RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, human

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-213	ENST00000618217	GGT6	Q6P531	493 aa		34	■■■■□ 3.03
CBWD3-213	ENST00000618217	ADAMTSL3	P82987	1691 aa		33.98	■■■■□ 3.03
CBWD3-213	ENST00000618217	UNC13B	O14795	1591 aa		33.96	■■■■□ 3.03
CBWD3-213	ENST00000618217	PRDM15	P57071	1507 aa	Predicted RBP	33.96	■■■■□ 3.03
CBWD3-213	ENST00000618217	PPP6R1	Q9UPN7	881 aa		33.94	■■■■□ 3.02
CBWD3-213	ENST00000618217	RAB3GAP2	Q9H2M9	1393 aa		33.93	■■■■□ 3.02
CBWD3-213	ENST00000618217	VWDE	Q8N2E2	1590 aa		33.92	■■■■□ 3.02
CBWD3-213	ENST00000618217	PCGF6	Q9BYE7	350 aa		33.91	■■■■□ 3.02
CBWD3-213	ENST00000618217	KDM5D	Q9BY66	1539 aa		33.89	■■■■□ 3.02
CBWD3-213	ENST00000618217	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.89	■■■■□ 3.02
CBWD3-213	ENST00000618217	FER1L4	A9Z1Z3	1794 aa		33.88	■■■■□ 3.01
CBWD3-213	ENST00000618217	FAM135A	Q9P2D6	1515 aa		33.88	■■■■□ 3.01
CBWD3-213	ENST00000618217	MADD	Q8WXG6	1647 aa		33.88	■■■■□ 3.01
CBWD3-213	ENST00000618217	HRC	P23327	699 aa		33.86	■■■■□ 3.01
CBWD3-213	ENST00000618217	ABCC3	O15438	1527 aa		33.85	■■■■□ 3.01
CBWD3-213	ENST00000618217	KDM4F	A0A1W2PPD8	638 aa		33.85	■■■■□ 3.01
CBWD3-213	ENST00000618217	CLTC	Q00610	1675 aa	Known RBP	33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	NUP155	O75694	1391 aa		33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	KANK1	Q14678	1352 aa		33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	IQGAP3	Q86VI3	1631 aa		33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	ZC3H13	Q5T200	1668 aa	Known RBP	33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	CEP152	O94986	1710 aa		33.83	■■■■□ 3.01
CBWD3-213	ENST00000618217	WASHC2C	Q9Y4E1	1318 aa		33.82	■■■■□ 3.01
CBWD3-213	ENST00000618217	LMTK2	Q8IWU2	1503 aa		33.8	■■■■□ 3
CBWD3-213	ENST00000618217	CNTLN	Q9NXG0	1405 aa		33.8	■■■■□ 3
CBWD3-213	ENST00000618217	ACIN1	Q9UKV3	1341 aa	Known RBP	33.79	■■■■□ 3
CBWD3-213	ENST00000618217	RIMS1	Q86UR5	1692 aa	Known RBP	33.79	■■■■□ 3
CBWD3-213	ENST00000618217	MROH2A	A6NES4	1674 aa		33.78	■■■■□ 3
CBWD3-213	ENST00000618217	TRIM52	Q96A61	297 aa		33.76	■■■■□ 3
CBWD3-213	ENST00000618217	ESF1	Q9H501	851 aa	Known RBP	33.76	■■■■□ 3
CBWD3-213	ENST00000618217	PZP	P20742	1482 aa		33.74	■■■□□ 2.99
CBWD3-213	ENST00000618217	CAMSAP1	Q5T5Y3	1602 aa		33.74	■■■□□ 2.99
CBWD3-213	ENST00000618217	TET3	O43151	1660 aa		33.73	■■■□□ 2.99
CBWD3-213	ENST00000618217	ZMYM3	Q14202	1370 aa		33.72	■■■□□ 2.99
CBWD3-213	ENST00000618217	EFCAB6	Q5THR3	1501 aa		33.69	■■■□□ 2.98
CBWD3-213	ENST00000618217	C3	P01024	1663 aa		33.69	■■■□□ 2.98
CBWD3-213	ENST00000618217	PTPRM	P28827	1452 aa		33.69	■■■□□ 2.98
CBWD3-213	ENST00000618217	ARHGAP31	Q2M1Z3	1444 aa		33.68	■■■□□ 2.98
CBWD3-213	ENST00000618217	NPAT	Q14207	1427 aa		33.64	■■■□□ 2.98
CBWD3-213	ENST00000618217		E9PCH4	1651 aa		33.64	■■■□□ 2.98
CBWD3-213	ENST00000618217	CEBPA	P49715	358 aa	Predicted RBP	33.63	■■■□□ 2.97
CBWD3-213	ENST00000618217	MPHOSPH9	Q99550	1183 aa		33.63	■■■□□ 2.97
CBWD3-213	ENST00000618217	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.62	■■■□□ 2.97
CBWD3-213	ENST00000618217	CFAP65	Q6ZU64	1925 aa	Known RBP	33.6	■■■□□ 2.97
CBWD3-213	ENST00000618217	RPRD2	Q5VT52	1461 aa	Known RBP	33.59	■■■□□ 2.97
CBWD3-213	ENST00000618217	PKD2	Q13563	968 aa		33.57	■■■□□ 2.96
CBWD3-213	ENST00000618217	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.56	■■■□□ 2.96
CBWD3-213	ENST00000618217	PREX1	Q8TCU6	1659 aa		33.54	■■■□□ 2.96
CBWD3-213	ENST00000618217	ERVK-7	P63135	1459 aa		33.52	■■■□□ 2.96
CBWD3-213	ENST00000618217	SPATA31D1	Q6ZQQ2	1576 aa		33.52	■■■□□ 2.96
CBWD3-213	ENST00000618217	PLPPR3	Q6T4P5	718 aa		33.5	■■■□□ 2.95
CBWD3-213	ENST00000618217	NOS1	P29475	1434 aa		33.5	■■■□□ 2.95
CBWD3-213	ENST00000618217	FOXD1	Q16676	465 aa		33.47	■■■□□ 2.95
CBWD3-213	ENST00000618217	SETD1B	Q9UPS6	1966 aa	Known RBP	33.47	■■■□□ 2.95
CBWD3-213	ENST00000618217	PTPRT	O14522	1441 aa		33.46	■■■□□ 2.95
CBWD3-213	ENST00000618217	PLA2R1	Q13018	1463 aa		33.44	■■■□□ 2.94
CBWD3-213	ENST00000618217	SYNM	O15061	1565 aa		33.44	■■■□□ 2.94
CBWD3-213	ENST00000618217	SPHKAP	Q2M3C7	1700 aa		33.44	■■■□□ 2.94
CBWD3-213	ENST00000618217	DHX57	Q6P158	1386 aa	Known RBP	33.44	■■■□□ 2.94
CBWD3-213	ENST00000618217	TNR	Q92752	1358 aa		33.42	■■■□□ 2.94
CBWD3-213	ENST00000618217	TRPM2	O94759	1503 aa		33.37	■■■□□ 2.93
CBWD3-213	ENST00000618217	ANKRD30B	Q9BXX2	1392 aa		33.35	■■■□□ 2.93
CBWD3-213	ENST00000618217	PIK3C2B	O00750	1634 aa		33.35	■■■□□ 2.93
CBWD3-213	ENST00000618217	MYO3A	Q8NEV4	1616 aa		33.34	■■■□□ 2.93
CBWD3-213	ENST00000618217	UGGT1	Q9NYU2	1555 aa		33.33	■■■□□ 2.93
CBWD3-213	ENST00000618217	SLC52A1	Q9NWF4	448 aa		33.31	■■■□□ 2.92
CBWD3-213	ENST00000618217	NLRP1	Q9C000	1473 aa		33.31	■■■□□ 2.92
CBWD3-213	ENST00000618217	IDI1	Q13907	227 aa		33.31	■■■□□ 2.92
CBWD3-213	ENST00000618217	CLTCL1	P53675	1640 aa		33.28	■■■□□ 2.92
CBWD3-213	ENST00000618217	ZNF142	P52746	1687 aa	Predicted RBP	33.25	■■■□□ 2.91
CBWD3-213	ENST00000618217	UHRF1BP1	Q6BDS2	1440 aa		33.24	■■■□□ 2.91
CBWD3-213	ENST00000618217	A2ML1	A8K2U0	1454 aa		33.24	■■■□□ 2.91
CBWD3-213	ENST00000618217	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.24	■■■□□ 2.91
CBWD3-213	ENST00000618217	CCDC144A	A2RUR9	1427 aa		33.21	■■■□□ 2.91
CBWD3-213	ENST00000618217	KDM5A	P29375	1690 aa	Known RBP	33.2	■■■□□ 2.91
CBWD3-213	ENST00000618217	UBR1	Q8IWV7	1749 aa		33.2	■■■□□ 2.9
CBWD3-213	ENST00000618217	TMEM131L	A2VDJ0	1609 aa		33.19	■■■□□ 2.9
CBWD3-213	ENST00000618217	LMTK3	Q96Q04	1460 aa		33.19	■■■□□ 2.9
CBWD3-213	ENST00000618217	KIF1B	O60333	1816 aa		33.16	■■■□□ 2.9
CBWD3-213	ENST00000618217	ADGRB3	O60242	1522 aa		33.16	■■■□□ 2.9
CBWD3-213	ENST00000618217	MYO5B	Q9ULV0	1848 aa		33.16	■■■□□ 2.9
CBWD3-213	ENST00000618217	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.14	■■■□□ 2.9
CBWD3-213	ENST00000618217	SPATA31E1	Q6ZUB1	1445 aa		33.1	■■■□□ 2.89
CBWD3-213	ENST00000618217	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.08	■■■□□ 2.89
CBWD3-213	ENST00000618217	NEURL4	Q96JN8	1562 aa		33.08	■■■□□ 2.89
CBWD3-213	ENST00000618217	SIN3A	Q96ST3	1273 aa		33.08	■■■□□ 2.89
CBWD3-213	ENST00000618217	STAG3	Q9UJ98	1225 aa		33.07	■■■□□ 2.88
CBWD3-213	ENST00000618217	CLSPN	Q9HAW4	1339 aa		33.07	■■■□□ 2.88
CBWD3-213	ENST00000618217	CHGA	P10645	457 aa	Known RBP	33.06	■■■□□ 2.88
CBWD3-213	ENST00000618217	CCER1	Q8TC90	406 aa	Predicted RBP	33.06	■■■□□ 2.88
CBWD3-213	ENST00000618217	ARHGAP23	Q9P227	1491 aa		33.02	■■■□□ 2.88
CBWD3-213	ENST00000618217	HSPA2	P54652	639 aa		33.02	■■■□□ 2.88
CBWD3-213	ENST00000618217	SLIT1	O75093	1534 aa		33.02	■■■□□ 2.88
CBWD3-213	ENST00000618217	TMEM2	Q9UHN6	1383 aa		33.01	■■■□□ 2.87
CBWD3-213	ENST00000618217	ZFYVE9	O95405	1425 aa		32.97	■■■□□ 2.87
CBWD3-213	ENST00000618217	NEUROD1	Q13562	356 aa		32.96	■■■□□ 2.87
CBWD3-213	ENST00000618217	RGL3	Q3MIN7	710 aa		32.96	■■■□□ 2.87
CBWD3-213	ENST00000618217	NEXMIF	Q5QGS0	1516 aa		32.94	■■■□□ 2.86
CBWD3-213	ENST00000618217	RIMS2	Q9UQ26	1411 aa		32.94	■■■□□ 2.86
CBWD3-213	ENST00000618217	ZNF326	Q5BKZ1	582 aa	Known RBP	32.94	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms