RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 ALKQ9UM73 1620 aa19.44■□□□□ 0.7
COL4A2-210ENST00000617564 ADGBQ8N7X0 1667 aa19.44■□□□□ 0.7
COL4A2-210ENST00000617564 EHBP1L1Q8N3D4 1523 aa19.44■□□□□ 0.7
COL4A2-210ENST00000617564 TIAM1Q13009 1591 aa19.43■□□□□ 0.7
COL4A2-210ENST00000617564 RTEL1-TNFRSF6BF6WH68 1400 aa19.4■□□□□ 0.7
COL4A2-210ENST00000617564 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
COL4A2-210ENST00000617564 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
COL4A2-210ENST00000617564 MBD5Q9P267 1494 aa19.39■□□□□ 0.69
COL4A2-210ENST00000617564 GGT6Q6P531 493 aa19.37■□□□□ 0.69
COL4A2-210ENST00000617564 FAM135AQ9P2D6 1515 aa19.35■□□□□ 0.69
COL4A2-210ENST00000617564 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
COL4A2-210ENST00000617564 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
COL4A2-210ENST00000617564 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
COL4A2-210ENST00000617564 NEURL4Q96JN8 1562 aa19.34■□□□□ 0.69
COL4A2-210ENST00000617564 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.69
COL4A2-210ENST00000617564 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
COL4A2-210ENST00000617564 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
COL4A2-210ENST00000617564 CCDC141Q6ZP82 1450 aa19.32■□□□□ 0.68
COL4A2-210ENST00000617564 SETD1AO15047 1707 aaKnown RBP19.3■□□□□ 0.68
COL4A2-210ENST00000617564 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
COL4A2-210ENST00000617564 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
COL4A2-210ENST00000617564 PZPP20742 1482 aa19.28■□□□□ 0.68
COL4A2-210ENST00000617564 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
COL4A2-210ENST00000617564 RNF17Q9BXT8 1623 aaKnown RBP19.27■□□□□ 0.68
COL4A2-210ENST00000617564 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
COL4A2-210ENST00000617564 TNRQ92752 1358 aa19.26■□□□□ 0.67
COL4A2-210ENST00000617564 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
COL4A2-210ENST00000617564 ARHGEF5Q12774 1597 aa19.24■□□□□ 0.67
COL4A2-210ENST00000617564 KIF3BO15066 747 aa19.24■□□□□ 0.67
COL4A2-210ENST00000617564 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
COL4A2-210ENST00000617564 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
COL4A2-210ENST00000617564 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
COL4A2-210ENST00000617564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL4A2-210ENST00000617564 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL4A2-210ENST00000617564 SYNMO15061 1565 aa19.19■□□□□ 0.66
COL4A2-210ENST00000617564 WASHC2CQ9Y4E1 1318 aa19.19■□□□□ 0.66
COL4A2-210ENST00000617564 MED14O60244 1454 aa19.18■□□□□ 0.66
COL4A2-210ENST00000617564 FBXO31Q5XUX0 539 aaPredicted RBP19.18■□□□□ 0.66
COL4A2-210ENST00000617564 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
COL4A2-210ENST00000617564 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
COL4A2-210ENST00000617564 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
COL4A2-210ENST00000617564 TSPY4P0CV99 314 aa19.16■□□□□ 0.66
COL4A2-210ENST00000617564 TSPY10P0CW01 314 aa19.16■□□□□ 0.66
COL4A2-210ENST00000617564 DEPDC5O75140 1603 aa19.15■□□□□ 0.66
COL4A2-210ENST00000617564 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
COL4A2-210ENST00000617564 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
COL4A2-210ENST00000617564 THEMISQ8N1K5 641 aaPredicted RBP19.15■□□□□ 0.66
COL4A2-210ENST00000617564 UGGT1Q9NYU2 1555 aa19.15■□□□□ 0.66
COL4A2-210ENST00000617564 IQGAP1P46940 1657 aa19.14■□□□□ 0.66
COL4A2-210ENST00000617564 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
COL4A2-210ENST00000617564 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
COL4A2-210ENST00000617564 EIF2AK4Q9P2K8 1649 aaKnown RBP19.13■□□□□ 0.65
COL4A2-210ENST00000617564 ABCC3O15438 1527 aa19.12■□□□□ 0.65
COL4A2-210ENST00000617564 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
COL4A2-210ENST00000617564 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
COL4A2-210ENST00000617564 ERVK-7P63135 1459 aa19.08■□□□□ 0.64
COL4A2-210ENST00000617564 MROH1Q8NDA8 1641 aa19.07■□□□□ 0.64
COL4A2-210ENST00000617564 MYOM3Q5VTT5 1437 aa19.06■□□□□ 0.64
COL4A2-210ENST00000617564 DUOX2Q9NRD8 1548 aa19.04■□□□□ 0.64
COL4A2-210ENST00000617564 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
COL4A2-210ENST00000617564 CEP152O94986 1710 aa19■□□□□ 0.63
COL4A2-210ENST00000617564 XIRP1Q702N8 1843 aaKnown RBP19■□□□□ 0.63
COL4A2-210ENST00000617564 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
COL4A2-210ENST00000617564 ARHGAP31Q2M1Z3 1444 aa19■□□□□ 0.63
COL4A2-210ENST00000617564 UBR1Q8IWV7 1749 aa18.99■□□□□ 0.63
COL4A2-210ENST00000617564 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
COL4A2-210ENST00000617564 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
COL4A2-210ENST00000617564 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
COL4A2-210ENST00000617564 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
COL4A2-210ENST00000617564 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
COL4A2-210ENST00000617564 KIF15Q9NS87 1388 aa18.96■□□□□ 0.63
COL4A2-210ENST00000617564 SLIT1O75093 1534 aa18.96■□□□□ 0.63
COL4A2-210ENST00000617564 CROCC2H7BZ55 1655 aa18.96■□□□□ 0.63
COL4A2-210ENST00000617564 ZNF772Q68DY9 489 aaPredicted RBP18.96■□□□□ 0.63
COL4A2-210ENST00000617564 MSH5O43196 834 aa18.95■□□□□ 0.62
COL4A2-210ENST00000617564 JCADQ9P266 1359 aa18.94■□□□□ 0.62
COL4A2-210ENST00000617564 ABCC5O15440 1437 aa18.92■□□□□ 0.62
COL4A2-210ENST00000617564 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
COL4A2-210ENST00000617564 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
COL4A2-210ENST00000617564 RXRBP28702 533 aa18.9■□□□□ 0.62
COL4A2-210ENST00000617564 PHLPP1O60346 1717 aa18.89■□□□□ 0.61
COL4A2-210ENST00000617564 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
COL4A2-210ENST00000617564 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
COL4A2-210ENST00000617564 DAPK1P53355 1430 aa18.89■□□□□ 0.61
COL4A2-210ENST00000617564 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
COL4A2-210ENST00000617564 KANK1Q14678 1352 aa18.88■□□□□ 0.61
COL4A2-210ENST00000617564 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
COL4A2-210ENST00000617564 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
COL4A2-210ENST00000617564 PIK3C2BO00750 1634 aa18.87■□□□□ 0.61
COL4A2-210ENST00000617564 LTKP29376 864 aa18.87■□□□□ 0.61
COL4A2-210ENST00000617564 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
COL4A2-210ENST00000617564 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
COL4A2-210ENST00000617564 LRP6O75581 1613 aa18.86■□□□□ 0.61
COL4A2-210ENST00000617564 CDK12Q9NYV4 1490 aaPredicted RBP18.86■□□□□ 0.61
COL4A2-210ENST00000617564 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
COL4A2-210ENST00000617564 TMEM2Q9UHN6 1383 aa18.86■□□□□ 0.61
COL4A2-210ENST00000617564 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
COL4A2-210ENST00000617564 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
COL4A2-210ENST00000617564 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
COL4A2-210ENST00000617564 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms