6ZV73 1430 aa8.2□□□□□ -1.1
GTDC1-220ENST00000618778 SPAG9O60271 1321 aaKnown RBP8.2□□□□□ -1.1
GTDC1-220ENST00000618778 AGLP35573 1532 aa8.19□□□□□ -1.1
GTDC1-220ENST00000618778 POTEHQ6S545 545 aa8.19□□□□□ -1.1
GTDC1-220ENST00000618778 MAST1Q9Y2H9 1570 aa8.19□□□□□ -1.1
GTDC1-220ENST00000618778 AKT1S1Q96B36 256 aa8.19□□□□□ -1.1
GTDC1-220ENST00000618778 A2MP01023 1474 aa8.19□□□□□ -1.1
GTDC1-220ENST00000618778 TCOF1Q13428 1488 aaKnown RBP8.18□□□□□ -1.1
GTDC1-220ENST00000618778 MIA2Q96PC5 1412 aa8.17□□□□□ -1.1
GTDC1-220ENST00000618778 CEP152O94986 1710 aa8.17□□□□□ -1.1
GTDC1-220ENST00000618778 MROH1Q8NDA8 1641 aa8.17□□□□□ -1.1
GTDC1-220ENST00000618778 ABCC5O15440 1437 aa8.16□□□□□ -1.1
GTDC1-220ENST00000618778 CEBPAP49715 358 aaPredicted RBP8.16□□□□□ -1.1
GTDC1-220ENST00000618778 DAPK1P53355 1430 aa8.16□□□□□ -1.1
GTDC1-220ENST00000618778 LMTK3Q96Q04 1460 aa8.16□□□□□ -1.1
GTDC1-220ENST00000618778 MROH2AA6NES4 1674 aa8.16□□□□□ -1.1
GTDC1-220ENST00000618778 PREX1Q8TCU6 1659 aa8.15□□□□□ -1.1
GTDC1-220ENST00000618778 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.1
GTDC1-220ENST00000618778 RNF17Q9BXT8 1623 aaKnown RBP8.15□□□□□ -1.1
GTDC1-220ENST00000618778 PTPRKQ15262 1439 aa8.14□□□□□ -1.11
GTDC1-220ENST00000618778 SHANK2Q9UPX8 1470 aa8.14□□□□□ -1.11
GTDC1-220ENST00000618778 CFAP65Q6ZU64 1925 aaKnown RBP8.14□□□□□ -1.11
GTDC1-220ENST00000618778 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
GTDC1-220ENST00000618778 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
GTDC1-220ENST00000618778 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
GTDC1-220ENST00000618778 EIF2AK4Q9P2K8 1649 aaKnown RBP8.13□□□□□ -1.11
GTDC1-220ENST00000618778 MYO3AQ8NEV4 1616 aa8.12□□□□□ -1.11
GTDC1-220ENST00000618778 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
GTDC1-220ENST00000618778 DHX29Q7Z478 1369 aaKnown RBP8.12□□□□□ -1.11
GTDC1-220ENST00000618778 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 KDM5DQ9BY66 1539 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 CHIC2Q9UKJ5 165 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 CAMSAP1Q5T5Y3 1602 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 KIF15Q9NS87 1388 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
GTDC1-220ENST00000618778 GGT6Q6P531 493 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 CHRDL2Q6WN34 429 aa8.11□□□□□ -1.11
GTDC1-220ENST00000618778 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
GTDC1-220ENST00000618778 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-220ENST00000618778 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
GTDC1-220ENST00000618778 HSPA2P54652 639 aa8.1□□□□□ -1.11
GTDC1-220ENST00000618778 ABCC3O15438 1527 aa8.1□□□□□ -1.11
GTDC1-220ENST00000618778 KIF3BO15066 747 aa8.09□□□□□ -1.11
GTDC1-220ENST00000618778 ZNF142P52746 1687 aaPredicted RBP8.09□□□□□ -1.11
GTDC1-220ENST00000618778 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
GTDC1-220ENST00000618778 ADGRL2O95490 1459 aa8.09□□□□□ -1.11
GTDC1-220ENST00000618778 ZEB1P37275 1124 aaPredicted RBP8.09□□□□□ -1.11
GTDC1-220ENST00000618778 RRP7BPQ9NSQ0 103 aa8.09□□□□□ -1.11
GTDC1-220ENST00000618778 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
GTDC1-220ENST00000618778 TSPY4P0CV99 314 aa8.08□□□□□ -1.12
GTDC1-220ENST00000618778 TSPY10P0CW01 314 aa8.08□□□□□ -1.12
GTDC1-220ENST00000618778 NCOA1Q15788 1441 aa8.08□□□□□ -1.12
GTDC1-220ENST00000618778 CNTLNQ9NXG0 1405 aa8.07□□□□□ -1.12
GTDC1-220ENST00000618778 ZMYM3Q14202 1370 aa8.07□□□□□ -1.12
GTDC1-220ENST00000618778 ERBINQ96RT1 1412 aa8.07□□□□□ -1.12
GTDC1-220ENST00000618778 CEP170BQ9Y4F5 1589 aaPredicted RBP8.06□□□□□ -1.12
GTDC1-220ENST00000618778 RRBP1Q9P2E9 1410 aaKnown RBP8.06□□□□□ -1.12
GTDC1-220ENST00000618778 ITGAEP38570 1179 aa8.06□□□□□ -1.12
GTDC1-220ENST00000618778 VWDEQ8N2E2 1590 aa8.06□□□□□ -1.12
GTDC1-220ENST00000618778 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
GTDC1-220ENST00000618778 SSUH2Q9Y2M2 353 aa8.06□□□□□ -1.12
GTDC1-220ENST00000618778 PZPP20742 1482 aa8.05□□□□□ -1.12
GTDC1-220ENST00000618778 UNC13BO14795 1591 aa8.05□□□□□ -1.12
GTDC1-220ENST00000618778 GCC2Q8IWJ2 1684 aa8.05□□□□□ -1.12
GTDC1-220ENST00000618778 UHRF1BP1Q6BDS2 1440 aa8.05□□□□□ -1.12
GTDC1-220ENST00000618778 FBXO31Q5XUX0 539 aaPredicted RBP8.04□□□□□ -1.12
GTDC1-220ENST00000618778 ZNF692Q9BU19 519 aaPredicted RBP8.04□□□□□ -1.12
GTDC1-220ENST00000618778 SPATA31D1Q6ZQQ2 1576 aa8.04□□□□□ -1.12
GTDC1-220ENST00000618778 ANKRD30AQ9BXX3 1397 aa8.04□□□□□ -1.12
GTDC1-220ENST00000618778 MYO5BQ9ULV0 1848 aa8.04□□□□□ -1.12
GTDC1-220ENST00000618778 FAM135AQ9P2D6 1515 aa8.04□□□□□ -1.12
GTDC1-220ENST00000618778 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
GTDC1-220ENST00000618778 NPATQ14207 1427 aa8.03□□□□□ -1.12
GTDC1-220ENST00000618778 ERVK-7P63135 1459 aa8.03□□□□□ -1.12
GTDC1-220ENST00000618778 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
GTDC1-220ENST00000618778 SYNMO15061 1565 aa8.03□□□□□ -1.12
GTDC1-220ENST00000618778 POLR1AO95602 1720 aaPredicted RBP8.03□□□□□ -1.12
GTDC1-220ENST00000618778 E9PCH4 1651 aa8.02□□□□□ -1.13
GTDC1-220ENST00000618778 PITPNM1O00562 1244 aa8.02□□□□□ -1.13
GTDC1-220ENST00000618778 ANKRD50Q9ULJ7 1429 aa8.02□□□□□ -1.13
GTDC1-220ENST00000618778 UBR1Q8IWV7 1749 aa8.02□□□□□ -1.13
GTDC1-220ENST00000618778 WASHC2CQ9Y4E1 1318 aa8.02□□□□□ -1.13
GTDC1-220ENST00000618778 TET3O43151 1660 aa8.01□□□□□ -1.13
GTDC1-220ENST00000618778 NEURL4Q96JN8 1562 aa8.01□□□□□ -1.13
GTDC1-220ENST00000618778 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
GTDC1-220ENST00000618778 IQGAP3Q86VI3 1631 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms