RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
SRRT-216ENST00000618262 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
SRRT-216ENST00000618262 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
SRRT-216ENST00000618262 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
SRRT-216ENST00000618262 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
SRRT-216ENST00000618262 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
SRRT-216ENST00000618262 ATP7AQ04656 1500 aa17.1■□□□□ 0.33
SRRT-216ENST00000618262 NUP155O75694 1391 aa17.1■□□□□ 0.33
SRRT-216ENST00000618262 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
SRRT-216ENST00000618262 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.33
SRRT-216ENST00000618262 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
SRRT-216ENST00000618262 FGD1P98174 961 aa17.08■□□□□ 0.32
SRRT-216ENST00000618262 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
SRRT-216ENST00000618262 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
SRRT-216ENST00000618262 CFAP74Q9C0B2 1584 aa17.07■□□□□ 0.32
SRRT-216ENST00000618262 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
SRRT-216ENST00000618262 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
SRRT-216ENST00000618262 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
SRRT-216ENST00000618262 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
SRRT-216ENST00000618262 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
SRRT-216ENST00000618262 RICTORQ6R327 1708 aa17.04■□□□□ 0.32
SRRT-216ENST00000618262 PKD2Q13563 968 aa17.04■□□□□ 0.32
SRRT-216ENST00000618262 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
SRRT-216ENST00000618262 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
SRRT-216ENST00000618262 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
SRRT-216ENST00000618262 A2MP01023 1474 aa17.02■□□□□ 0.32
SRRT-216ENST00000618262 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
SRRT-216ENST00000618262 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.31
SRRT-216ENST00000618262 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
SRRT-216ENST00000618262 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
SRRT-216ENST00000618262 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
SRRT-216ENST00000618262 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
SRRT-216ENST00000618262 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
SRRT-216ENST00000618262 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
SRRT-216ENST00000618262 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
SRRT-216ENST00000618262 KDM5CP41229 1560 aa17■□□□□ 0.31
SRRT-216ENST00000618262 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
SRRT-216ENST00000618262 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
SRRT-216ENST00000618262 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
SRRT-216ENST00000618262 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
SRRT-216ENST00000618262 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
SRRT-216ENST00000618262 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
SRRT-216ENST00000618262 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
SRRT-216ENST00000618262 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
SRRT-216ENST00000618262 ATP10AO60312 1499 aa16.95■□□□□ 0.3
SRRT-216ENST00000618262 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
SRRT-216ENST00000618262 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
SRRT-216ENST00000618262 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
SRRT-216ENST00000618262 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
SRRT-216ENST00000618262 GCC2Q8IWJ2 1684 aa16.93■□□□□ 0.3
SRRT-216ENST00000618262 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
SRRT-216ENST00000618262 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
SRRT-216ENST00000618262 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
SRRT-216ENST00000618262 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
SRRT-216ENST00000618262 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
SRRT-216ENST00000618262 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
SRRT-216ENST00000618262 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
SRRT-216ENST00000618262 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
SRRT-216ENST00000618262 PZPP20742 1482 aa16.89■□□□□ 0.29
SRRT-216ENST00000618262 KANK1Q14678 1352 aa16.88■□□□□ 0.29
SRRT-216ENST00000618262 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
SRRT-216ENST00000618262 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
SRRT-216ENST00000618262 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
SRRT-216ENST00000618262 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
SRRT-216ENST00000618262 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
SRRT-216ENST00000618262 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
SRRT-216ENST00000618262 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
SRRT-216ENST00000618262 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
SRRT-216ENST00000618262 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
SRRT-216ENST00000618262 AAMPQ13685 434 aa16.83■□□□□ 0.29
SRRT-216ENST00000618262 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
SRRT-216ENST00000618262 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
SRRT-216ENST00000618262 MROH1Q8NDA8 1641 aa16.79■□□□□ 0.28
SRRT-216ENST00000618262 CEP152O94986 1710 aa16.79■□□□□ 0.28
SRRT-216ENST00000618262 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
SRRT-216ENST00000618262 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
SRRT-216ENST00000618262 NPATQ14207 1427 aa16.77■□□□□ 0.27
SRRT-216ENST00000618262 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.27
SRRT-216ENST00000618262 BRD2P25440 801 aaKnown RBP16.76■□□□□ 0.27
SRRT-216ENST00000618262 ANKRD30BQ9BXX2 1392 aa16.75■□□□□ 0.27
SRRT-216ENST00000618262 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
SRRT-216ENST00000618262 ABCC3O15438 1527 aa16.74■□□□□ 0.27
SRRT-216ENST00000618262 IDI1Q13907 227 aa16.74■□□□□ 0.27
SRRT-216ENST00000618262 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
SRRT-216ENST00000618262 UNC13BO14795 1591 aa16.74■□□□□ 0.27
SRRT-216ENST00000618262 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
SRRT-216ENST00000618262 RBM10P98175 930 aaKnown RBP16.73■□□□□ 0.27
SRRT-216ENST00000618262 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
SRRT-216ENST00000618262 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
SRRT-216ENST00000618262 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
SRRT-216ENST00000618262 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
SRRT-216ENST00000618262 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
SRRT-216ENST00000618262 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
SRRT-216ENST00000618262 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.27
SRRT-216ENST00000618262 ZMYND15Q9H091 742 aa16.71■□□□□ 0.27
SRRT-216ENST00000618262 E9PCH4 1651 aa16.7■□□□□ 0.26
SRRT-216ENST00000618262 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
SRRT-216ENST00000618262 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SRRT-216ENST00000618262 GLIPR1L2Q4G1C9 344 aa16.7■□□□□ 0.26
SRRT-216ENST00000618262 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms